RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 LGR6Q9HBX8 967 aa27.79■■■□□ 2.04
LIMD2-202ENST00000578061 TAF1LQ8IZX4 1826 aa27.78■■■□□ 2.04
LIMD2-202ENST00000578061 SMIM5Q71RC9 77 aa27.78■■■□□ 2.04
LIMD2-202ENST00000578061 AK7Q96M32 723 aa27.78■■■□□ 2.04
LIMD2-202ENST00000578061 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
LIMD2-202ENST00000578061 SLC16A10Q8TF71 515 aa27.77■■■□□ 2.04
LIMD2-202ENST00000578061 C4BP0C0L5 1744 aa27.76■■■□□ 2.03
LIMD2-202ENST00000578061 AMIGO3Q86WK7 504 aa27.76■■■□□ 2.03
LIMD2-202ENST00000578061 SLC4A9Q96Q91 983 aa27.75■■■□□ 2.03
LIMD2-202ENST00000578061 RNMTO43148 476 aaKnown RBP27.74■■■□□ 2.03
LIMD2-202ENST00000578061 PHF14O94880 888 aa27.74■■■□□ 2.03
LIMD2-202ENST00000578061 HMGB2P26583 209 aaKnown RBP27.74■■■□□ 2.03
LIMD2-202ENST00000578061 ARXQ96QS3 562 aa27.74■■■□□ 2.03
LIMD2-202ENST00000578061 NUDCQ9Y266 331 aa27.74■■■□□ 2.03
LIMD2-202ENST00000578061 FHDC1Q9C0D6 1143 aaPredicted RBP27.73■■■□□ 2.03
LIMD2-202ENST00000578061 PTCD1O75127 700 aaKnown RBP27.72■■■□□ 2.03
LIMD2-202ENST00000578061 U2AF1L5P0DN76 240 aaPredicted RBP27.72■■■□□ 2.03
LIMD2-202ENST00000578061 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
LIMD2-202ENST00000578061 U2AF1Q01081 240 aaKnown RBP eCLIP27.72■■■□□ 2.03
LIMD2-202ENST00000578061 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
LIMD2-202ENST00000578061 SCN11AQ9UI33 1791 aa27.71■■■□□ 2.03
LIMD2-202ENST00000578061 RSPH6AQ9H0K4 717 aa27.71■■■□□ 2.03
LIMD2-202ENST00000578061 SLC52A2Q9HAB3 445 aa27.71■■■□□ 2.03
LIMD2-202ENST00000578061 POLD1P28340 1107 aa27.7■■■□□ 2.02
LIMD2-202ENST00000578061 PHACTR3Q96KR7 559 aa27.7■■■□□ 2.02
LIMD2-202ENST00000578061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.69■■■□□ 2.02
LIMD2-202ENST00000578061 GNPATO15228 680 aa27.69■■■□□ 2.02
LIMD2-202ENST00000578061 FLAD1Q8NFF5 587 aa27.69■■■□□ 2.02
LIMD2-202ENST00000578061 KLHL34Q8N239 644 aa27.68■■■□□ 2.02
LIMD2-202ENST00000578061 GAS2L2Q8NHY3 880 aa27.68■■■□□ 2.02
LIMD2-202ENST00000578061 SYT17Q9BSW7 474 aa27.67■■■□□ 2.02
LIMD2-202ENST00000578061 MAP3K5Q99683 1374 aa27.66■■■□□ 2.02
LIMD2-202ENST00000578061 SLC39A6Q13433 755 aa27.66■■■□□ 2.02
LIMD2-202ENST00000578061 GNAT3A8MTJ3 354 aa27.65■■■□□ 2.02
LIMD2-202ENST00000578061 UBR3Q6ZT12 1888 aa27.65■■■□□ 2.02
LIMD2-202ENST00000578061 SSFA2P28290 1259 aa27.64■■■□□ 2.02
LIMD2-202ENST00000578061 MRC1P22897 1456 aa27.64■■■□□ 2.01
LIMD2-202ENST00000578061 IL17REQ8NFR9 667 aa27.63■■■□□ 2.01
LIMD2-202ENST00000578061 ADAMTS7Q9UKP4 1686 aa27.62■■■□□ 2.01
LIMD2-202ENST00000578061 COL24A1Q17RW2 1714 aa27.61■■■□□ 2.01
LIMD2-202ENST00000578061 FCHSD2O94868 740 aa27.61■■■□□ 2.01
LIMD2-202ENST00000578061 VIRMAQ69YN4 1812 aaKnown RBP27.61■■■□□ 2.01
LIMD2-202ENST00000578061 ZNF831Q5JPB2 1677 aa27.6■■■□□ 2.01
LIMD2-202ENST00000578061 ZEB1P37275 1124 aaPredicted RBP27.6■■■□□ 2.01
LIMD2-202ENST00000578061 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
LIMD2-202ENST00000578061 RALBP1Q15311 655 aa27.59■■■□□ 2.01
LIMD2-202ENST00000578061 CNTNAP4Q9C0A0 1308 aa27.59■■■□□ 2.01
LIMD2-202ENST00000578061 TEFQ10587 303 aa27.58■■■□□ 2.01
LIMD2-202ENST00000578061 RC3H1Q5TC82 1133 aaKnown RBP27.58■■■□□ 2.01
LIMD2-202ENST00000578061 DNAJC10Q8IXB1 793 aa27.58■■■□□ 2.01
LIMD2-202ENST00000578061 COL5A3P25940 1745 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-202ENST00000578061 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
LIMD2-202ENST00000578061 CRKLP46109 303 aaKnown RBP27.57■■■□□ 2
LIMD2-202ENST00000578061 TRAPPC3LQ5T215 181 aa27.57■■■□□ 2
LIMD2-202ENST00000578061 TJP1Q07157 1748 aa27.55■■■□□ 2
LIMD2-202ENST00000578061 RPS6KA4O75676 772 aa27.55■■■□□ 2
LIMD2-202ENST00000578061 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
LIMD2-202ENST00000578061 ARHGEF1Q92888 912 aaKnown RBP27.54■■■□□ 2
LIMD2-202ENST00000578061 MCM10Q7L590 875 aa27.53■■■□□ 2
LIMD2-202ENST00000578061 TTC5Q8N0Z6 440 aa27.53■■■□□ 2
LIMD2-202ENST00000578061 NLGN2Q8NFZ4 835 aa27.53■■■□□ 2
LIMD2-202ENST00000578061 MYH14Q7Z406 1995 aaKnown RBP27.52■■■□□ 2
LIMD2-202ENST00000578061 CEMIPQ8WUJ3 1361 aa27.51■■□□□ 1.99
LIMD2-202ENST00000578061 DCTN1Q14203 1278 aa27.51■■□□□ 1.99
LIMD2-202ENST00000578061 INTS5Q6P9B9 1019 aaKnown RBP27.51■■□□□ 1.99
LIMD2-202ENST00000578061 RTF1Q92541 710 aaKnown RBP27.51■■□□□ 1.99
LIMD2-202ENST00000578061 RFC4P35249 363 aa27.5■■□□□ 1.99
LIMD2-202ENST00000578061 MYBBP1AQ9BQG0 1328 aaKnown RBP27.49■■□□□ 1.99
LIMD2-202ENST00000578061 CYP19A1P11511 503 aaPredicted RBP27.49■■□□□ 1.99
LIMD2-202ENST00000578061 ADRA2BP18089 450 aa27.49■■□□□ 1.99
LIMD2-202ENST00000578061 ZNF790Q6PG37 636 aa27.49■■□□□ 1.99
LIMD2-202ENST00000578061 CCDC87Q9NVE4 849 aa27.49■■□□□ 1.99
LIMD2-202ENST00000578061 KCNQ3O43525 872 aa27.48■■□□□ 1.99
LIMD2-202ENST00000578061 NEFMP07197 916 aa27.48■■□□□ 1.99
LIMD2-202ENST00000578061 ZNF496Q96IT1 587 aaPredicted RBP27.48■■□□□ 1.99
LIMD2-202ENST00000578061 CICQ96RK0 1608 aaPredicted RBP27.48■■□□□ 1.99
LIMD2-202ENST00000578061 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
LIMD2-202ENST00000578061 SIPA1L3O60292 1781 aaPredicted RBP27.46■■□□□ 1.99
LIMD2-202ENST00000578061 BTBD11A6QL63 1104 aa27.46■■□□□ 1.99
LIMD2-202ENST00000578061 MMP10P09238 476 aa27.46■■□□□ 1.99
LIMD2-202ENST00000578061 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
LIMD2-202ENST00000578061 VSIG10Q8N0Z9 540 aa27.46■■□□□ 1.99
LIMD2-202ENST00000578061 SRP68Q9UHB9 627 aaKnown RBP27.46■■□□□ 1.99
LIMD2-202ENST00000578061 UBR2Q8IWV8 1755 aa27.45■■□□□ 1.99
LIMD2-202ENST00000578061 GYS1P13807 737 aa27.45■■□□□ 1.98
LIMD2-202ENST00000578061 ZBTB1Q9Y2K1 713 aa27.44■■□□□ 1.98
LIMD2-202ENST00000578061 GPR162Q16538 588 aa27.43■■□□□ 1.98
LIMD2-202ENST00000578061 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
LIMD2-202ENST00000578061 MAPK8IP3Q9UPT6 1336 aa27.42■■□□□ 1.98
LIMD2-202ENST00000578061 HTATSF1O43719 755 aaKnown RBP27.42■■□□□ 1.98
LIMD2-202ENST00000578061 CD2APQ9Y5K6 639 aa27.42■■□□□ 1.98
LIMD2-202ENST00000578061 HEG1Q9ULI3 1381 aa27.42■■□□□ 1.98
LIMD2-202ENST00000578061 SOS1Q07889 1333 aaPredicted RBP27.41■■□□□ 1.98
LIMD2-202ENST00000578061 C4AP0C0L4 1744 aa27.41■■□□□ 1.98
LIMD2-202ENST00000578061 CANXP27824 592 aaKnown RBP27.41■■□□□ 1.98
LIMD2-202ENST00000578061 FMNL2Q96PY5 1086 aa27.41■■□□□ 1.98
LIMD2-202ENST00000578061 PRKRIP1Q9H875 184 aaPredicted RBP27.41■■□□□ 1.98
LIMD2-202ENST00000578061 NFE2L2Q16236 605 aa27.4■■□□□ 1.98
LIMD2-202ENST00000578061 PNNQ9H307 717 aaKnown RBP27.4■■□□□ 1.98
LIMD2-202ENST00000578061 USP42Q9H9J4 1324 aaKnown RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms