RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PIGBQ92521 554 aa16.68■□□□□ 0.26
MKS1-206ENST00000577824 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
MKS1-206ENST00000577824 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
MKS1-206ENST00000577824 RREB1Q92766 1687 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 TRIM37O94972 964 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 CABP4P57796 275 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
MKS1-206ENST00000577824 TEFQ10587 303 aa16.66■□□□□ 0.26
MKS1-206ENST00000577824 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
MKS1-206ENST00000577824 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
MKS1-206ENST00000577824 IL16Q14005 1332 aa16.66■□□□□ 0.26
MKS1-206ENST00000577824 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
MKS1-206ENST00000577824 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
MKS1-206ENST00000577824 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
MKS1-206ENST00000577824 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
MKS1-206ENST00000577824 PLSCR1O15162 318 aa16.63■□□□□ 0.25
MKS1-206ENST00000577824 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
MKS1-206ENST00000577824 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
MKS1-206ENST00000577824 WDR63Q8IWG1 891 aa16.63■□□□□ 0.25
MKS1-206ENST00000577824 UPF1Q92900 1129 aaKnown RBP eCLIP16.63■□□□□ 0.25
MKS1-206ENST00000577824 TJP1Q07157 1748 aa16.62■□□□□ 0.25
MKS1-206ENST00000577824 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
MKS1-206ENST00000577824 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
MKS1-206ENST00000577824 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
MKS1-206ENST00000577824 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
MKS1-206ENST00000577824 CHL1O00533 1208 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 C5P01031 1676 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
MKS1-206ENST00000577824 COL5A3P25940 1745 aaPredicted RBP16.6■□□□□ 0.25
MKS1-206ENST00000577824 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
MKS1-206ENST00000577824 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
MKS1-206ENST00000577824 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
MKS1-206ENST00000577824 APBA3O96018 575 aa16.59■□□□□ 0.25
MKS1-206ENST00000577824 GNAI1P63096 354 aa16.59■□□□□ 0.25
MKS1-206ENST00000577824 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
MKS1-206ENST00000577824 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
MKS1-206ENST00000577824 CAMKK2Q96RR4 588 aa16.58■□□□□ 0.24
MKS1-206ENST00000577824 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
MKS1-206ENST00000577824 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
MKS1-206ENST00000577824 BAG6P46379 1132 aa16.57■□□□□ 0.24
MKS1-206ENST00000577824 SLC39A6Q13433 755 aa16.57■□□□□ 0.24
MKS1-206ENST00000577824 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
MKS1-206ENST00000577824 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
MKS1-206ENST00000577824 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
MKS1-206ENST00000577824 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
MKS1-206ENST00000577824 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
MKS1-206ENST00000577824 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
MKS1-206ENST00000577824 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
MKS1-206ENST00000577824 SIK1P57059 783 aa16.55■□□□□ 0.24
MKS1-206ENST00000577824 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
MKS1-206ENST00000577824 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
MKS1-206ENST00000577824 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
MKS1-206ENST00000577824 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
MKS1-206ENST00000577824 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
MKS1-206ENST00000577824 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
MKS1-206ENST00000577824 FANCIQ9NVI1 1328 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 E9PSI1 815 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 KCNQ3O43525 872 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 PROM2Q8N271 834 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
MKS1-206ENST00000577824 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
MKS1-206ENST00000577824 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
MKS1-206ENST00000577824 DEFB132Q7Z7B7 95 aa16.53■□□□□ 0.24
MKS1-206ENST00000577824 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
MKS1-206ENST00000577824 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
MKS1-206ENST00000577824 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
MKS1-206ENST00000577824 HOXB7P09629 217 aa16.52■□□□□ 0.24
MKS1-206ENST00000577824 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.24
MKS1-206ENST00000577824 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
MKS1-206ENST00000577824 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.24
MKS1-206ENST00000577824 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
MKS1-206ENST00000577824 QSER1Q2KHR3 1735 aa16.51■□□□□ 0.23
MKS1-206ENST00000577824 SOCS7O14512 581 aa16.51■□□□□ 0.23
MKS1-206ENST00000577824 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
MKS1-206ENST00000577824 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
MKS1-206ENST00000577824 ITPK1Q13572 414 aa16.51■□□□□ 0.23
MKS1-206ENST00000577824 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
MKS1-206ENST00000577824 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
MKS1-206ENST00000577824 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
MKS1-206ENST00000577824 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
MKS1-206ENST00000577824 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
MKS1-206ENST00000577824 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
MKS1-206ENST00000577824 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
MKS1-206ENST00000577824 DUSP27Q5VZP5 1158 aa16.49■□□□□ 0.23
MKS1-206ENST00000577824 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
MKS1-206ENST00000577824 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
MKS1-206ENST00000577824 CDCA7LQ96GN5 454 aa16.48■□□□□ 0.23
MKS1-206ENST00000577824 TUBGCP6Q96RT7 1819 aa16.47■□□□□ 0.23
MKS1-206ENST00000577824 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
MKS1-206ENST00000577824 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
MKS1-206ENST00000577824 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
MKS1-206ENST00000577824 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
MKS1-206ENST00000577824 KRT24Q2M2I5 525 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms