RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 C1orf141Q5JVX7 400 aa26.82■■□□□ 1.88
KRT18P55-201ENST00000577198 STK31Q9BXU1 1019 aa26.82■■□□□ 1.88
KRT18P55-201ENST00000577198 NLRP2Q9NX02 1062 aa26.82■■□□□ 1.88
KRT18P55-201ENST00000577198 MEGF6O75095 1541 aa26.81■■□□□ 1.88
KRT18P55-201ENST00000577198 ATP10DQ9P241 1426 aa26.81■■□□□ 1.88
KRT18P55-201ENST00000577198 TEFQ10587 303 aa26.8■■□□□ 1.88
KRT18P55-201ENST00000577198 FLIIQ13045 1269 aa26.8■■□□□ 1.88
KRT18P55-201ENST00000577198 ANP32EQ9BTT0 268 aa26.79■■□□□ 1.88
KRT18P55-201ENST00000577198 BTBD11A6QL63 1104 aa26.78■■□□□ 1.88
KRT18P55-201ENST00000577198 MEIS3Q99687 375 aa26.78■■□□□ 1.88
KRT18P55-201ENST00000577198 SEC24BO95487 1268 aa26.78■■□□□ 1.88
KRT18P55-201ENST00000577198 ABCA3Q99758 1704 aa26.77■■□□□ 1.88
KRT18P55-201ENST00000577198 N4BP2Q86UW6 1770 aaPredicted RBP26.77■■□□□ 1.88
KRT18P55-201ENST00000577198 GCC1Q96CN9 775 aa26.77■■□□□ 1.88
KRT18P55-201ENST00000577198 SCN11AQ9UI33 1791 aa26.76■■□□□ 1.87
KRT18P55-201ENST00000577198 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
KRT18P55-201ENST00000577198 HDGFL1Q5TGJ6 251 aa26.76■■□□□ 1.87
KRT18P55-201ENST00000577198 CHD1LQ86WJ1 897 aa26.76■■□□□ 1.87
KRT18P55-201ENST00000577198 RAPGEF4Q8WZA2 1011 aa26.76■■□□□ 1.87
KRT18P55-201ENST00000577198 LNPKQ9C0E8 428 aa26.75■■□□□ 1.87
KRT18P55-201ENST00000577198 SLC4A10Q6U841 1118 aa26.75■■□□□ 1.87
KRT18P55-201ENST00000577198 NOP58Q9Y2X3 529 aaKnown RBP26.75■■□□□ 1.87
KRT18P55-201ENST00000577198 KDM6AO15550 1401 aaPredicted RBP26.74■■□□□ 1.87
KRT18P55-201ENST00000577198 HEG1Q9ULI3 1381 aa26.74■■□□□ 1.87
KRT18P55-201ENST00000577198 HOXB7P09629 217 aa26.74■■□□□ 1.87
KRT18P55-201ENST00000577198 ANKRD44Q8N8A2 993 aa26.74■■□□□ 1.87
KRT18P55-201ENST00000577198 PKD1L3Q7Z443 1732 aa26.74■■□□□ 1.87
KRT18P55-201ENST00000577198 CSB-PGBD3P0DP91 1061 aa26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 CCT4P50991 539 aaKnown RBP26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 TATP17735 454 aaPredicted RBP26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 FKBP5Q13451 457 aaPredicted RBP26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 CEP85Q6P2H3 762 aa26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
KRT18P55-201ENST00000577198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.72■■□□□ 1.87
KRT18P55-201ENST00000577198 PHKG2P15735 406 aa26.71■■□□□ 1.87
KRT18P55-201ENST00000577198 EIF2S2P20042 333 aaKnown RBP26.71■■□□□ 1.87
KRT18P55-201ENST00000577198 ANKRD45Q5TZF3 282 aa26.71■■□□□ 1.87
KRT18P55-201ENST00000577198 DCTPP1Q9H773 170 aa26.7■■□□□ 1.86
KRT18P55-201ENST00000577198 PLEKHG2Q9H7P9 1386 aa26.7■■□□□ 1.86
KRT18P55-201ENST00000577198 RPAP2Q8IXW5 612 aaPredicted RBP26.69■■□□□ 1.86
KRT18P55-201ENST00000577198 CHPF2Q9P2E5 772 aa26.68■■□□□ 1.86
KRT18P55-201ENST00000577198 SPG7Q9UQ90 795 aa26.68■■□□□ 1.86
KRT18P55-201ENST00000577198 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
KRT18P55-201ENST00000577198 CYP27B1O15528 508 aa26.67■■□□□ 1.86
KRT18P55-201ENST00000577198 PRDM11Q9NQV5 511 aa26.67■■□□□ 1.86
KRT18P55-201ENST00000577198 GIGYF1O75420 1035 aaPredicted RBP26.67■■□□□ 1.86
KRT18P55-201ENST00000577198 ZBTB47Q9UFB7 747 aaPredicted RBP26.67■■□□□ 1.86
KRT18P55-201ENST00000577198 COL5A2P05997 1499 aaPredicted RBP26.66■■□□□ 1.86
KRT18P55-201ENST00000577198 PRAMEF22A3QJZ6 481 aa26.66■■□□□ 1.86
KRT18P55-201ENST00000577198 WDR17Q8IZU2 1322 aa26.65■■□□□ 1.86
KRT18P55-201ENST00000577198 ERICH6Q7L0X2 663 aa26.65■■□□□ 1.86
KRT18P55-201ENST00000577198 SLC52A2Q9HAB3 445 aa26.65■■□□□ 1.86
KRT18P55-201ENST00000577198 IFNL2Q8IZJ0 200 aa26.64■■□□□ 1.86
KRT18P55-201ENST00000577198 ANXA1P04083 346 aa26.64■■□□□ 1.85
KRT18P55-201ENST00000577198 MRC1P22897 1456 aa26.64■■□□□ 1.85
KRT18P55-201ENST00000577198 NFATC2IPQ8NCF5 419 aa26.61■■□□□ 1.85
KRT18P55-201ENST00000577198 C5P01031 1676 aa26.61■■□□□ 1.85
KRT18P55-201ENST00000577198 PARP4Q9UKK3 1724 aaKnown RBP26.61■■□□□ 1.85
KRT18P55-201ENST00000577198 SLC39A6Q13433 755 aa26.6■■□□□ 1.85
KRT18P55-201ENST00000577198 GNAI2P04899 355 aa26.6■■□□□ 1.85
KRT18P55-201ENST00000577198 PROSER3Q2NL68 480 aa26.6■■□□□ 1.85
KRT18P55-201ENST00000577198 ZNF790Q6PG37 636 aa26.6■■□□□ 1.85
KRT18P55-201ENST00000577198 USP44Q9H0E7 712 aa26.6■■□□□ 1.85
KRT18P55-201ENST00000577198 CHMP4AQ9BY43 222 aa26.59■■□□□ 1.85
KRT18P55-201ENST00000577198 DDRGK1Q96HY6 314 aa26.58■■□□□ 1.85
KRT18P55-201ENST00000577198 DCAF5Q96JK2 942 aa26.58■■□□□ 1.85
KRT18P55-201ENST00000577198 ADCY9O60503 1353 aa26.58■■□□□ 1.85
KRT18P55-201ENST00000577198 DBF4Q9UBU7 674 aaPredicted RBP26.58■■□□□ 1.85
KRT18P55-201ENST00000577198 GNAI3P08754 354 aa26.57■■□□□ 1.84
KRT18P55-201ENST00000577198 TOM1L2Q6ZVM7 507 aa26.57■■□□□ 1.84
KRT18P55-201ENST00000577198 PI4KAP2A4QPH2 592 aa26.57■■□□□ 1.84
KRT18P55-201ENST00000577198 BMP2KLQ5H9B9 411 aa26.57■■□□□ 1.84
KRT18P55-201ENST00000577198 PI4KAP1Q8N8J0 262 aa26.57■■□□□ 1.84
KRT18P55-201ENST00000577198 SHANK3Q9BYB0 1731 aa26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 BEND3Q5T5X7 828 aa26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 PLEKHM2Q8IWE5 1019 aa26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 C16orf71Q8IYS4 520 aaPredicted RBP26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 DNAAF4Q8WXU2 420 aa26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 ROBO1Q9Y6N7 1651 aa26.55■■□□□ 1.84
KRT18P55-201ENST00000577198 PDIA6Q15084 440 aa26.54■■□□□ 1.84
KRT18P55-201ENST00000577198 LARP1Q6PKG0 1096 aaKnown RBP26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 TBC1D32Q96NH3 1257 aa26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 CARD10Q9BWT7 1032 aa26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 PNMA6EA0A0J9YXQ4 647 aa26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 SRCIN1Q9C0H9 1055 aa26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 LRRFIP2Q9Y608 721 aaKnown RBP26.53■■□□□ 1.84
KRT18P55-201ENST00000577198 GLI3P10071 1580 aa26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 SMARCA5O60264 1052 aaPredicted RBP26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 HMMRO75330 724 aa26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 ATP8B2P98198 1209 aa26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 ZNF496Q96IT1 587 aaPredicted RBP26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 LTBP4Q8N2S1 1624 aa26.52■■□□□ 1.84
KRT18P55-201ENST00000577198 HSP90AB1P08238 724 aaKnown RBP26.51■■□□□ 1.83
KRT18P55-201ENST00000577198 OTUD7AQ8TE49 926 aaPredicted RBP26.51■■□□□ 1.83
KRT18P55-201ENST00000577198 ZCRB1Q8TBF4 217 aaKnown RBP26.5■■□□□ 1.83
KRT18P55-201ENST00000577198 STRN4Q9NRL3 753 aa26.5■■□□□ 1.83
KRT18P55-201ENST00000577198 SLC4A3P48751 1232 aa26.49■■□□□ 1.83
KRT18P55-201ENST00000577198 GSPT1P15170 499 aaKnown RBP26.49■■□□□ 1.83
KRT18P55-201ENST00000577198 DDX21Q9NR30 783 aaKnown RBP eCLIP26.49■■□□□ 1.83
KRT18P55-201ENST00000577198 PCDH11XQ9BZA7 1347 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms