RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 KCNQ4P56696 695 aa13.02□□□□□ -0.33
NDE1-212ENST00000577101 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
NDE1-212ENST00000577101 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
NDE1-212ENST00000577101 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
NDE1-212ENST00000577101 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
NDE1-212ENST00000577101 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
NDE1-212ENST00000577101 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
NDE1-212ENST00000577101 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
NDE1-212ENST00000577101 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
NDE1-212ENST00000577101 MCM10Q7L590 875 aa13.01□□□□□ -0.33
NDE1-212ENST00000577101 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
NDE1-212ENST00000577101 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
NDE1-212ENST00000577101 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
NDE1-212ENST00000577101 PALLDQ8WX93 1383 aa13□□□□□ -0.33
NDE1-212ENST00000577101 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
NDE1-212ENST00000577101 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
NDE1-212ENST00000577101 TXNRD1Q16881 649 aa13□□□□□ -0.33
NDE1-212ENST00000577101 RUNDC1Q96C34 613 aa13□□□□□ -0.33
NDE1-212ENST00000577101 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
NDE1-212ENST00000577101 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
NDE1-212ENST00000577101 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
NDE1-212ENST00000577101 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
NDE1-212ENST00000577101 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
NDE1-212ENST00000577101 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
NDE1-212ENST00000577101 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
NDE1-212ENST00000577101 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
NDE1-212ENST00000577101 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
NDE1-212ENST00000577101 KCNQ3O43525 872 aa12.98□□□□□ -0.33
NDE1-212ENST00000577101 CABP4P57796 275 aa12.98□□□□□ -0.33
NDE1-212ENST00000577101 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
NDE1-212ENST00000577101 APAF1O14727 1248 aa12.97□□□□□ -0.33
NDE1-212ENST00000577101 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
NDE1-212ENST00000577101 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
NDE1-212ENST00000577101 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
NDE1-212ENST00000577101 RIPK4P57078 832 aa12.96□□□□□ -0.33
NDE1-212ENST00000577101 ITPK1Q13572 414 aa12.96□□□□□ -0.33
NDE1-212ENST00000577101 ZNF827Q17R98 1081 aa12.96□□□□□ -0.33
NDE1-212ENST00000577101 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
NDE1-212ENST00000577101 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
NDE1-212ENST00000577101 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
NDE1-212ENST00000577101 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 SIK1P57059 783 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
NDE1-212ENST00000577101 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
NDE1-212ENST00000577101 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
NDE1-212ENST00000577101 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
NDE1-212ENST00000577101 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
NDE1-212ENST00000577101 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
NDE1-212ENST00000577101 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
NDE1-212ENST00000577101 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
NDE1-212ENST00000577101 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
NDE1-212ENST00000577101 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
NDE1-212ENST00000577101 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
NDE1-212ENST00000577101 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
NDE1-212ENST00000577101 PTCD1O75127 700 aaKnown RBP12.91□□□□□ -0.34
NDE1-212ENST00000577101 TEFQ10587 303 aa12.91□□□□□ -0.34
NDE1-212ENST00000577101 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
NDE1-212ENST00000577101 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
NDE1-212ENST00000577101 ZNF496Q96IT1 587 aaPredicted RBP12.91□□□□□ -0.34
NDE1-212ENST00000577101 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
NDE1-212ENST00000577101 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
NDE1-212ENST00000577101 NEFMP07197 916 aa12.9□□□□□ -0.34
NDE1-212ENST00000577101 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
NDE1-212ENST00000577101 SLC15A2Q16348 729 aa12.9□□□□□ -0.34
NDE1-212ENST00000577101 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
NDE1-212ENST00000577101 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
NDE1-212ENST00000577101 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
NDE1-212ENST00000577101 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
NDE1-212ENST00000577101 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
NDE1-212ENST00000577101 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
NDE1-212ENST00000577101 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
NDE1-212ENST00000577101 CHL1O00533 1208 aa12.87□□□□□ -0.35
NDE1-212ENST00000577101 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
NDE1-212ENST00000577101 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
NDE1-212ENST00000577101 KRT24Q2M2I5 525 aa12.87□□□□□ -0.35
NDE1-212ENST00000577101 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
NDE1-212ENST00000577101 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
NDE1-212ENST00000577101 CYP19A1P11511 503 aaPredicted RBP12.86□□□□□ -0.35
NDE1-212ENST00000577101 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
NDE1-212ENST00000577101 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
NDE1-212ENST00000577101 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
NDE1-212ENST00000577101 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
NDE1-212ENST00000577101 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
NDE1-212ENST00000577101 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
NDE1-212ENST00000577101 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
NDE1-212ENST00000577101 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
NDE1-212ENST00000577101 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
NDE1-212ENST00000577101 COL23A1Q86Y22 540 aaPredicted RBP12.84□□□□□ -0.35
NDE1-212ENST00000577101 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
NDE1-212ENST00000577101 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
NDE1-212ENST00000577101 LRP5O75197 1615 aa12.84□□□□□ -0.35
NDE1-212ENST00000577101 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
NDE1-212ENST00000577101 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms