RNA–Protein interactions for RNA: ENST00000576972.5

EDC4-212, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-212ENST00000576972 DCAF8L1A6NGE4 600 aa20.79■□□□□ 0.92
EDC4-212ENST00000576972 PHF14O94880 888 aa20.79■□□□□ 0.92
EDC4-212ENST00000576972 ARXQ96QS3 562 aa20.79■□□□□ 0.92
EDC4-212ENST00000576972 COL3A1P02461 1466 aaPredicted RBP20.79■□□□□ 0.92
EDC4-212ENST00000576972 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
EDC4-212ENST00000576972 FLAD1Q8NFF5 587 aa20.78■□□□□ 0.92
EDC4-212ENST00000576972 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
EDC4-212ENST00000576972 PTCD1O75127 700 aaKnown RBP20.77■□□□□ 0.92
EDC4-212ENST00000576972 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
EDC4-212ENST00000576972 ITPK1Q13572 414 aa20.77■□□□□ 0.92
EDC4-212ENST00000576972 MSL1Q68DK7 614 aa20.77■□□□□ 0.92
EDC4-212ENST00000576972 FHDC1Q9C0D6 1143 aaPredicted RBP20.77■□□□□ 0.92
EDC4-212ENST00000576972 LGR6Q9HBX8 967 aa20.77■□□□□ 0.92
EDC4-212ENST00000576972 QSER1Q2KHR3 1735 aa20.76■□□□□ 0.91
EDC4-212ENST00000576972 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
EDC4-212ENST00000576972 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
EDC4-212ENST00000576972 SMIM5Q71RC9 77 aa20.76■□□□□ 0.91
EDC4-212ENST00000576972 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
EDC4-212ENST00000576972 GNPATO15228 680 aa20.75■□□□□ 0.91
EDC4-212ENST00000576972 RNMTO43148 476 aaKnown RBP20.75■□□□□ 0.91
EDC4-212ENST00000576972 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
EDC4-212ENST00000576972 TAF1LQ8IZX4 1826 aa20.75■□□□□ 0.91
EDC4-212ENST00000576972 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
EDC4-212ENST00000576972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
EDC4-212ENST00000576972 GAS2L2Q8NHY3 880 aa20.73■□□□□ 0.91
EDC4-212ENST00000576972 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
EDC4-212ENST00000576972 SLC4A9Q96Q91 983 aa20.72■□□□□ 0.91
EDC4-212ENST00000576972 SYT17Q9BSW7 474 aa20.72■□□□□ 0.91
EDC4-212ENST00000576972 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
EDC4-212ENST00000576972 SCN11AQ9UI33 1791 aa20.7■□□□□ 0.9
EDC4-212ENST00000576972 GNAT3A8MTJ3 354 aa20.7■□□□□ 0.9
EDC4-212ENST00000576972 SSFA2P28290 1259 aa20.7■□□□□ 0.9
EDC4-212ENST00000576972 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
EDC4-212ENST00000576972 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
EDC4-212ENST00000576972 TEFQ10587 303 aa20.69■□□□□ 0.9
EDC4-212ENST00000576972 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
EDC4-212ENST00000576972 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
EDC4-212ENST00000576972 MAP3K5Q99683 1374 aa20.69■□□□□ 0.9
EDC4-212ENST00000576972 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
EDC4-212ENST00000576972 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
EDC4-212ENST00000576972 FCHSD2O94868 740 aa20.66■□□□□ 0.9
EDC4-212ENST00000576972 NEFMP07197 916 aa20.66■□□□□ 0.9
EDC4-212ENST00000576972 RALBP1Q15311 655 aa20.65■□□□□ 0.9
EDC4-212ENST00000576972 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
EDC4-212ENST00000576972 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
EDC4-212ENST00000576972 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.9
EDC4-212ENST00000576972 CNTNAP4Q9C0A0 1308 aa20.64■□□□□ 0.89
EDC4-212ENST00000576972 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
EDC4-212ENST00000576972 IL17REQ8NFR9 667 aa20.64■□□□□ 0.89
EDC4-212ENST00000576972 RTF1Q92541 710 aaKnown RBP20.64■□□□□ 0.89
EDC4-212ENST00000576972 RPS6KA4O75676 772 aa20.63■□□□□ 0.89
EDC4-212ENST00000576972 CRKLP46109 303 aaKnown RBP20.63■□□□□ 0.89
EDC4-212ENST00000576972 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
EDC4-212ENST00000576972 RFC4P35249 363 aa20.62■□□□□ 0.89
EDC4-212ENST00000576972 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
EDC4-212ENST00000576972 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
EDC4-212ENST00000576972 MRC1P22897 1456 aa20.62■□□□□ 0.89
EDC4-212ENST00000576972 ZNF831Q5JPB2 1677 aa20.61■□□□□ 0.89
EDC4-212ENST00000576972 GPR162Q16538 588 aa20.6■□□□□ 0.89
EDC4-212ENST00000576972 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
EDC4-212ENST00000576972 ADRA2BP18089 450 aa20.59■□□□□ 0.89
EDC4-212ENST00000576972 MCM10Q7L590 875 aa20.59■□□□□ 0.89
EDC4-212ENST00000576972 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.89
EDC4-212ENST00000576972 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.89
EDC4-212ENST00000576972 BTBD11A6QL63 1104 aa20.58■□□□□ 0.89
EDC4-212ENST00000576972 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
EDC4-212ENST00000576972 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.88
EDC4-212ENST00000576972 TJP1Q07157 1748 aa20.57■□□□□ 0.88
EDC4-212ENST00000576972 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
EDC4-212ENST00000576972 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
EDC4-212ENST00000576972 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
EDC4-212ENST00000576972 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
EDC4-212ENST00000576972 UTRNP46939 3433 aa20.57■□□□□ 0.88
EDC4-212ENST00000576972 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
EDC4-212ENST00000576972 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
EDC4-212ENST00000576972 MMP10P09238 476 aa20.56■□□□□ 0.88
EDC4-212ENST00000576972 CYP19A1P11511 503 aaPredicted RBP20.56■□□□□ 0.88
EDC4-212ENST00000576972 YY1P25490 414 aa20.56■□□□□ 0.88
EDC4-212ENST00000576972 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
EDC4-212ENST00000576972 KCPQ6ZWJ8 1503 aa20.55■□□□□ 0.88
EDC4-212ENST00000576972 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
EDC4-212ENST00000576972 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
EDC4-212ENST00000576972 SRP68Q9UHB9 627 aaKnown RBP20.55■□□□□ 0.88
EDC4-212ENST00000576972 STARD3NLO95772 234 aa20.54■□□□□ 0.88
EDC4-212ENST00000576972 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
EDC4-212ENST00000576972 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
EDC4-212ENST00000576972 CD2APQ9Y5K6 639 aa20.54■□□□□ 0.88
EDC4-212ENST00000576972 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
EDC4-212ENST00000576972 GYS1P13807 737 aa20.53■□□□□ 0.88
EDC4-212ENST00000576972 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
EDC4-212ENST00000576972 CHD4Q14839 1912 aa20.53■□□□□ 0.88
EDC4-212ENST00000576972 KCNQ3O43525 872 aa20.52■□□□□ 0.88
EDC4-212ENST00000576972 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
EDC4-212ENST00000576972 ZPR1O75312 459 aa20.52■□□□□ 0.88
EDC4-212ENST00000576972 ZBTB1Q9Y2K1 713 aa20.52■□□□□ 0.88
EDC4-212ENST00000576972 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.88
EDC4-212ENST00000576972 HEG1Q9ULI3 1381 aa20.51■□□□□ 0.87
EDC4-212ENST00000576972 TEX13AQ9BXU3 409 aaPredicted RBP20.51■□□□□ 0.87
EDC4-212ENST00000576972 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
EDC4-212ENST00000576972 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms