RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 TRAPPC3LQ5T215 181 aa10.57□□□□□ -0.72
RAB40B-210ENST00000576148 LINC00116Q8NCU8 138 aa10.57□□□□□ -0.72
RAB40B-210ENST00000576148 GCC1Q96CN9 775 aa10.57□□□□□ -0.72
RAB40B-210ENST00000576148 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
RAB40B-210ENST00000576148 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
RAB40B-210ENST00000576148 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
RAB40B-210ENST00000576148 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
RAB40B-210ENST00000576148 CHRNA5P30532 468 aa10.55□□□□□ -0.72
RAB40B-210ENST00000576148 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
RAB40B-210ENST00000576148 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
RAB40B-210ENST00000576148 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 SIK1P57059 783 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 DGKZQ13574 1117 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 IP6K1Q92551 441 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
RAB40B-210ENST00000576148 RTCBQ9Y3I0 505 aaKnown RBP10.54□□□□□ -0.72
RAB40B-210ENST00000576148 TAF1LQ8IZX4 1826 aa10.54□□□□□ -0.72
RAB40B-210ENST00000576148 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
RAB40B-210ENST00000576148 ABT1Q9ULW3 272 aaKnown RBP10.53□□□□□ -0.72
RAB40B-210ENST00000576148 CGNL1Q0VF96 1302 aa10.53□□□□□ -0.72
RAB40B-210ENST00000576148 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
RAB40B-210ENST00000576148 SBF1O95248 1867 aa10.53□□□□□ -0.72
RAB40B-210ENST00000576148 BRCA1P38398 1863 aaKnown RBP10.53□□□□□ -0.72
RAB40B-210ENST00000576148 VIRMAQ69YN4 1812 aaKnown RBP10.52□□□□□ -0.73
RAB40B-210ENST00000576148 ITGBL1O95965 494 aaPredicted RBP10.52□□□□□ -0.73
RAB40B-210ENST00000576148 GYS1P13807 737 aa10.52□□□□□ -0.73
RAB40B-210ENST00000576148 RFC4P35249 363 aa10.52□□□□□ -0.73
RAB40B-210ENST00000576148 ATP6V1AP38606 617 aa10.52□□□□□ -0.73
RAB40B-210ENST00000576148 SOX10P56693 466 aa10.52□□□□□ -0.73
RAB40B-210ENST00000576148 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
RAB40B-210ENST00000576148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.52□□□□□ -0.73
RAB40B-210ENST00000576148 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
RAB40B-210ENST00000576148 KTN1Q86UP2 1357 aaKnown RBP10.52□□□□□ -0.73
RAB40B-210ENST00000576148 IQCA1LA6NCM1 817 aa10.51□□□□□ -0.73
RAB40B-210ENST00000576148 ADRA2BP18089 450 aa10.51□□□□□ -0.73
RAB40B-210ENST00000576148 ITPK1Q13572 414 aa10.51□□□□□ -0.73
RAB40B-210ENST00000576148 ERFEQ4G0M1 354 aa10.51□□□□□ -0.73
RAB40B-210ENST00000576148 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
RAB40B-210ENST00000576148 ARHGEF1Q92888 912 aaKnown RBP10.51□□□□□ -0.73
RAB40B-210ENST00000576148 GPR101Q96P66 508 aaPredicted RBP10.51□□□□□ -0.73
RAB40B-210ENST00000576148 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 DLL1O00548 723 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 CA12O43570 354 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 ECE1P42892 770 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
RAB40B-210ENST00000576148 PIGBQ92521 554 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 EVC2Q86UK5 1308 aa10.5□□□□□ -0.73
RAB40B-210ENST00000576148 MEGF6O75095 1541 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 DDNO94850 711 aaPredicted RBP10.49□□□□□ -0.73
RAB40B-210ENST00000576148 GRM1Q13255 1194 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 HABP4Q5JVS0 413 aaKnown RBP10.49□□□□□ -0.73
RAB40B-210ENST00000576148 NME9Q86XW9 330 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 PCDH11XQ9BZA7 1347 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 PCDH11YQ9BZA8 1340 aa10.49□□□□□ -0.73
RAB40B-210ENST00000576148 NFKBIEO00221 500 aa10.48□□□□□ -0.73
RAB40B-210ENST00000576148 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
RAB40B-210ENST00000576148 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
RAB40B-210ENST00000576148 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-210ENST00000576148 TTLL6Q8N841 843 aa10.47□□□□□ -0.73
RAB40B-210ENST00000576148 TAF1DQ9H5J8 278 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-210ENST00000576148 MAP2K2P36507 400 aa10.46□□□□□ -0.73
RAB40B-210ENST00000576148 CNTROBQ8N137 903 aa10.46□□□□□ -0.73
RAB40B-210ENST00000576148 RPS6KA4O75676 772 aa10.45□□□□□ -0.74
RAB40B-210ENST00000576148 AMPHP49418 695 aa10.45□□□□□ -0.74
RAB40B-210ENST00000576148 DDR1Q08345 913 aa10.45□□□□□ -0.74
RAB40B-210ENST00000576148 RC3H1Q5TC82 1133 aaKnown RBP10.45□□□□□ -0.74
RAB40B-210ENST00000576148 CYP4F22Q6NT55 531 aa10.45□□□□□ -0.74
RAB40B-210ENST00000576148 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
RAB40B-210ENST00000576148 LTN1O94822 1766 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
RAB40B-210ENST00000576148 CD163L1Q9NR16 1453 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 CYP27B1O15528 508 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 HOXC9P31274 260 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 FKBP8Q14318 412 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 NBPF6Q5VWK0 638 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 USHBP1Q8N6Y0 703 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 NBPF4Q96M43 638 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 TMOD3Q9NYL9 352 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
RAB40B-210ENST00000576148 MAP1SQ66K74 1059 aaPredicted RBP10.43□□□□□ -0.74
RAB40B-210ENST00000576148 POLRMTO00411 1230 aaKnown RBP10.42□□□□□ -0.74
RAB40B-210ENST00000576148 PNMA8AQ86V59 439 aaPredicted RBP10.42□□□□□ -0.74
RAB40B-210ENST00000576148 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
RAB40B-210ENST00000576148 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.74
RAB40B-210ENST00000576148 HACL1Q9UJ83 578 aa10.42□□□□□ -0.74
RAB40B-210ENST00000576148 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 CNTNAP4Q9C0A0 1308 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 H0YIN7 160 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 AOC2O75106 756 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 EPHX2P34913 555 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 C2CD5Q86YS7 1000 aa10.41□□□□□ -0.74
RAB40B-210ENST00000576148 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
RAB40B-210ENST00000576148 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
RAB40B-210ENST00000576148 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.74
RAB40B-210ENST00000576148 TM4SF1P30408 202 aa10.4□□□□□ -0.74
RAB40B-210ENST00000576148 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 517 ms