RNA–Protein interactions for RNA: ENST00000575656.5

ARHGAP17-218, Transcript of Rho GTPase activating protein 17, human

TSL 3

Gene ARHGAP17, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP17-218	ENST00000575656	TGFB2	P61812	414 aa		13.52	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	SMARCC1	Q92922	1105 aa	Predicted RBP	13.52	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PUS7	Q96PZ0	661 aa	Known RBP	13.52	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PCDH11X	Q9BZA7	1347 aa		13.51	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PCDH11Y	Q9BZA8	1340 aa		13.51	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	CYP27B1	O15528	508 aa		13.51	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	TERF2IP	Q9NYB0	399 aa		13.51	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PLEKHG2	Q9H7P9	1386 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PITPNM1	O00562	1244 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PHF14	O94880	888 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	FBLN1	P23142	703 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	MPRIP	Q6WCQ1	1025 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	LINC00116	Q8NCU8	138 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PKD1L3	Q7Z443	1732 aa		13.5	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	MMP10	P09238	476 aa		13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	AMPH	P49418	695 aa		13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	NKX1-1	Q15270	411 aa	Predicted RBP	13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	TMC1	Q8TDI8	760 aa		13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	RAPGEF4	Q8WZA2	1011 aa		13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	PIGB	Q92521	554 aa		13.49	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	ARFGEF1	Q9Y6D6	1849 aa		13.48	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	USHBP1	Q8N6Y0	703 aa		13.48	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	COG3	Q96JB2	828 aa		13.48	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	NCAPD2	Q15021	1401 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	LOC102724428	A0A0B4J2F2	783 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656		A0A0G2JLW4	131 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	TAT	P17735	454 aa	Predicted RBP	13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	KCNA3	P22001	575 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	SIK1	P57059	783 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	ARHGAP27	Q6ZUM4	889 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	BCS1L	Q9Y276	419 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	KCP	Q6ZWJ8	1503 aa		13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.47	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	ITPK1	Q13572	414 aa		13.46	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	C9orf131	Q5VYM1	1079 aa		13.46	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.46	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	C4A	P0C0L4	1744 aa		13.46	□□□□□ -0.25
ARHGAP17-218	ENST00000575656	INSR	P06213	1382 aa		13.45	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SLC34A2	O95436	690 aa		13.45	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	DPEP1	P16444	411 aa		13.45	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	KDM2B	Q8NHM5	1336 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	ZNF831	Q5JPB2	1677 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	GNPAT	O15228	680 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	RRS1	Q15050	365 aa	Known RBP	13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	NLGN1	Q8N2Q7	840 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SSUH2	Q9Y2M2	353 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SMG6	Q86US8	1419 aa	Known RBP	13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	KIF24	Q5T7B8	1368 aa		13.44	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	FCHSD2	O94868	740 aa		13.43	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	DCAF5	Q96JK2	942 aa		13.43	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	CLEC11A	Q9Y240	323 aa		13.43	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	KDR	P35968	1356 aa		13.43	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	HSPA1A	P0DMV8	641 aa	Known RBP	13.42	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	HSPA1B	P0DMV9	641 aa	Known RBP	13.42	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	HSP90AB2P	Q58FF8	381 aa		13.42	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SMC1B	Q8NDV3	1235 aa		13.42	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	RRAGC	Q9HB90	399 aa		13.42	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	KDM6A	O15550	1401 aa	Predicted RBP	13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	FYB1	O15117	783 aa		13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	TMF1	P82094	1093 aa		13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	PIP4P2	Q8N4L2	257 aa		13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	ASAP1	Q9ULH1	1129 aa		13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SBF1	O95248	1867 aa		13.41	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	COL5A3	P25940	1745 aa	Predicted RBP	13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	GYS1	P13807	737 aa		13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	TESK2	Q96S53	571 aa		13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	SIN3A	Q96ST3	1273 aa		13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	CCDC87	Q9NVE4	849 aa		13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	FLT4	P35916	1363 aa		13.4	□□□□□ -0.26
ARHGAP17-218	ENST00000575656	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	ATP6V1A	P38606	617 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	TRAPPC3L	Q5T215	181 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	RC3H1	Q5TC82	1133 aa	Known RBP	13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	ARHGEF1	Q92888	912 aa	Known RBP	13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	SLC4A9	Q96Q91	983 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	CARD11	Q9BXL7	1154 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	ATG3	Q9NT62	314 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.39	□□□□□ -0.27	1e-7	■■□□□ 12.4
ARHGAP17-218	ENST00000575656	TONSL	Q96HA7	1378 aa		13.39	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	TMOD3	Q9NYL9	352 aa		13.38	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	RNF181	Q9P0P0	153 aa		13.38	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	PIM2	Q9P1W9	311 aa		13.38	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	RTCB	Q9Y3I0	505 aa	Known RBP	13.38	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	CNTNAP4	Q9C0A0	1308 aa		13.37	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	DALRD3	Q5D0E6	543 aa	Known RBP	13.36	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	GGNBP2	Q9H3C7	697 aa		13.36	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	SPG7	Q9UQ90	795 aa		13.36	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	ANKRD26	Q9UPS8	1709 aa		13.36	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	RPS6KA4	O75676	772 aa		13.35	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	FXR2	P51116	673 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	PARP3	Q9Y6F1	533 aa		13.35	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	VEGFA	P15692	232 aa	Predicted RBP	13.34	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	PHKG2	P15735	406 aa		13.34	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	MYH14	Q7Z406	1995 aa	Known RBP	13.34	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	ADAMTS7	Q9UKP4	1686 aa		13.34	□□□□□ -0.27
ARHGAP17-218	ENST00000575656	GLTPD2	A6NH11	291 aa		13.33	□□□□□ -0.28
ARHGAP17-218	ENST00000575656	POTEC	B2RU33	542 aa		13.33	□□□□□ -0.28
ARHGAP17-218	ENST00000575656	DDR1	Q08345	913 aa		13.33	□□□□□ -0.28

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