RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC1-207ENST00000575639 BTAF1O14981 1849 aa19.8■□□□□ 0.76
TRAPPC1-207ENST00000575639 RGPD3A6NKT7 1758 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC1-207ENST00000575639 RGPD4Q7Z3J3 1758 aa19.8■□□□□ 0.76
TRAPPC1-207ENST00000575639 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
TRAPPC1-207ENST00000575639 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
TRAPPC1-207ENST00000575639 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
TRAPPC1-207ENST00000575639 ATP6V1AP38606 617 aa19.78■□□□□ 0.76
TRAPPC1-207ENST00000575639 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
TRAPPC1-207ENST00000575639 RUNDC1Q96C34 613 aa19.77■□□□□ 0.76
TRAPPC1-207ENST00000575639 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
TRAPPC1-207ENST00000575639 PTCD1O75127 700 aaKnown RBP19.76■□□□□ 0.75
TRAPPC1-207ENST00000575639 MRS2Q9HD23 443 aa19.76■□□□□ 0.75
TRAPPC1-207ENST00000575639 RREB1Q92766 1687 aa19.75■□□□□ 0.75
TRAPPC1-207ENST00000575639 MCM10Q7L590 875 aa19.75■□□□□ 0.75
TRAPPC1-207ENST00000575639 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
TRAPPC1-207ENST00000575639 TTC5Q8N0Z6 440 aa19.75■□□□□ 0.75
TRAPPC1-207ENST00000575639 TOGARAM1Q9Y4F4 1720 aa19.75■□□□□ 0.75
TRAPPC1-207ENST00000575639 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
TRAPPC1-207ENST00000575639 ZNF827Q17R98 1081 aa19.74■□□□□ 0.75
TRAPPC1-207ENST00000575639 RIPK4P57078 832 aa19.73■□□□□ 0.75
TRAPPC1-207ENST00000575639 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
TRAPPC1-207ENST00000575639 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
TRAPPC1-207ENST00000575639 AK7Q96M32 723 aa19.73■□□□□ 0.75
TRAPPC1-207ENST00000575639 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
TRAPPC1-207ENST00000575639 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
TRAPPC1-207ENST00000575639 DCTN1Q14203 1278 aa19.72■□□□□ 0.75
TRAPPC1-207ENST00000575639 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
TRAPPC1-207ENST00000575639 NUP188Q5SRE5 1749 aa19.72■□□□□ 0.75
TRAPPC1-207ENST00000575639 ITPK1Q13572 414 aa19.71■□□□□ 0.75
TRAPPC1-207ENST00000575639 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
TRAPPC1-207ENST00000575639 LINC00116Q8NCU8 138 aa19.71■□□□□ 0.75
TRAPPC1-207ENST00000575639 FLAD1Q8NFF5 587 aa19.71■□□□□ 0.75
TRAPPC1-207ENST00000575639 MRC1P22897 1456 aa19.71■□□□□ 0.75
TRAPPC1-207ENST00000575639 SENP3-EIF4A1A0A087X0R7 540 aa19.7■□□□□ 0.74
TRAPPC1-207ENST00000575639 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC1-207ENST00000575639 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
TRAPPC1-207ENST00000575639 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
TRAPPC1-207ENST00000575639 NEUROD2Q15784 382 aa19.69■□□□□ 0.74
TRAPPC1-207ENST00000575639 ITGB4P16144 1822 aa19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 MSH5O43196 834 aa19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 VSIG10Q8N0Z9 540 aa19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 SPON1Q9HCB6 807 aa19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
TRAPPC1-207ENST00000575639 SLC16A10Q8TF71 515 aa19.67■□□□□ 0.74
TRAPPC1-207ENST00000575639 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
TRAPPC1-207ENST00000575639 PNPLA7Q6ZV29 1317 aa19.67■□□□□ 0.74
TRAPPC1-207ENST00000575639 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
TRAPPC1-207ENST00000575639 GNPATO15228 680 aa19.66■□□□□ 0.74
TRAPPC1-207ENST00000575639 TEX13AQ9BXU3 409 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC1-207ENST00000575639 PDGFDQ9GZP0 370 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC1-207ENST00000575639 LY75O60449 1722 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 SSFA2P28290 1259 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 THUMPD2Q9BTF0 503 aaKnown RBP19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 MTFR1LQ9H019 292 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 CNTNAP4Q9C0A0 1308 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 PAPPAQ13219 1627 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 ADAMTS7Q9UKP4 1686 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
TRAPPC1-207ENST00000575639 APAF1O14727 1248 aa19.64■□□□□ 0.73
TRAPPC1-207ENST00000575639 STARD3NLO95772 234 aa19.64■□□□□ 0.73
TRAPPC1-207ENST00000575639 DNAJC10Q8IXB1 793 aa19.64■□□□□ 0.73
TRAPPC1-207ENST00000575639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
TRAPPC1-207ENST00000575639 PHF14O94880 888 aa19.63■□□□□ 0.73
TRAPPC1-207ENST00000575639 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
TRAPPC1-207ENST00000575639 COL23A1Q86Y22 540 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC1-207ENST00000575639 KCNQ3O43525 872 aa19.62■□□□□ 0.73
TRAPPC1-207ENST00000575639 RPS6KA4O75676 772 aa19.62■□□□□ 0.73
TRAPPC1-207ENST00000575639 TRAPPC3LQ5T215 181 aa19.62■□□□□ 0.73
TRAPPC1-207ENST00000575639 MIS18AQ9NYP9 233 aa19.62■□□□□ 0.73
TRAPPC1-207ENST00000575639 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC1-207ENST00000575639 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 ADRA2BP18089 450 aa19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 PPP1R1BQ9UD71 204 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC1-207ENST00000575639 SNRPA1P09661 255 aaKnown RBP19.6■□□□□ 0.73
TRAPPC1-207ENST00000575639 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC1-207ENST00000575639 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
TRAPPC1-207ENST00000575639 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
TRAPPC1-207ENST00000575639 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
TRAPPC1-207ENST00000575639 CALD1Q05682 793 aaKnown RBP19.59■□□□□ 0.73
TRAPPC1-207ENST00000575639 KCPQ6ZWJ8 1503 aa19.58■□□□□ 0.73
TRAPPC1-207ENST00000575639 POLD1P28340 1107 aa19.58■□□□□ 0.72
TRAPPC1-207ENST00000575639 INTS5Q6P9B9 1019 aaKnown RBP19.58■□□□□ 0.72
TRAPPC1-207ENST00000575639 C4BP0C0L5 1744 aa19.57■□□□□ 0.72
TRAPPC1-207ENST00000575639 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
TRAPPC1-207ENST00000575639 RFC4P35249 363 aa19.57■□□□□ 0.72
TRAPPC1-207ENST00000575639 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
TRAPPC1-207ENST00000575639 AMIGO3Q86WK7 504 aa19.57■□□□□ 0.72
TRAPPC1-207ENST00000575639 C5P01031 1676 aa19.56■□□□□ 0.72
TRAPPC1-207ENST00000575639 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
TRAPPC1-207ENST00000575639 ARHGEF1Q92888 912 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms