RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
USP43-206ENST00000575346 CABP4P57796 275 aa16.14■□□□□ 0.17
USP43-206ENST00000575346 ARXQ96QS3 562 aa16.14■□□□□ 0.17
USP43-206ENST00000575346 SYT17Q9BSW7 474 aa16.14■□□□□ 0.17
USP43-206ENST00000575346 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
USP43-206ENST00000575346 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
USP43-206ENST00000575346 ITPK1Q13572 414 aa16.13■□□□□ 0.17
USP43-206ENST00000575346 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
USP43-206ENST00000575346 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
USP43-206ENST00000575346 MRC1P22897 1456 aa16.12■□□□□ 0.17
USP43-206ENST00000575346 POLD1P28340 1107 aa16.12■□□□□ 0.17
USP43-206ENST00000575346 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
USP43-206ENST00000575346 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
USP43-206ENST00000575346 AK7Q96M32 723 aa16.12■□□□□ 0.17
USP43-206ENST00000575346 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
USP43-206ENST00000575346 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
USP43-206ENST00000575346 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
USP43-206ENST00000575346 SSFA2P28290 1259 aa16.11■□□□□ 0.17
USP43-206ENST00000575346 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
USP43-206ENST00000575346 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
USP43-206ENST00000575346 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
USP43-206ENST00000575346 U2SURPO15042 1029 aaKnown RBP16.1■□□□□ 0.17
USP43-206ENST00000575346 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
USP43-206ENST00000575346 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
USP43-206ENST00000575346 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
USP43-206ENST00000575346 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
USP43-206ENST00000575346 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
USP43-206ENST00000575346 UTRNP46939 3433 aa16.09■□□□□ 0.17
USP43-206ENST00000575346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
USP43-206ENST00000575346 MSH5O43196 834 aa16.08■□□□□ 0.16
USP43-206ENST00000575346 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
USP43-206ENST00000575346 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
USP43-206ENST00000575346 ZNF784Q8NCA9 323 aaPredicted RBP16.07■□□□□ 0.16
USP43-206ENST00000575346 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
USP43-206ENST00000575346 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
USP43-206ENST00000575346 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
USP43-206ENST00000575346 GNPATO15228 680 aa16.06■□□□□ 0.16
USP43-206ENST00000575346 TJP1Q07157 1748 aa16.05■□□□□ 0.16
USP43-206ENST00000575346 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
USP43-206ENST00000575346 FCHSD2O94868 740 aa16.04■□□□□ 0.16
USP43-206ENST00000575346 PHF14O94880 888 aa16.04■□□□□ 0.16
USP43-206ENST00000575346 ADRA2BP18089 450 aa16.04■□□□□ 0.16
USP43-206ENST00000575346 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
USP43-206ENST00000575346 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
USP43-206ENST00000575346 RPS6KA4O75676 772 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 SMIM5Q71RC9 77 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
USP43-206ENST00000575346 CEMIPQ8WUJ3 1361 aa16.02■□□□□ 0.16
USP43-206ENST00000575346 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
USP43-206ENST00000575346 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP43-206ENST00000575346 TRAPPC3LQ5T215 181 aa16.02■□□□□ 0.16
USP43-206ENST00000575346 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
USP43-206ENST00000575346 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
USP43-206ENST00000575346 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
USP43-206ENST00000575346 VSIG10Q8N0Z9 540 aa16.01■□□□□ 0.15
USP43-206ENST00000575346 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
USP43-206ENST00000575346 SLC39A6Q13433 755 aa16■□□□□ 0.15
USP43-206ENST00000575346 RALBP1Q15311 655 aa16■□□□□ 0.15
USP43-206ENST00000575346 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
USP43-206ENST00000575346 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
USP43-206ENST00000575346 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
USP43-206ENST00000575346 TEFQ10587 303 aa15.98■□□□□ 0.15
USP43-206ENST00000575346 GPR162Q16538 588 aa15.98■□□□□ 0.15
USP43-206ENST00000575346 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
USP43-206ENST00000575346 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
USP43-206ENST00000575346 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
USP43-206ENST00000575346 NLGN2Q8NFZ4 835 aa15.98■□□□□ 0.15
USP43-206ENST00000575346 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
USP43-206ENST00000575346 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
USP43-206ENST00000575346 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
USP43-206ENST00000575346 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
USP43-206ENST00000575346 GYS1P13807 737 aa15.96■□□□□ 0.15
USP43-206ENST00000575346 RFC4P35249 363 aa15.96■□□□□ 0.15
USP43-206ENST00000575346 ZNF790Q6PG37 636 aa15.96■□□□□ 0.15
USP43-206ENST00000575346 CCDC87Q9NVE4 849 aa15.96■□□□□ 0.15
USP43-206ENST00000575346 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
USP43-206ENST00000575346 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
USP43-206ENST00000575346 MMP10P09238 476 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 ZNF496Q96IT1 587 aaPredicted RBP15.94■□□□□ 0.14
USP43-206ENST00000575346 PLEKHF1Q96S99 279 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 CHD4Q14839 1912 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
USP43-206ENST00000575346 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
USP43-206ENST00000575346 ZEB1P37275 1124 aaPredicted RBP15.93■□□□□ 0.14
USP43-206ENST00000575346 RTF1Q92541 710 aaKnown RBP15.93■□□□□ 0.14
USP43-206ENST00000575346 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
USP43-206ENST00000575346 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
USP43-206ENST00000575346 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
USP43-206ENST00000575346 MYBBP1AQ9BQG0 1328 aaKnown RBP15.92■□□□□ 0.14
USP43-206ENST00000575346 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
USP43-206ENST00000575346 STARD3NLO95772 234 aa15.91■□□□□ 0.14
USP43-206ENST00000575346 NEFMP07197 916 aa15.91■□□□□ 0.14
USP43-206ENST00000575346 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
USP43-206ENST00000575346 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms