RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 STK26Q9P289 416 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 PLEKHG2Q9H7P9 1386 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 ABCA8O94911 1581 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 H0YHG0 523 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 MPHOSPH10O00566 681 aaKnown RBP9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 ERCC3P19447 782 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 SARNPP82979 210 aaKnown RBP9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 MTA1Q13330 715 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 SETDB1Q15047 1291 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 SRLQ86TD4 932 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 C10orf67Q8IYJ2 551 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 PPM1EQ8WY54 764 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-220ENST00000575333 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
TOM1L1-220ENST00000575333 IRX1P78414 480 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-220ENST00000575333 SYT10Q6XYQ8 523 aa9.53□□□□□ -0.88
TOM1L1-220ENST00000575333 GOLGA5Q8TBA6 731 aa9.53□□□□□ -0.88
TOM1L1-220ENST00000575333 DRC1Q96MC2 740 aa9.53□□□□□ -0.88
TOM1L1-220ENST00000575333 SCAF11Q99590 1463 aaKnown RBP9.52□□□□□ -0.88
TOM1L1-220ENST00000575333 IPO7O95373 1038 aaKnown RBP9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 IVLP07476 585 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 KIAA1524Q8TCG1 905 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 ZNF446Q9NWS9 450 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 EPRSP07814 1512 aaKnown RBP9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 CPP00450 1065 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 USP8P40818 1118 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 TSPY26PQ9H489 355 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
TOM1L1-220ENST00000575333 GCC2Q8IWJ2 1684 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 BIRC2Q13490 618 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 MMS22LQ6ZRQ5 1243 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 ANKRD23Q86SG2 305 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 CCDC191Q8NCU4 936 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 MKL1Q969V6 931 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 TMX1Q9H3N1 280 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.893e-13■■■■■ 279.4
TOM1L1-220ENST00000575333 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 PSD3Q9NYI0 1048 aa9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 RRP15Q9Y3B9 282 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 ZCCHC11Q5TAX3 1644 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-220ENST00000575333 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 NAIPQ13075 1403 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 ZSCAN26Q16670 478 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 MAP9Q49MG5 647 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 CCDC112Q8NEF3 446 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 FBXO18Q8NFZ0 1043 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 AK7Q96M32 723 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 TEX14Q8IWB6 1497 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
TOM1L1-220ENST00000575333 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 JAKMIP3Q5VZ66 844 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 MPNDQ8N594 471 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 ERCC4Q92889 916 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 USP25Q9UHP3 1055 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 PLEKHD1A6NEE1 506 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 ATP8B1O43520 1251 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 C21orf2O43822 256 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 PPP2R5AQ15172 486 aa9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 NUP153P49790 1475 aaKnown RBP9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 RPRD2Q5VT52 1461 aaKnown RBP9.49□□□□□ -0.89
TOM1L1-220ENST00000575333 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 KIF2AO00139 706 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 DPYSL4O14531 572 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 SEMA3EO15041 775 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 ZRSR1Q15695 479 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 ZC3H12AQ5D1E8 599 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 DNAJC21Q5F1R6 531 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 TEX13AQ9BXU3 409 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 PCF11O94913 1555 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 KIF14Q15058 1648 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 ATAD2Q6PL18 1390 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 ATP10BO94823 1461 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
TOM1L1-220ENST00000575333 SGSM2O43147 1006 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 TPM1P09493 284 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 SSFA2P28290 1259 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 GYS2P54840 703 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 FMNL3Q8IVF7 1028 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms