RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	RBM27	Q9P2N5	1060 aa	Known RBP	13.53	□□□□□ -0.24
NXN-208	ENST00000575171	PPIP5K1	Q6PFW1	1433 aa		13.53	□□□□□ -0.24
NXN-208	ENST00000575171	PSME1	Q06323	249 aa		13.52	□□□□□ -0.25
NXN-208	ENST00000575171	PROX2	Q3B8N5	592 aa		13.52	□□□□□ -0.25
NXN-208	ENST00000575171	TMC1	Q8TDI8	760 aa		13.52	□□□□□ -0.25
NXN-208	ENST00000575171	CABP1	Q9NZU7	370 aa		13.52	□□□□□ -0.25
NXN-208	ENST00000575171	ADGRD1	Q6QNK2	874 aa		13.51	□□□□□ -0.25
NXN-208	ENST00000575171	KRT28	Q7Z3Y7	464 aa		13.51	□□□□□ -0.25
NXN-208	ENST00000575171	VPS9D1	Q9Y2B5	631 aa		13.51	□□□□□ -0.25
NXN-208	ENST00000575171	ACE	P12821	1306 aa		13.5	□□□□□ -0.25
NXN-208	ENST00000575171	TRIM6-TRIM34	B2RNG4	842 aa		13.5	□□□□□ -0.25
NXN-208	ENST00000575171	GNPAT	O15228	680 aa		13.5	□□□□□ -0.25
NXN-208	ENST00000575171	ONECUT3	O60422	494 aa	Predicted RBP	13.5	□□□□□ -0.25
NXN-208	ENST00000575171	CDCA8	Q53HL2	280 aa		13.5	□□□□□ -0.25
NXN-208	ENST00000575171	TNS1	Q9HBL0	1735 aa	Known RBP	13.5	□□□□□ -0.25
NXN-208	ENST00000575171	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.5	□□□□□ -0.25
NXN-208	ENST00000575171	CRYBG1	Q9Y4K1	1723 aa		13.5	□□□□□ -0.25
NXN-208	ENST00000575171	SPATA31A3	Q5VYP0	1347 aa		13.49	□□□□□ -0.25
NXN-208	ENST00000575171	PLEKHG3	A1L390	1219 aa		13.49	□□□□□ -0.25
NXN-208	ENST00000575171	UNC5CL	Q8IV45	518 aa		13.49	□□□□□ -0.25
NXN-208	ENST00000575171	RGPD1	P0DJD0	1748 aa		13.48	□□□□□ -0.25
NXN-208	ENST00000575171	PADI6	Q6TGC4	694 aa		13.48	□□□□□ -0.25
NXN-208	ENST00000575171	DEFB132	Q7Z7B7	95 aa		13.48	□□□□□ -0.25
NXN-208	ENST00000575171	ZC3H15	Q8WU90	426 aa	Known RBP	13.48	□□□□□ -0.25
NXN-208	ENST00000575171	PUS7	Q96PZ0	661 aa	Known RBP	13.47	□□□□□ -0.25
NXN-208	ENST00000575171	RABGEF1	Q9UJ41	708 aa		13.47	□□□□□ -0.25
NXN-208	ENST00000575171	TSKS	Q9UJT2	592 aa		13.47	□□□□□ -0.25
NXN-208	ENST00000575171	TNS3	Q68CZ2	1445 aa		13.47	□□□□□ -0.25
NXN-208	ENST00000575171	ALS2	Q96Q42	1657 aa		13.47	□□□□□ -0.25
NXN-208	ENST00000575171	POLR3A	O14802	1390 aa	Predicted RBP	13.46	□□□□□ -0.25
NXN-208	ENST00000575171	PACS2	Q86VP3	889 aa		13.46	□□□□□ -0.25
NXN-208	ENST00000575171	SLC12A5	Q9H2X9	1139 aa		13.46	□□□□□ -0.25
NXN-208	ENST00000575171	TOPAZ1	Q8N9V7	1692 aa		13.46	□□□□□ -0.26
NXN-208	ENST00000575171	THSD7A	Q9UPZ6	1657 aa		13.45	□□□□□ -0.26
NXN-208	ENST00000575171	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.45	□□□□□ -0.26
NXN-208	ENST00000575171	TTC13	Q8NBP0	860 aa		13.45	□□□□□ -0.26
NXN-208	ENST00000575171	SBNO1	A3KN83	1393 aa		13.45	□□□□□ -0.26
NXN-208	ENST00000575171	ITSN1	Q15811	1721 aa		13.44	□□□□□ -0.26
NXN-208	ENST00000575171	VPS72	Q15906	364 aa		13.44	□□□□□ -0.26
NXN-208	ENST00000575171	KIAA1468	Q9P260	1216 aa		13.44	□□□□□ -0.26
NXN-208	ENST00000575171	SEPT12	Q8IYM1	358 aa		13.43	□□□□□ -0.26
NXN-208	ENST00000575171	NBPF3	Q9H094	633 aa		13.43	□□□□□ -0.26
NXN-208	ENST00000575171	TERF2IP	Q9NYB0	399 aa		13.43	□□□□□ -0.26
NXN-208	ENST00000575171	KTN1	Q86UP2	1357 aa	Known RBP	13.43	□□□□□ -0.26
NXN-208	ENST00000575171	NINL	Q9Y2I6	1382 aa		13.43	□□□□□ -0.26
NXN-208	ENST00000575171	COL14A1	Q05707	1796 aa	Known RBP	13.43	□□□□□ -0.26
NXN-208	ENST00000575171	USP6	P35125	1406 aa		13.42	□□□□□ -0.26
NXN-208	ENST00000575171	C11orf95	C9JLR9	678 aa	Predicted RBP	13.42	□□□□□ -0.26
NXN-208	ENST00000575171	HR	O43593	1189 aa		13.42	□□□□□ -0.26
NXN-208	ENST00000575171	ZMYND10	O75800	440 aa		13.42	□□□□□ -0.26
NXN-208	ENST00000575171	FECH	P22830	423 aa		13.42	□□□□□ -0.26
NXN-208	ENST00000575171	FAM198A	Q9UFP1	575 aa		13.42	□□□□□ -0.26
NXN-208	ENST00000575171	NBPF26	B4DH59	902 aa		13.41	□□□□□ -0.26
NXN-208	ENST00000575171	NUTM2G	Q5VZR2	741 aa		13.41	□□□□□ -0.26
NXN-208	ENST00000575171		A0A1W2PP64	1363 aa		13.41	□□□□□ -0.26
NXN-208	ENST00000575171	ARHGEF10	O15013	1369 aa		13.41	□□□□□ -0.26
NXN-208	ENST00000575171	KIF7	Q2M1P5	1343 aa		13.4	□□□□□ -0.26
NXN-208	ENST00000575171	DISP2	A7MBM2	1401 aa		13.4	□□□□□ -0.26
NXN-208	ENST00000575171	CPSF1	Q10570	1443 aa	Known RBP	13.4	□□□□□ -0.26
NXN-208	ENST00000575171	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.4	□□□□□ -0.26
NXN-208	ENST00000575171	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
NXN-208	ENST00000575171	ABTB2	Q8N961	1025 aa		13.4	□□□□□ -0.26
NXN-208	ENST00000575171	ANKRD36B	Q8N2N9	1353 aa		13.4	□□□□□ -0.26
NXN-208	ENST00000575171	RREB1	Q92766	1687 aa		13.4	□□□□□ -0.26
NXN-208	ENST00000575171	CABLES1	Q8TDN4	633 aa		13.39	□□□□□ -0.27
NXN-208	ENST00000575171	CD163L1	Q9NR16	1453 aa		13.39	□□□□□ -0.27
NXN-208	ENST00000575171	TTC21B	Q7Z4L5	1316 aa		13.39	□□□□□ -0.27
NXN-208	ENST00000575171	BRD4	O60885	1362 aa	Predicted RBP	13.38	□□□□□ -0.27
NXN-208	ENST00000575171	MAP2K5	Q13163	448 aa		13.38	□□□□□ -0.27
NXN-208	ENST00000575171	BARGIN	Q6ZT62	677 aa		13.38	□□□□□ -0.27
NXN-208	ENST00000575171	KRT27	Q7Z3Y8	459 aa		13.38	□□□□□ -0.27
NXN-208	ENST00000575171	TATDN2	Q93075	761 aa		13.38	□□□□□ -0.27
NXN-208	ENST00000575171	PNMA3	Q9UL41	463 aa		13.38	□□□□□ -0.27
NXN-208	ENST00000575171	CCDC7	Q96M83	1385 aa		13.37	□□□□□ -0.27
NXN-208	ENST00000575171	MRPL50	Q8N5N7	158 aa	Known RBP	13.37	□□□□□ -0.27
NXN-208	ENST00000575171	NUP188	Q5SRE5	1749 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	NUDT18	Q6ZVK8	323 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	ADGRG1	Q9Y653	693 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	EDC4	Q6P2E9	1401 aa	Known RBP	13.36	□□□□□ -0.27
NXN-208	ENST00000575171	SSH2	Q76I76	1423 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	WASHC2A	Q641Q2	1341 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	TTC21A	Q8NDW8	1320 aa		13.36	□□□□□ -0.27
NXN-208	ENST00000575171	LAPTM4B	Q86VI4	370 aa		13.35	□□□□□ -0.27
NXN-208	ENST00000575171	NLRP13	Q86W25	1043 aa		13.35	□□□□□ -0.27
NXN-208	ENST00000575171	NME9	Q86XW9	330 aa		13.35	□□□□□ -0.27
NXN-208	ENST00000575171	KRI1	Q8N9T8	703 aa	Known RBP	13.35	□□□□□ -0.27
NXN-208	ENST00000575171	PANK3	Q9H999	370 aa		13.35	□□□□□ -0.27
NXN-208	ENST00000575171	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.35	□□□□□ -0.27
NXN-208	ENST00000575171	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.35	□□□□□ -0.27
NXN-208	ENST00000575171	NSD3	Q9BZ95	1437 aa		13.34	□□□□□ -0.27
NXN-208	ENST00000575171	FAM83G	A6ND36	823 aa		13.34	□□□□□ -0.27
NXN-208	ENST00000575171	SF3B2	Q13435	895 aa	Known RBP	13.34	□□□□□ -0.27
NXN-208	ENST00000575171	C3orf80	F5H4A9	247 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	SMAP	O00193	183 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	OAT	P04181	439 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	BAG6	P46379	1132 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	FAM161A	Q3B820	660 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	RBM46	Q8TBY0	533 aa	Known RBP	13.33	□□□□□ -0.28
NXN-208	ENST00000575171	CARD14	Q9BXL6	1004 aa		13.33	□□□□□ -0.28
NXN-208	ENST00000575171	MYOM1	P52179	1685 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms