RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 BTBD11A6QL63 1104 aa15.42■□□□□ 0.06
PRPF8-212ENST00000575116 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
PRPF8-212ENST00000575116 MARCH10Q8NA82 808 aaPredicted RBP15.42■□□□□ 0.06
PRPF8-212ENST00000575116 A0A0G2JS52 829 aa15.41■□□□□ 0.06
PRPF8-212ENST00000575116 RXRBP28702 533 aa15.41■□□□□ 0.06
PRPF8-212ENST00000575116 MYT1Q01538 1121 aa15.41■□□□□ 0.06
PRPF8-212ENST00000575116 NFATC2IPQ8NCF5 419 aa15.41■□□□□ 0.06
PRPF8-212ENST00000575116 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
PRPF8-212ENST00000575116 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
PRPF8-212ENST00000575116 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
PRPF8-212ENST00000575116 BCL9O00512 1426 aa15.4■□□□□ 0.06
PRPF8-212ENST00000575116 SOS1Q07889 1333 aaPredicted RBP15.4■□□□□ 0.06
PRPF8-212ENST00000575116 MIS18AQ9NYP9 233 aa15.39■□□□□ 0.05
PRPF8-212ENST00000575116 TMOD3Q9NYL9 352 aa15.38■□□□□ 0.05
PRPF8-212ENST00000575116 RCAN3Q9UKA8 241 aa15.38■□□□□ 0.05
PRPF8-212ENST00000575116 KDM3BQ7LBC6 1761 aa15.38■□□□□ 0.05
PRPF8-212ENST00000575116 EIF4A1P60842 406 aaKnown RBP15.37■□□□□ 0.05
PRPF8-212ENST00000575116 ZNF790Q6PG37 636 aa15.37■□□□□ 0.05
PRPF8-212ENST00000575116 CHMP4AQ9BY43 222 aa15.37■□□□□ 0.05
PRPF8-212ENST00000575116 TOGARAM1Q9Y4F4 1720 aa15.37■□□□□ 0.05
PRPF8-212ENST00000575116 VAMP4O75379 141 aa15.36■□□□□ 0.05
PRPF8-212ENST00000575116 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
PRPF8-212ENST00000575116 ITGB4P16144 1822 aa15.36■□□□□ 0.05
PRPF8-212ENST00000575116 HOXB7P09629 217 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
PRPF8-212ENST00000575116 POTEAQ6S8J7 498 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 PIGBQ92521 554 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 HEG1Q9ULI3 1381 aa15.35■□□□□ 0.05
PRPF8-212ENST00000575116 ALDH1L2Q3SY69 923 aa15.34■□□□□ 0.05
PRPF8-212ENST00000575116 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
PRPF8-212ENST00000575116 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
PRPF8-212ENST00000575116 KCNQ3O43525 872 aa15.33■□□□□ 0.04
PRPF8-212ENST00000575116 RARSP54136 660 aaKnown RBP15.33■□□□□ 0.04
PRPF8-212ENST00000575116 SLC39A6Q13433 755 aa15.33■□□□□ 0.04
PRPF8-212ENST00000575116 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
PRPF8-212ENST00000575116 ELL2O00472 640 aaPredicted RBP15.32■□□□□ 0.04
PRPF8-212ENST00000575116 FAM196AQ6ZSG2 479 aa15.32■□□□□ 0.04
PRPF8-212ENST00000575116 FMNL2Q96PY5 1086 aa15.32■□□□□ 0.04
PRPF8-212ENST00000575116 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
PRPF8-212ENST00000575116 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
PRPF8-212ENST00000575116 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
PRPF8-212ENST00000575116 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
PRPF8-212ENST00000575116 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
PRPF8-212ENST00000575116 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
PRPF8-212ENST00000575116 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
PRPF8-212ENST00000575116 RNF123Q5XPI4 1314 aa15.31■□□□□ 0.04
PRPF8-212ENST00000575116 SNRPA1P09661 255 aaKnown RBP15.3■□□□□ 0.04
PRPF8-212ENST00000575116 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
PRPF8-212ENST00000575116 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-212ENST00000575116 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-212ENST00000575116 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
PRPF8-212ENST00000575116 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
PRPF8-212ENST00000575116 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
PRPF8-212ENST00000575116 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
PRPF8-212ENST00000575116 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
PRPF8-212ENST00000575116 RGS12O14924 1447 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 KAT6BQ8WYB5 2073 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 KCNQ2O43526 872 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-212ENST00000575116 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
PRPF8-212ENST00000575116 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.04
PRPF8-212ENST00000575116 BCAR3O75815 825 aa15.27■□□□□ 0.04
PRPF8-212ENST00000575116 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
PRPF8-212ENST00000575116 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-212ENST00000575116 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
PRPF8-212ENST00000575116 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
PRPF8-212ENST00000575116 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
PRPF8-212ENST00000575116 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
PRPF8-212ENST00000575116 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
PRPF8-212ENST00000575116 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
PRPF8-212ENST00000575116 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
PRPF8-212ENST00000575116 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
PRPF8-212ENST00000575116 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
PRPF8-212ENST00000575116 EIF2S2P20042 333 aaKnown RBP15.24■□□□□ 0.03
PRPF8-212ENST00000575116 ARHGAP45Q92619 1136 aa15.24■□□□□ 0.03
PRPF8-212ENST00000575116 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
PRPF8-212ENST00000575116 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
PRPF8-212ENST00000575116 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
PRPF8-212ENST00000575116 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
PRPF8-212ENST00000575116 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
PRPF8-212ENST00000575116 PALLDQ8WX93 1383 aa15.23■□□□□ 0.03
PRPF8-212ENST00000575116 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
PRPF8-212ENST00000575116 BTAF1O14981 1849 aa15.22■□□□□ 0.03
PRPF8-212ENST00000575116 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
PRPF8-212ENST00000575116 MS4A1P11836 297 aa15.22■□□□□ 0.03
PRPF8-212ENST00000575116 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
PRPF8-212ENST00000575116 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
PRPF8-212ENST00000575116 CICQ96RK0 1608 aaPredicted RBP15.21■□□□□ 0.03
PRPF8-212ENST00000575116 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
PRPF8-212ENST00000575116 STARD3NLO95772 234 aa15.21■□□□□ 0.03
PRPF8-212ENST00000575116 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
PRPF8-212ENST00000575116 SIK1P57059 783 aa15.21■□□□□ 0.03
PRPF8-212ENST00000575116 ZKSCAN2Q63HK3 967 aa15.21■□□□□ 0.03
PRPF8-212ENST00000575116 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRPF8-212ENST00000575116 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms