RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-206	ENST00000574781		A0A1W2PP64	1363 aa		11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	NINL	Q9Y2I6	1382 aa		11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	AMPH	P49418	695 aa		11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	COG3	Q96JB2	828 aa		11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	MTFR1L	Q9H019	292 aa		11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.21	□□□□□ -0.61
ERCC4-206	ENST00000574781	TNS2	Q63HR2	1409 aa		11.2	□□□□□ -0.62
ERCC4-206	ENST00000574781	PRIM1	P49642	420 aa	Known RBP	11.2	□□□□□ -0.62
ERCC4-206	ENST00000574781	ZNF827	Q17R98	1081 aa		11.2	□□□□□ -0.62
ERCC4-206	ENST00000574781	RNF166	Q96A37	237 aa	Predicted RBP	11.2	□□□□□ -0.62
ERCC4-206	ENST00000574781	EDC4	Q6P2E9	1401 aa	Known RBP	11.19	□□□□□ -0.62
ERCC4-206	ENST00000574781	ARX	Q96QS3	562 aa		11.19	□□□□□ -0.62
ERCC4-206	ENST00000574781	TESK2	Q96S53	571 aa		11.19	□□□□□ -0.62
ERCC4-206	ENST00000574781	OCEL1	Q9H607	264 aa		11.19	□□□□□ -0.62
ERCC4-206	ENST00000574781	MAP3K19	Q56UN5	1328 aa		11.18	□□□□□ -0.62
ERCC4-206	ENST00000574781	HOXC9	P31274	260 aa		11.18	□□□□□ -0.62
ERCC4-206	ENST00000574781	RRS1	Q15050	365 aa	Known RBP	11.18	□□□□□ -0.62
ERCC4-206	ENST00000574781	KAT6B	Q8WYB5	2073 aa		11.18	□□□□□ -0.62
ERCC4-206	ENST00000574781	GOLGA2	Q08379	1002 aa		11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	MKRN3	Q13064	507 aa	Known RBP	11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	USHBP1	Q8N6Y0	703 aa		11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	ZCRB1	Q8TBF4	217 aa	Known RBP	11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	PUS7	Q96PZ0	661 aa	Known RBP	11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	GGNBP2	Q9H3C7	697 aa		11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	TFCP2L1	Q9NZI6	479 aa		11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	GOLGB1	Q14789	3259 aa	Known RBP	11.17	□□□□□ -0.62
ERCC4-206	ENST00000574781	MON2	Q7Z3U7	1717 aa		11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	NBPF6	Q5VWK0	638 aa		11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	ZFP91	Q96JP5	570 aa	Predicted RBP	11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	NBPF4	Q96M43	638 aa		11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	WNK3	Q9BYP7	1800 aa		11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	CASZ1	Q86V15	1759 aa		11.16	□□□□□ -0.62
ERCC4-206	ENST00000574781	POTEB3	A0JP26	581 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	FYB1	O15117	783 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	RGL2	O15211	777 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	GPR162	Q16538	588 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	POTEB	Q6S5H4	581 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	RGPD4	Q7Z3J3	1758 aa		11.15	□□□□□ -0.62
ERCC4-206	ENST00000574781	LTN1	O94822	1766 aa		11.14	□□□□□ -0.63
ERCC4-206	ENST00000574781	SLC27A3	Q5K4L6	730 aa		11.14	□□□□□ -0.63
ERCC4-206	ENST00000574781	MYOM1	P52179	1685 aa		11.14	□□□□□ -0.63
ERCC4-206	ENST00000574781	TMF1	P82094	1093 aa		11.13	□□□□□ -0.63
ERCC4-206	ENST00000574781	HSP90AB2P	Q58FF8	381 aa		11.13	□□□□□ -0.63
ERCC4-206	ENST00000574781	ABCC6	O95255	1503 aa		11.13	□□□□□ -0.63
ERCC4-206	ENST00000574781	PNPLA7	Q6ZV29	1317 aa		11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	NHS	Q6T4R5	1651 aa		11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	SLC24A1	O60721	1099 aa		11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	POLD1	P28340	1107 aa		11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	RAPGEF4	Q8WZA2	1011 aa		11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	CCNL1	Q9UK58	526 aa	Predicted RBP	11.12	□□□□□ -0.63
ERCC4-206	ENST00000574781	PPM1G	O15355	546 aa	Predicted RBP	11.11	□□□□□ -0.63
ERCC4-206	ENST00000574781	PDCD7	Q8N8D1	485 aa	Known RBP	11.11	□□□□□ -0.63
ERCC4-206	ENST00000574781	SLC16A10	Q8TF71	515 aa		11.11	□□□□□ -0.63
ERCC4-206	ENST00000574781	ANKRD36B	Q8N2N9	1353 aa		11.11	□□□□□ -0.63
ERCC4-206	ENST00000574781	BTAF1	O14981	1849 aa		11.11	□□□□□ -0.63
ERCC4-206	ENST00000574781	TAT	P17735	454 aa	Predicted RBP	11.1	□□□□□ -0.63
ERCC4-206	ENST00000574781	MSL1	Q68DK7	614 aa		11.1	□□□□□ -0.63
ERCC4-206	ENST00000574781	MPRIP	Q6WCQ1	1025 aa		11.1	□□□□□ -0.63
ERCC4-206	ENST00000574781	COL23A1	Q86Y22	540 aa	Predicted RBP	11.1	□□□□□ -0.63
ERCC4-206	ENST00000574781	NLGN2	Q8NFZ4	835 aa		11.1	□□□□□ -0.63
ERCC4-206	ENST00000574781	POLR3GL	Q9BT43	218 aa		11.09	□□□□□ -0.63
ERCC4-206	ENST00000574781	CARD14	Q9BXL6	1004 aa		11.09	□□□□□ -0.63
ERCC4-206	ENST00000574781	MEGF6	O75095	1541 aa		11.09	□□□□□ -0.63
ERCC4-206	ENST00000574781	USP54	Q70EL1	1684 aa		11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	NSD2	O96028	1365 aa		11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	USP47	Q96K76	1375 aa		11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	SMIM5	Q71RC9	77 aa		11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	EMILIN1	Q9Y6C2	1016 aa		11.08	□□□□□ -0.64
ERCC4-206	ENST00000574781	TRIM26	Q12899	539 aa	Predicted RBP	11.07	□□□□□ -0.64
ERCC4-206	ENST00000574781	EFCAB3	Q8N7B9	438 aa		11.07	□□□□□ -0.64
ERCC4-206	ENST00000574781	PAPPA	Q13219	1627 aa		11.06	□□□□□ -0.64
ERCC4-206	ENST00000574781	RGPD2	P0DJD1	1756 aa		11.06	□□□□□ -0.64
ERCC4-206	ENST00000574781	CYP27B1	O15528	508 aa		11.06	□□□□□ -0.64
ERCC4-206	ENST00000574781	CDCA8	Q53HL2	280 aa		11.06	□□□□□ -0.64
ERCC4-206	ENST00000574781	CGNL1	Q0VF96	1302 aa		11.06	□□□□□ -0.64
ERCC4-206	ENST00000574781	TNNT2	P45379	298 aa	Predicted RBP	11.05	□□□□□ -0.64
ERCC4-206	ENST00000574781	SMG6	Q86US8	1419 aa	Known RBP	11.05	□□□□□ -0.64
ERCC4-206	ENST00000574781	RTL1	A6NKG5	1358 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	INSR	P06213	1382 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	MAP3K5	Q99683	1374 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	SENP3-EIF4A1	A0A087X0R7	540 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	PHF14	O94880	888 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	YBX3	P16989	372 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	C1QTNF8	P60827	252 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	PIGB	Q92521	554 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	PCGF6	Q9BYE7	350 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	WWC3	Q9ULE0	1092 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	PCDH11X	Q9BZA7	1347 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	PCDH11Y	Q9BZA8	1340 aa		11.04	□□□□□ -0.64
ERCC4-206	ENST00000574781	STK25	O00506	426 aa		11.03	□□□□□ -0.64
ERCC4-206	ENST00000574781	AMIGO3	Q86WK7	504 aa		11.03	□□□□□ -0.64
ERCC4-206	ENST00000574781	FAM208A	Q9UK61	1670 aa	Known RBP	11.03	□□□□□ -0.64
ERCC4-206	ENST00000574781	FLT4	P35916	1363 aa		11.03	□□□□□ -0.64
ERCC4-206	ENST00000574781	PALLD	Q8WX93	1383 aa		11.03	□□□□□ -0.64
ERCC4-206	ENST00000574781	DOT1L	Q8TEK3	1739 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms