RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 SEPT12Q8IYM1 358 aa27.5■■□□□ 1.99
CXCL16-203ENST00000574412 DOT1LQ8TEK3 1739 aa27.5■■□□□ 1.99
CXCL16-203ENST00000574412 CHL1O00533 1208 aa27.49■■□□□ 1.99
CXCL16-203ENST00000574412 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
CXCL16-203ENST00000574412 ITGB4P16144 1822 aa27.49■■□□□ 1.99
CXCL16-203ENST00000574412 SLC52A2Q9HAB3 445 aa27.49■■□□□ 1.99
CXCL16-203ENST00000574412 BRWD3Q6RI45 1802 aa27.48■■□□□ 1.99
CXCL16-203ENST00000574412 CABP4P57796 275 aa27.48■■□□□ 1.99
CXCL16-203ENST00000574412 EXOSC9Q06265 439 aaKnown RBP27.48■■□□□ 1.99
CXCL16-203ENST00000574412 MRC1P22897 1456 aa27.48■■□□□ 1.99
CXCL16-203ENST00000574412 KDM3BQ7LBC6 1761 aa27.48■■□□□ 1.99
CXCL16-203ENST00000574412 ONECUT3O60422 494 aaPredicted RBP27.47■■□□□ 1.99
CXCL16-203ENST00000574412 RBM6P78332 1123 aaKnown RBP27.47■■□□□ 1.99
CXCL16-203ENST00000574412 FAM182BQ5T319 152 aa27.46■■□□□ 1.99
CXCL16-203ENST00000574412 BTBD11A6QL63 1104 aa27.46■■□□□ 1.99
CXCL16-203ENST00000574412 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
CXCL16-203ENST00000574412 NEFLP07196 543 aa27.44■■□□□ 1.98
CXCL16-203ENST00000574412 KRT24Q2M2I5 525 aa27.44■■□□□ 1.98
CXCL16-203ENST00000574412 KCNQ3O43525 872 aa27.43■■□□□ 1.98
CXCL16-203ENST00000574412 ACSBG1Q96GR2 724 aa27.43■■□□□ 1.98
CXCL16-203ENST00000574412 ERVV-2B6SEH9 535 aa27.43■■□□□ 1.98
CXCL16-203ENST00000574412 ELL2O00472 640 aaPredicted RBP27.43■■□□□ 1.98
CXCL16-203ENST00000574412 RXRBP28702 533 aa27.43■■□□□ 1.98
CXCL16-203ENST00000574412 SLC39A6Q13433 755 aa27.43■■□□□ 1.98
CXCL16-203ENST00000574412 SYTL4Q96C24 671 aaPredicted RBP27.43■■□□□ 1.98
CXCL16-203ENST00000574412 RCAN3Q9UKA8 241 aa27.42■■□□□ 1.98
CXCL16-203ENST00000574412 TSPYL6Q8N831 410 aa27.4■■□□□ 1.98
CXCL16-203ENST00000574412 C8orf58Q8NAV2 365 aa27.4■■□□□ 1.98
CXCL16-203ENST00000574412 TMOD3Q9NYL9 352 aa27.4■■□□□ 1.98
CXCL16-203ENST00000574412 RNF123Q5XPI4 1314 aa27.4■■□□□ 1.98
CXCL16-203ENST00000574412 FKBP8Q14318 412 aa27.4■■□□□ 1.98
CXCL16-203ENST00000574412 PRIM1P49642 420 aaKnown RBP27.39■■□□□ 1.97
CXCL16-203ENST00000574412 BABAM1Q9NWV8 329 aa27.38■■□□□ 1.97
CXCL16-203ENST00000574412 PIGBQ92521 554 aa27.36■■□□□ 1.97
CXCL16-203ENST00000574412 ZNF790Q6PG37 636 aa27.36■■□□□ 1.97
CXCL16-203ENST00000574412 PAPPAQ13219 1627 aa27.35■■□□□ 1.97
CXCL16-203ENST00000574412 RGS12O14924 1447 aa27.35■■□□□ 1.97
CXCL16-203ENST00000574412 TWISTNBQ3B726 338 aaPredicted RBP27.35■■□□□ 1.97
CXCL16-203ENST00000574412 EIF4A1P60842 406 aaKnown RBP27.34■■□□□ 1.97
CXCL16-203ENST00000574412 KCNQ2O43526 872 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 KRT27Q7Z3Y8 459 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 BCL9O00512 1426 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 EP400Q96L91 3159 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 SBF2Q86WG5 1849 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 TTC5Q8N0Z6 440 aa27.33■■□□□ 1.97
CXCL16-203ENST00000574412 BCL2L13Q9BXK5 485 aa27.32■■□□□ 1.96
CXCL16-203ENST00000574412 IRX6P78412 446 aaPredicted RBP27.31■■□□□ 1.96
CXCL16-203ENST00000574412 ASAP1Q9ULH1 1129 aa27.31■■□□□ 1.96
CXCL16-203ENST00000574412 UBR2Q8IWV8 1755 aa27.31■■□□□ 1.96
CXCL16-203ENST00000574412 TCERG1O14776 1098 aaKnown RBP27.3■■□□□ 1.96
CXCL16-203ENST00000574412 VAMP4O75379 141 aa27.3■■□□□ 1.96
CXCL16-203ENST00000574412 PTF1AQ7RTS3 328 aa27.3■■□□□ 1.96
CXCL16-203ENST00000574412 ZNF496Q96IT1 587 aaPredicted RBP27.3■■□□□ 1.96
CXCL16-203ENST00000574412 C5P01031 1676 aa27.3■■□□□ 1.96
CXCL16-203ENST00000574412 NHSQ6T4R5 1651 aa27.29■■□□□ 1.96
CXCL16-203ENST00000574412 PTCD1O75127 700 aaKnown RBP27.28■■□□□ 1.96
CXCL16-203ENST00000574412 BCAR3O75815 825 aa27.28■■□□□ 1.96
CXCL16-203ENST00000574412 RARSP54136 660 aaKnown RBP27.28■■□□□ 1.96
CXCL16-203ENST00000574412 RRP1P56182 461 aaKnown RBP27.28■■□□□ 1.96
CXCL16-203ENST00000574412 ATG3Q9NT62 314 aa27.28■■□□□ 1.96
CXCL16-203ENST00000574412 PRAMEF22A3QJZ6 481 aa27.27■■□□□ 1.96
CXCL16-203ENST00000574412 NECTIN2Q92692 538 aa27.27■■□□□ 1.96
CXCL16-203ENST00000574412 KCPQ6ZWJ8 1503 aa27.27■■□□□ 1.96
CXCL16-203ENST00000574412 CT47B1P0C2W7 299 aaPredicted RBP27.27■■□□□ 1.96
CXCL16-203ENST00000574412 BTAF1O14981 1849 aa27.27■■□□□ 1.96
CXCL16-203ENST00000574412 SSH1Q8WYL5 1049 aa27.25■■□□□ 1.95
CXCL16-203ENST00000574412 FMNL2Q96PY5 1086 aa27.25■■□□□ 1.95
CXCL16-203ENST00000574412 GIGYF1O75420 1035 aaPredicted RBP27.24■■□□□ 1.95
CXCL16-203ENST00000574412 SMC4Q9NTJ3 1288 aa27.24■■□□□ 1.95
CXCL16-203ENST00000574412 HEG1Q9ULI3 1381 aa27.23■■□□□ 1.95
CXCL16-203ENST00000574412 EIF2S2P20042 333 aaKnown RBP27.23■■□□□ 1.95
CXCL16-203ENST00000574412 RBM42Q9BTD8 480 aaKnown RBP27.23■■□□□ 1.95
CXCL16-203ENST00000574412 FAM196AQ6ZSG2 479 aa27.21■■□□□ 1.95
CXCL16-203ENST00000574412 PLIN1O60240 522 aa27.21■■□□□ 1.95
CXCL16-203ENST00000574412 HDGFL1Q5TGJ6 251 aa27.2■■□□□ 1.94
CXCL16-203ENST00000574412 ERICH6BQ5W0A0 696 aa27.19■■□□□ 1.94
CXCL16-203ENST00000574412 LAMB4A4D0S4 1761 aa27.19■■□□□ 1.94
CXCL16-203ENST00000574412 SNRPA1P09661 255 aaKnown RBP27.18■■□□□ 1.94
CXCL16-203ENST00000574412 FRAT1Q92837 279 aaPredicted RBP27.17■■□□□ 1.94
CXCL16-203ENST00000574412 PALLDQ8WX93 1383 aa27.17■■□□□ 1.94
CXCL16-203ENST00000574412 TRIM37O94972 964 aa27.17■■□□□ 1.94
CXCL16-203ENST00000574412 HOXB7P09629 217 aa27.17■■□□□ 1.94
CXCL16-203ENST00000574412 ALDH1L2Q3SY69 923 aa27.17■■□□□ 1.94
CXCL16-203ENST00000574412 ZNF428Q96B54 188 aa27.17■■□□□ 1.94
CXCL16-203ENST00000574412 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
CXCL16-203ENST00000574412 CCDC30Q5VVM6 783 aa27.16■■□□□ 1.94
CXCL16-203ENST00000574412 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
CXCL16-203ENST00000574412 MRPL50Q8N5N7 158 aaKnown RBP27.15■■□□□ 1.94
CXCL16-203ENST00000574412 SLC4A9Q96Q91 983 aa27.15■■□□□ 1.94
CXCL16-203ENST00000574412 CANXP27824 592 aaKnown RBP27.14■■□□□ 1.93
CXCL16-203ENST00000574412 BCL11BQ9C0K0 894 aaPredicted RBP27.14■■□□□ 1.93
CXCL16-203ENST00000574412 CHPF2Q9P2E5 772 aa27.14■■□□□ 1.93
CXCL16-203ENST00000574412 TJP1Q07157 1748 aa27.14■■□□□ 1.93
CXCL16-203ENST00000574412 ANXA1P04083 346 aa27.13■■□□□ 1.93
CXCL16-203ENST00000574412 SLC4A2P04920 1241 aa27.13■■□□□ 1.93
CXCL16-203ENST00000574412 STK31Q9BXU1 1019 aa27.13■■□□□ 1.93
CXCL16-203ENST00000574412 DNAJC10Q8IXB1 793 aa27.12■■□□□ 1.93
CXCL16-203ENST00000574412 SMARCC1Q92922 1105 aaPredicted RBP27.12■■□□□ 1.93
CXCL16-203ENST00000574412 CACNA1FO60840 1977 aa27.12■■□□□ 1.93
CXCL16-203ENST00000574412 PIP4K2AP48426 406 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms