RNA–Protein interactions for RNA: ENST00000574132.5

RAB40B-209, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-209ENST00000574132 ITPK1Q13572 414 aa20.9■□□□□ 0.94
RAB40B-209ENST00000574132 RBM42Q9BTD8 480 aaKnown RBP20.9■□□□□ 0.94
RAB40B-209ENST00000574132 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
RAB40B-209ENST00000574132 PLEKHO1Q53GL0 409 aaPredicted RBP20.89■□□□□ 0.93
RAB40B-209ENST00000574132 UBR3Q6ZT12 1888 aa20.88■□□□□ 0.93
RAB40B-209ENST00000574132 IGSF1Q8N6C5 1336 aa20.88■□□□□ 0.93
RAB40B-209ENST00000574132 MORC1Q86VD1 984 aa20.88■□□□□ 0.93
RAB40B-209ENST00000574132 ERVV-2B6SEH9 535 aa20.86■□□□□ 0.93
RAB40B-209ENST00000574132 CABP4P57796 275 aa20.86■□□□□ 0.93
RAB40B-209ENST00000574132 TRAPPC3LQ5T215 181 aa20.86■□□□□ 0.93
RAB40B-209ENST00000574132 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-209ENST00000574132 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-209ENST00000574132 DCAF5Q96JK2 942 aa20.86■□□□□ 0.93
RAB40B-209ENST00000574132 RTCBQ9Y3I0 505 aaKnown RBP20.86■□□□□ 0.93
RAB40B-209ENST00000574132 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
RAB40B-209ENST00000574132 C1orf141Q5JVX7 400 aa20.85■□□□□ 0.93
RAB40B-209ENST00000574132 ATP10DQ9P241 1426 aa20.85■□□□□ 0.93
RAB40B-209ENST00000574132 MMP10P09238 476 aa20.84■□□□□ 0.93
RAB40B-209ENST00000574132 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
RAB40B-209ENST00000574132 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
RAB40B-209ENST00000574132 MTHFSP49914 203 aa20.83■□□□□ 0.93
RAB40B-209ENST00000574132 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
RAB40B-209ENST00000574132 PLEKHG2Q9H7P9 1386 aa20.83■□□□□ 0.92
RAB40B-209ENST00000574132 RFC4P35249 363 aa20.8■□□□□ 0.92
RAB40B-209ENST00000574132 SULT6B1Q6IMI4 303 aa20.8■□□□□ 0.92
RAB40B-209ENST00000574132 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
RAB40B-209ENST00000574132 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
RAB40B-209ENST00000574132 PTCD1O75127 700 aaKnown RBP20.79■□□□□ 0.92
RAB40B-209ENST00000574132 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
RAB40B-209ENST00000574132 SLC4A9Q96Q91 983 aa20.79■□□□□ 0.92
RAB40B-209ENST00000574132 KDRP35968 1356 aa20.79■□□□□ 0.92
RAB40B-209ENST00000574132 ADRA2BP18089 450 aa20.78■□□□□ 0.92
RAB40B-209ENST00000574132 RC3H1Q5TC82 1133 aaKnown RBP20.78■□□□□ 0.92
RAB40B-209ENST00000574132 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
RAB40B-209ENST00000574132 KDM6AO15550 1401 aaPredicted RBP20.77■□□□□ 0.91
RAB40B-209ENST00000574132 CNTNAP4Q9C0A0 1308 aa20.77■□□□□ 0.91
RAB40B-209ENST00000574132 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
RAB40B-209ENST00000574132 NFATC2IPQ8NCF5 419 aa20.76■□□□□ 0.91
RAB40B-209ENST00000574132 CCDC87Q9NVE4 849 aa20.76■□□□□ 0.91
RAB40B-209ENST00000574132 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
RAB40B-209ENST00000574132 TGFB2P61812 414 aa20.75■□□□□ 0.91
RAB40B-209ENST00000574132 A0A0G2JLW4 131 aa20.74■□□□□ 0.91
RAB40B-209ENST00000574132 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
RAB40B-209ENST00000574132 GYS1P13807 737 aa20.73■□□□□ 0.91
RAB40B-209ENST00000574132 ADCY9O60503 1353 aa20.72■□□□□ 0.91
RAB40B-209ENST00000574132 IL13P35225 146 aa20.72■□□□□ 0.91
RAB40B-209ENST00000574132 PXDNLA1KZ92 1463 aa20.71■□□□□ 0.91
RAB40B-209ENST00000574132 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
RAB40B-209ENST00000574132 FCHSD2O94868 740 aa20.7■□□□□ 0.9
RAB40B-209ENST00000574132 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
RAB40B-209ENST00000574132 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.9
RAB40B-209ENST00000574132 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
RAB40B-209ENST00000574132 DPEP1P16444 411 aa20.69■□□□□ 0.9
RAB40B-209ENST00000574132 COL5A3P25940 1745 aaPredicted RBP20.69■□□□□ 0.9
RAB40B-209ENST00000574132 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
RAB40B-209ENST00000574132 HMOX1P09601 288 aa20.68■□□□□ 0.9
RAB40B-209ENST00000574132 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
RAB40B-209ENST00000574132 SRP68Q9UHB9 627 aaKnown RBP20.68■□□□□ 0.9
RAB40B-209ENST00000574132 N4BP2Q86UW6 1770 aaPredicted RBP20.67■□□□□ 0.9
RAB40B-209ENST00000574132 MYH14Q7Z406 1995 aaKnown RBP20.66■□□□□ 0.9
RAB40B-209ENST00000574132 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
RAB40B-209ENST00000574132 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
RAB40B-209ENST00000574132 SLC52A2Q9HAB3 445 aa20.66■□□□□ 0.9
RAB40B-209ENST00000574132 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
RAB40B-209ENST00000574132 KIF13BQ9NQT8 1826 aa20.65■□□□□ 0.9
RAB40B-209ENST00000574132 KIF7Q2M1P5 1343 aa20.65■□□□□ 0.9
RAB40B-209ENST00000574132 ZPR1O75312 459 aa20.65■□□□□ 0.9
RAB40B-209ENST00000574132 HSPA6P17066 643 aa20.65■□□□□ 0.9
RAB40B-209ENST00000574132 FKBP8Q14318 412 aa20.65■□□□□ 0.9
RAB40B-209ENST00000574132 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
RAB40B-209ENST00000574132 DNAJC10Q8IXB1 793 aa20.64■□□□□ 0.89
RAB40B-209ENST00000574132 LGR6Q9HBX8 967 aa20.64■□□□□ 0.89
RAB40B-209ENST00000574132 PIM2Q9P1W9 311 aa20.64■□□□□ 0.89
RAB40B-209ENST00000574132 DIAPH1O60610 1272 aaKnown RBP20.63■□□□□ 0.89
RAB40B-209ENST00000574132 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
RAB40B-209ENST00000574132 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
RAB40B-209ENST00000574132 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
RAB40B-209ENST00000574132 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
RAB40B-209ENST00000574132 KIF3CO14782 793 aa20.61■□□□□ 0.89
RAB40B-209ENST00000574132 DALRD3Q5D0E6 543 aaKnown RBP20.61■□□□□ 0.89
RAB40B-209ENST00000574132 DDR1Q08345 913 aa20.6■□□□□ 0.89
RAB40B-209ENST00000574132 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
RAB40B-209ENST00000574132 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
RAB40B-209ENST00000574132 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
RAB40B-209ENST00000574132 TJP1Q07157 1748 aa20.59■□□□□ 0.89
RAB40B-209ENST00000574132 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
RAB40B-209ENST00000574132 KCNA3P22001 575 aa20.58■□□□□ 0.89
RAB40B-209ENST00000574132 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
RAB40B-209ENST00000574132 CEP350Q5VT06 3117 aa20.58■□□□□ 0.88
RAB40B-209ENST00000574132 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-209ENST00000574132 POLRMTO00411 1230 aaKnown RBP20.57■□□□□ 0.88
RAB40B-209ENST00000574132 CYP19A1P11511 503 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-209ENST00000574132 CHRNA5P30532 468 aa20.57■□□□□ 0.88
RAB40B-209ENST00000574132 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
RAB40B-209ENST00000574132 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
RAB40B-209ENST00000574132 ZBTB1Q9Y2K1 713 aa20.56■□□□□ 0.88
RAB40B-209ENST00000574132 PER1O15534 1290 aaPredicted RBP20.55■□□□□ 0.88
RAB40B-209ENST00000574132 TOMM70O94826 608 aa20.55■□□□□ 0.88
RAB40B-209ENST00000574132 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
RAB40B-209ENST00000574132 TM4SF1P30408 202 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms