RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CABP4P57796 275 aa35.2■■■■□ 3.23
NPLOC4-215ENST00000574095 LINC00116Q8NCU8 138 aa35.2■■■■□ 3.23
NPLOC4-215ENST00000574095 ITPK1Q13572 414 aa35.19■■■■□ 3.22
NPLOC4-215ENST00000574095 SMIM5Q71RC9 77 aa35.17■■■■□ 3.22
NPLOC4-215ENST00000574095 AMIGO3Q86WK7 504 aa35.17■■■■□ 3.22
NPLOC4-215ENST00000574095 FLAD1Q8NFF5 587 aa35.17■■■■□ 3.22
NPLOC4-215ENST00000574095 COL3A1P02461 1466 aaPredicted RBP35.16■■■■□ 3.22
NPLOC4-215ENST00000574095 RBM42Q9BTD8 480 aaKnown RBP35.15■■■■□ 3.22
NPLOC4-215ENST00000574095 UBR3Q6ZT12 1888 aa35.15■■■■□ 3.22
NPLOC4-215ENST00000574095 AKAP4Q5JQC9 854 aa35.14■■■■□ 3.22
NPLOC4-215ENST00000574095 MSL1Q68DK7 614 aa35.14■■■■□ 3.22
NPLOC4-215ENST00000574095 KLHL34Q8N239 644 aa35.14■■■■□ 3.22
NPLOC4-215ENST00000574095 NFATC2IPQ8NCF5 419 aa35.14■■■■□ 3.22
NPLOC4-215ENST00000574095 PHF14O94880 888 aa35.13■■■■□ 3.21
NPLOC4-215ENST00000574095 SLC4A9Q96Q91 983 aa35.13■■■■□ 3.21
NPLOC4-215ENST00000574095 SCN11AQ9UI33 1791 aa35.13■■■■□ 3.21
NPLOC4-215ENST00000574095 U2SURPO15042 1029 aaKnown RBP35.12■■■■□ 3.21
NPLOC4-215ENST00000574095 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.1■■■■□ 3.21
NPLOC4-215ENST00000574095 MTHFSDQ2M296 383 aaKnown RBP35.1■■■■□ 3.21
NPLOC4-215ENST00000574095 MAP3K5Q99683 1374 aa35.1■■■■□ 3.21
NPLOC4-215ENST00000574095 LGR6Q9HBX8 967 aa35.09■■■■□ 3.21
NPLOC4-215ENST00000574095 GNPATO15228 680 aa35.07■■■■□ 3.2
NPLOC4-215ENST00000574095 SSFA2P28290 1259 aa35.06■■■■□ 3.2
NPLOC4-215ENST00000574095 VIRMAQ69YN4 1812 aaKnown RBP35.06■■■■□ 3.2
NPLOC4-215ENST00000574095 ZNF831Q5JPB2 1677 aa35.05■■■■□ 3.2
NPLOC4-215ENST00000574095 PTCD1O75127 700 aaKnown RBP35.05■■■■□ 3.2
NPLOC4-215ENST00000574095 PPP2R1AP30153 589 aa35.04■■■■□ 3.2
NPLOC4-215ENST00000574095 CFAP53Q96M91 514 aa35.04■■■■□ 3.2
NPLOC4-215ENST00000574095 RNMTO43148 476 aaKnown RBP35.03■■■■□ 3.2
NPLOC4-215ENST00000574095 SLC52A2Q9HAB3 445 aa35.02■■■■□ 3.2
NPLOC4-215ENST00000574095 COL5A3P25940 1745 aaPredicted RBP35.01■■■■□ 3.19
NPLOC4-215ENST00000574095 YY1P25490 414 aa34.99■■■■□ 3.19
NPLOC4-215ENST00000574095 NLGN2Q8NFZ4 835 aa34.99■■■■□ 3.19
NPLOC4-215ENST00000574095 RTCBQ9Y3I0 505 aaKnown RBP34.98■■■■□ 3.19
NPLOC4-215ENST00000574095 RC3H1Q5TC82 1133 aaKnown RBP34.97■■■■□ 3.19
NPLOC4-215ENST00000574095 TRAPPC3LQ5T215 181 aa34.95■■■■□ 3.19
NPLOC4-215ENST00000574095 CNTNAP4Q9C0A0 1308 aa34.95■■■■□ 3.19
NPLOC4-215ENST00000574095 ADAMTS7Q9UKP4 1686 aa34.95■■■■□ 3.18
NPLOC4-215ENST00000574095 MYH14Q7Z406 1995 aaKnown RBP34.94■■■■□ 3.18
NPLOC4-215ENST00000574095 SLC39A6Q13433 755 aa34.94■■■■□ 3.18
NPLOC4-215ENST00000574095 NUDCQ9Y266 331 aa34.94■■■■□ 3.18
NPLOC4-215ENST00000574095 MRC1P22897 1456 aa34.94■■■■□ 3.18
NPLOC4-215ENST00000574095 GPR162Q16538 588 aa34.92■■■■□ 3.18
NPLOC4-215ENST00000574095 GAS2L2Q8NHY3 880 aa34.92■■■■□ 3.18
NPLOC4-215ENST00000574095 TJP1Q07157 1748 aa34.92■■■■□ 3.18
NPLOC4-215ENST00000574095 RPS6KA4O75676 772 aa34.91■■■■□ 3.18
NPLOC4-215ENST00000574095 PRKAR2BP31323 418 aa34.91■■■■□ 3.18
NPLOC4-215ENST00000574095 RSPH6AQ9H0K4 717 aa34.91■■■■□ 3.18
NPLOC4-215ENST00000574095 PELP1Q8IZL8 1130 aaKnown RBP34.9■■■■□ 3.18
NPLOC4-215ENST00000574095 ARHGEF1Q92888 912 aaKnown RBP34.9■■■■□ 3.18
NPLOC4-215ENST00000574095 PHACTR3Q96KR7 559 aa34.9■■■■□ 3.18
NPLOC4-215ENST00000574095 UTRNP46939 3433 aa34.9■■■■□ 3.18
NPLOC4-215ENST00000574095 GNAT3A8MTJ3 354 aa34.89■■■■□ 3.18
NPLOC4-215ENST00000574095 U2AF1L5P0DN76 240 aaPredicted RBP34.89■■■■□ 3.18
NPLOC4-215ENST00000574095 U2AF1Q01081 240 aaKnown RBP eCLIP34.89■■■■□ 3.18
NPLOC4-215ENST00000574095 CRKLP46109 303 aaKnown RBP34.88■■■■□ 3.17
NPLOC4-215ENST00000574095 DNAJC10Q8IXB1 793 aa34.87■■■■□ 3.17
NPLOC4-215ENST00000574095 IL17REQ8NFR9 667 aa34.87■■■■□ 3.17
NPLOC4-215ENST00000574095 CD2APQ9Y5K6 639 aa34.87■■■■□ 3.17
NPLOC4-215ENST00000574095 ADRA2BP18089 450 aa34.86■■■■□ 3.17
NPLOC4-215ENST00000574095 CICQ96RK0 1608 aaPredicted RBP34.85■■■■□ 3.17
NPLOC4-215ENST00000574095 RFC4P35249 363 aa34.85■■■■□ 3.17
NPLOC4-215ENST00000574095 KCPQ6ZWJ8 1503 aa34.83■■■■□ 3.17
NPLOC4-215ENST00000574095 TEFQ10587 303 aa34.82■■■■□ 3.16
NPLOC4-215ENST00000574095 INTS5Q6P9B9 1019 aaKnown RBP34.82■■■■□ 3.16
NPLOC4-215ENST00000574095 CHD4Q14839 1912 aa34.81■■■■□ 3.16
NPLOC4-215ENST00000574095 MMP10P09238 476 aa34.81■■■■□ 3.16
NPLOC4-215ENST00000574095 C4AP0C0L4 1744 aa34.81■■■■□ 3.16
NPLOC4-215ENST00000574095 FCHSD2O94868 740 aa34.8■■■■□ 3.16
NPLOC4-215ENST00000574095 NLGN1Q8N2Q7 840 aa34.8■■■■□ 3.16
NPLOC4-215ENST00000574095 GYS1P13807 737 aa34.79■■■■□ 3.16
NPLOC4-215ENST00000574095 GOLGB1Q14789 3259 aaKnown RBP34.79■■■■□ 3.16
NPLOC4-215ENST00000574095 SIPA1L3O60292 1781 aaPredicted RBP34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 UBR2Q8IWV8 1755 aa34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 CYP19A1P11511 503 aaPredicted RBP34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 YBX3P16989 372 aaKnown RBP eCLIP34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 TTC5Q8N0Z6 440 aa34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 CCDC87Q9NVE4 849 aa34.77■■■■□ 3.16
NPLOC4-215ENST00000574095 DDX10Q13206 875 aaKnown RBP34.76■■■■□ 3.16
NPLOC4-215ENST00000574095 VSIG10Q8N0Z9 540 aa34.75■■■■□ 3.15
NPLOC4-215ENST00000574095 SRP68Q9UHB9 627 aaKnown RBP34.75■■■■□ 3.15
NPLOC4-215ENST00000574095 CEMIPQ8WUJ3 1361 aa34.74■■■■□ 3.15
NPLOC4-215ENST00000574095 ZNF790Q6PG37 636 aa34.73■■■■□ 3.15
NPLOC4-215ENST00000574095 ZNF496Q96IT1 587 aaPredicted RBP34.71■■■■□ 3.15
NPLOC4-215ENST00000574095 USP42Q9H9J4 1324 aaKnown RBP34.71■■■■□ 3.15
NPLOC4-215ENST00000574095 ZBTB1Q9Y2K1 713 aa34.7■■■■□ 3.15
NPLOC4-215ENST00000574095 SOS1Q07889 1333 aaPredicted RBP34.7■■■■□ 3.15
NPLOC4-215ENST00000574095 RTF1Q92541 710 aaKnown RBP34.69■■■■□ 3.14
NPLOC4-215ENST00000574095 WWC3Q9ULE0 1092 aa34.69■■■■□ 3.14
NPLOC4-215ENST00000574095 GRIN3BO60391 1043 aa34.68■■■■□ 3.14
NPLOC4-215ENST00000574095 FKBP8Q14318 412 aa34.68■■■■□ 3.14
NPLOC4-215ENST00000574095 MCM10Q7L590 875 aa34.68■■■■□ 3.14
NPLOC4-215ENST00000574095 PARP3Q9Y6F1 533 aa34.68■■■■□ 3.14
NPLOC4-215ENST00000574095 BTBD11A6QL63 1104 aa34.67■■■■□ 3.14
NPLOC4-215ENST00000574095 HEG1Q9ULI3 1381 aa34.66■■■■□ 3.14
NPLOC4-215ENST00000574095 KCNQ3O43525 872 aa34.66■■■■□ 3.14
NPLOC4-215ENST00000574095 DCTN1Q14203 1278 aa34.66■■■■□ 3.14
NPLOC4-215ENST00000574095 CANXP27824 592 aaKnown RBP34.65■■■■□ 3.14
NPLOC4-215ENST00000574095 RALBP1Q15311 655 aa34.65■■■■□ 3.14
NPLOC4-215ENST00000574095 KIF13BQ9NQT8 1826 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms