RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 CYP27B1O15528 508 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 POLD1P28340 1107 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
NDE1-208ENST00000573694 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
NDE1-208ENST00000573694 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
NDE1-208ENST00000573694 ARXQ96QS3 562 aa12.52□□□□□ -0.41
NDE1-208ENST00000573694 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
NDE1-208ENST00000573694 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
NDE1-208ENST00000573694 IGSF1Q8N6C5 1336 aa12.52□□□□□ -0.41
NDE1-208ENST00000573694 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
NDE1-208ENST00000573694 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
NDE1-208ENST00000573694 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
NDE1-208ENST00000573694 FCHSD2O94868 740 aa12.5□□□□□ -0.41
NDE1-208ENST00000573694 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
NDE1-208ENST00000573694 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
NDE1-208ENST00000573694 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
NDE1-208ENST00000573694 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
NDE1-208ENST00000573694 LY75O60449 1722 aa12.5□□□□□ -0.41
NDE1-208ENST00000573694 PKD1L3Q7Z443 1732 aa12.49□□□□□ -0.41
NDE1-208ENST00000573694 E9PSI1 815 aa12.49□□□□□ -0.41
NDE1-208ENST00000573694 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
NDE1-208ENST00000573694 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
NDE1-208ENST00000573694 KDRP35968 1356 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 PHKG2P15735 406 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 RRP1P56182 461 aaKnown RBP12.48□□□□□ -0.41
NDE1-208ENST00000573694 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
NDE1-208ENST00000573694 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
NDE1-208ENST00000573694 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 SSFA2P28290 1259 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
NDE1-208ENST00000573694 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 PIGBQ92521 554 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
NDE1-208ENST00000573694 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
NDE1-208ENST00000573694 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
NDE1-208ENST00000573694 ADRA2BP18089 450 aa12.46□□□□□ -0.41
NDE1-208ENST00000573694 RIPK4P57078 832 aa12.46□□□□□ -0.41
NDE1-208ENST00000573694 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
NDE1-208ENST00000573694 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.41
NDE1-208ENST00000573694 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
NDE1-208ENST00000573694 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
NDE1-208ENST00000573694 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
NDE1-208ENST00000573694 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
NDE1-208ENST00000573694 SIK1P57059 783 aa12.45□□□□□ -0.42
NDE1-208ENST00000573694 FHDC1Q9C0D6 1143 aaPredicted RBP12.45□□□□□ -0.42
NDE1-208ENST00000573694 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
NDE1-208ENST00000573694 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
NDE1-208ENST00000573694 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
NDE1-208ENST00000573694 NEFMP07197 916 aa12.44□□□□□ -0.42
NDE1-208ENST00000573694 YY1P25490 414 aa12.44□□□□□ -0.42
NDE1-208ENST00000573694 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
NDE1-208ENST00000573694 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
NDE1-208ENST00000573694 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
NDE1-208ENST00000573694 AK7Q96M32 723 aa12.43□□□□□ -0.42
NDE1-208ENST00000573694 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
NDE1-208ENST00000573694 PLIN1O60240 522 aa12.42□□□□□ -0.42
NDE1-208ENST00000573694 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
NDE1-208ENST00000573694 TSR2Q969E8 191 aaKnown RBP12.42□□□□□ -0.42
NDE1-208ENST00000573694 IL16Q14005 1332 aa12.41□□□□□ -0.42
NDE1-208ENST00000573694 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
NDE1-208ENST00000573694 ITGB4P16144 1822 aa12.4□□□□□ -0.42
NDE1-208ENST00000573694 CABP4P57796 275 aa12.4□□□□□ -0.42
NDE1-208ENST00000573694 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
NDE1-208ENST00000573694 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
NDE1-208ENST00000573694 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
NDE1-208ENST00000573694 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
NDE1-208ENST00000573694 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
NDE1-208ENST00000573694 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
NDE1-208ENST00000573694 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
NDE1-208ENST00000573694 BCAR3O75815 825 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 PPP4R2Q9NY27 417 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
NDE1-208ENST00000573694 TAF1LQ8IZX4 1826 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 CHD4Q14839 1912 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 C5P01031 1676 aa12.38□□□□□ -0.43
NDE1-208ENST00000573694 UTRNP46939 3433 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
NDE1-208ENST00000573694 MSH5O43196 834 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 TRAPPC3LQ5T215 181 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 EXOC6Q8TAG9 804 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
NDE1-208ENST00000573694 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
NDE1-208ENST00000573694 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms