RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SLC4A9Q96Q91 983 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
CDC27-215ENST00000573550 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
CDC27-215ENST00000573550 RASA1P20936 1047 aa9.37□□□□□ -0.91
CDC27-215ENST00000573550 CRTC2Q53ET0 693 aaPredicted RBP9.37□□□□□ -0.91
CDC27-215ENST00000573550 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
CDC27-215ENST00000573550 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
CDC27-215ENST00000573550 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
CDC27-215ENST00000573550 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
CDC27-215ENST00000573550 SERPINA10Q9UK55 444 aa9.37□□□□□ -0.91
CDC27-215ENST00000573550 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
CDC27-215ENST00000573550 RHOQP17081 205 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 RFX1P22670 979 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 PTK7Q13308 1070 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 MTFR1Q15390 333 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 ZSCAN10Q96SZ4 725 aaPredicted RBP9.36□□□□□ -0.91
CDC27-215ENST00000573550 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
CDC27-215ENST00000573550 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L21D6R901 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 SMTNP53814 917 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
CDC27-215ENST00000573550 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 POU4F2Q12837 409 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 NFX1Q12986 1120 aaKnown RBP9.35□□□□□ -0.91
CDC27-215ENST00000573550 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
CDC27-215ENST00000573550 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
CDC27-215ENST00000573550 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 VEGFBP49765 207 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 EPHA4P54764 986 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
CDC27-215ENST00000573550 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 CCDC155Q8N6L0 562 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
CDC27-215ENST00000573550 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
CDC27-215ENST00000573550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.33□□□□□ -0.92
CDC27-215ENST00000573550 A6NJY4 79 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 H3BM21 787 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 BACH1O14867 736 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
CDC27-215ENST00000573550 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
CDC27-215ENST00000573550 TAS1R3Q7RTX0 852 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 RHBDD1Q8TEB9 315 aa9.33□□□□□ -0.92
CDC27-215ENST00000573550 C4orf17Q53FE4 359 aa9.32□□□□□ -0.92
CDC27-215ENST00000573550 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
CDC27-215ENST00000573550 ARXQ96QS3 562 aa9.32□□□□□ -0.92
CDC27-215ENST00000573550 SFI1A8K8P3 1242 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 M0R2N6 131 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 FOXK2Q01167 660 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 DPYDQ12882 1025 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 CDCA8Q53HL2 280 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 GNASQ5JWF2 1037 aa9.31□□□□□ -0.92
CDC27-215ENST00000573550 SCHIP1Q9P0W5 487 aaPredicted RBP9.31□□□□□ -0.92
CDC27-215ENST00000573550 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
CDC27-215ENST00000573550 CDK2AP1O14519 115 aa9.3□□□□□ -0.92
CDC27-215ENST00000573550 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
CDC27-215ENST00000573550 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
CDC27-215ENST00000573550 TNS4Q8IZW8 715 aa9.3□□□□□ -0.92
CDC27-215ENST00000573550 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
CDC27-215ENST00000573550 ITGA6P23229 1130 aa9.29□□□□□ -0.92
CDC27-215ENST00000573550 PHKA2P46019 1235 aa9.29□□□□□ -0.92
CDC27-215ENST00000573550 SEC13P55735 322 aa9.29□□□□□ -0.92
CDC27-215ENST00000573550 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
CDC27-215ENST00000573550 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
CDC27-215ENST00000573550 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
CDC27-215ENST00000573550 WFS1O76024 890 aa9.28□□□□□ -0.92
CDC27-215ENST00000573550 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
CDC27-215ENST00000573550 TIMMDC1Q9NPL8 285 aa9.28□□□□□ -0.92
CDC27-215ENST00000573550 ZMIZ1Q9ULJ6 1067 aa9.28□□□□□ -0.92
CDC27-215ENST00000573550 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
CDC27-215ENST00000573550 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
CDC27-215ENST00000573550 SLC9A9Q8IVB4 645 aa9.27□□□□□ -0.93
CDC27-215ENST00000573550 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
CDC27-215ENST00000573550 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.93
CDC27-215ENST00000573550 CUEDC1Q9NWM3 386 aaPredicted RBP9.27□□□□□ -0.93
CDC27-215ENST00000573550 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.93
CDC27-215ENST00000573550 ATG7O95352 703 aa9.26□□□□□ -0.93
CDC27-215ENST00000573550 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
CDC27-215ENST00000573550 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
CDC27-215ENST00000573550 NANOS1Q8WY41 292 aaKnown RBP9.26□□□□□ -0.93
CDC27-215ENST00000573550 TSPAN10Q9H1Z9 355 aaPredicted RBP9.26□□□□□ -0.93
CDC27-215ENST00000573550 A0A1B0GTH6 734 aa9.25□□□□□ -0.93
CDC27-215ENST00000573550 TBCELQ5QJ74 424 aa9.25□□□□□ -0.93
CDC27-215ENST00000573550 ZDHHC1Q8WTX9 485 aa9.25□□□□□ -0.93
CDC27-215ENST00000573550 IRF7Q92985 503 aa9.25□□□□□ -0.93
CDC27-215ENST00000573550 C21orf2O43822 256 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms