RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
LINC01996-201ENST00000573270 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
LINC01996-201ENST00000573270 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
LINC01996-201ENST00000573270 TEFQ10587 303 aa17.67■□□□□ 0.42
LINC01996-201ENST00000573270 SLC52A2Q9HAB3 445 aa17.67■□□□□ 0.42
LINC01996-201ENST00000573270 TJP1Q07157 1748 aa17.67■□□□□ 0.42
LINC01996-201ENST00000573270 SOCS7O14512 581 aa17.66■□□□□ 0.42
LINC01996-201ENST00000573270 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
LINC01996-201ENST00000573270 LY75O60449 1722 aa17.66■□□□□ 0.42
LINC01996-201ENST00000573270 EP400Q96L91 3159 aa17.66■□□□□ 0.42
LINC01996-201ENST00000573270 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
LINC01996-201ENST00000573270 CABP4P57796 275 aa17.65■□□□□ 0.42
LINC01996-201ENST00000573270 TMOD3Q9NYL9 352 aa17.65■□□□□ 0.42
LINC01996-201ENST00000573270 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
LINC01996-201ENST00000573270 RGPD3A6NKT7 1758 aaPredicted RBP17.65■□□□□ 0.42
LINC01996-201ENST00000573270 RGPD4Q7Z3J3 1758 aa17.65■□□□□ 0.42
LINC01996-201ENST00000573270 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
LINC01996-201ENST00000573270 PRIM1P49642 420 aaKnown RBP17.64■□□□□ 0.41
LINC01996-201ENST00000573270 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.41
LINC01996-201ENST00000573270 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
LINC01996-201ENST00000573270 IL16Q14005 1332 aa17.64■□□□□ 0.41
LINC01996-201ENST00000573270 KCNQ2O43526 872 aa17.63■□□□□ 0.41
LINC01996-201ENST00000573270 PTF1AQ7RTS3 328 aa17.63■□□□□ 0.41
LINC01996-201ENST00000573270 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
LINC01996-201ENST00000573270 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
LINC01996-201ENST00000573270 IFT57Q9NWB7 429 aa17.63■□□□□ 0.41
LINC01996-201ENST00000573270 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 FAM196AQ6ZSG2 479 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 PIGBQ92521 554 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 FANCIQ9NVI1 1328 aa17.62■□□□□ 0.41
LINC01996-201ENST00000573270 COL5A3P25940 1745 aaPredicted RBP17.61■□□□□ 0.41
LINC01996-201ENST00000573270 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
LINC01996-201ENST00000573270 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
LINC01996-201ENST00000573270 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
LINC01996-201ENST00000573270 BTBD11A6QL63 1104 aa17.6■□□□□ 0.41
LINC01996-201ENST00000573270 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
LINC01996-201ENST00000573270 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
LINC01996-201ENST00000573270 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
LINC01996-201ENST00000573270 TAF7Q15545 349 aaPredicted RBP17.6■□□□□ 0.41
LINC01996-201ENST00000573270 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
LINC01996-201ENST00000573270 RREB1Q92766 1687 aa17.59■□□□□ 0.41
LINC01996-201ENST00000573270 GNAI1P63096 354 aa17.59■□□□□ 0.41
LINC01996-201ENST00000573270 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
LINC01996-201ENST00000573270 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
LINC01996-201ENST00000573270 PALLDQ8WX93 1383 aa17.58■□□□□ 0.4
LINC01996-201ENST00000573270 E9PSI1 815 aa17.58■□□□□ 0.4
LINC01996-201ENST00000573270 KCNQ3O43525 872 aa17.58■□□□□ 0.4
LINC01996-201ENST00000573270 TRIM37O94972 964 aa17.58■□□□□ 0.4
LINC01996-201ENST00000573270 SLFN5Q08AF3 891 aa17.58■□□□□ 0.4
LINC01996-201ENST00000573270 CHL1O00533 1208 aa17.57■□□□□ 0.4
LINC01996-201ENST00000573270 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
LINC01996-201ENST00000573270 ASAP1Q9ULH1 1129 aa17.57■□□□□ 0.4
LINC01996-201ENST00000573270 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
LINC01996-201ENST00000573270 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
LINC01996-201ENST00000573270 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
LINC01996-201ENST00000573270 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
LINC01996-201ENST00000573270 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
LINC01996-201ENST00000573270 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
LINC01996-201ENST00000573270 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
LINC01996-201ENST00000573270 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
LINC01996-201ENST00000573270 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
LINC01996-201ENST00000573270 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
LINC01996-201ENST00000573270 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
LINC01996-201ENST00000573270 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
LINC01996-201ENST00000573270 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.4
LINC01996-201ENST00000573270 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
LINC01996-201ENST00000573270 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
LINC01996-201ENST00000573270 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
LINC01996-201ENST00000573270 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
LINC01996-201ENST00000573270 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
LINC01996-201ENST00000573270 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC01996-201ENST00000573270 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
LINC01996-201ENST00000573270 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
LINC01996-201ENST00000573270 PRAMEF22A3QJZ6 481 aa17.49■□□□□ 0.39
LINC01996-201ENST00000573270 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
LINC01996-201ENST00000573270 APBA3O96018 575 aa17.48■□□□□ 0.39
LINC01996-201ENST00000573270 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
LINC01996-201ENST00000573270 SLC4A9Q96Q91 983 aa17.48■□□□□ 0.39
LINC01996-201ENST00000573270 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
LINC01996-201ENST00000573270 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
LINC01996-201ENST00000573270 SIK1P57059 783 aa17.47■□□□□ 0.39
LINC01996-201ENST00000573270 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
LINC01996-201ENST00000573270 KCNQ4P56696 695 aa17.46■□□□□ 0.39
LINC01996-201ENST00000573270 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
LINC01996-201ENST00000573270 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
LINC01996-201ENST00000573270 ITPK1Q13572 414 aa17.45■□□□□ 0.38
LINC01996-201ENST00000573270 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
LINC01996-201ENST00000573270 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
LINC01996-201ENST00000573270 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
LINC01996-201ENST00000573270 UBR3Q6ZT12 1888 aa17.45■□□□□ 0.38
LINC01996-201ENST00000573270 SF3B2Q13435 895 aaKnown RBP17.44■□□□□ 0.38
LINC01996-201ENST00000573270 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
LINC01996-201ENST00000573270 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
LINC01996-201ENST00000573270 SNRPA1P09661 255 aaKnown RBP17.43■□□□□ 0.38
LINC01996-201ENST00000573270 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
LINC01996-201ENST00000573270 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
LINC01996-201ENST00000573270 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
LINC01996-201ENST00000573270 HOXB7P09629 217 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms