RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 TATP17735 454 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-211ENST00000573212 HSP90AB2PQ58FF8 381 aa11.4□□□□□ -0.58
NPLOC4-211ENST00000573212 USHBP1Q8N6Y0 703 aa11.4□□□□□ -0.58
NPLOC4-211ENST00000573212 RAPGEF4Q8WZA2 1011 aa11.4□□□□□ -0.58
NPLOC4-211ENST00000573212 RTL1A6NKG5 1358 aa11.4□□□□□ -0.59
NPLOC4-211ENST00000573212 CYP27B1O15528 508 aa11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 GGNBP2Q9H3C7 697 aa11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 ATP10DQ9P241 1426 aa11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-211ENST00000573212 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-211ENST00000573212 MPRIPQ6WCQ1 1025 aa11.38□□□□□ -0.59
NPLOC4-211ENST00000573212 INSRP06213 1382 aa11.38□□□□□ -0.59
NPLOC4-211ENST00000573212 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
NPLOC4-211ENST00000573212 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 PIGBQ92521 554 aa11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 ADCY9O60503 1353 aa11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
NPLOC4-211ENST00000573212 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 HSPA6P17066 643 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 SMIM5Q71RC9 77 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
NPLOC4-211ENST00000573212 DOT1LQ8TEK3 1739 aa11.35□□□□□ -0.59
NPLOC4-211ENST00000573212 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-211ENST00000573212 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 SSFA2P28290 1259 aa11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 CARD14Q9BXL6 1004 aa11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
NPLOC4-211ENST00000573212 FLT4P35916 1363 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 KIF3CO14782 793 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 TMF1P82094 1093 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 AK7Q96M32 723 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 TIMELESSQ9UNS1 1208 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
NPLOC4-211ENST00000573212 LOC102724428A0A0B4J2F2 783 aa11.32□□□□□ -0.6
NPLOC4-211ENST00000573212 SIK1P57059 783 aa11.32□□□□□ -0.6
NPLOC4-211ENST00000573212 ITPK1Q13572 414 aa11.32□□□□□ -0.6
NPLOC4-211ENST00000573212 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
NPLOC4-211ENST00000573212 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 PHF14O94880 888 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 EYA1Q99502 592 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
NPLOC4-211ENST00000573212 PRR29P0C7W0 189 aa11.3□□□□□ -0.6
NPLOC4-211ENST00000573212 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-211ENST00000573212 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
NPLOC4-211ENST00000573212 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
NPLOC4-211ENST00000573212 C5P01031 1676 aa11.3□□□□□ -0.6
NPLOC4-211ENST00000573212 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 PHKG2P15735 406 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 TGFB2P61812 414 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 DNAJC5GQ8N7S2 189 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
NPLOC4-211ENST00000573212 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 GNPATO15228 680 aa11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
NPLOC4-211ENST00000573212 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
NPLOC4-211ENST00000573212 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
NPLOC4-211ENST00000573212 MMP10P09238 476 aa11.27□□□□□ -0.61
NPLOC4-211ENST00000573212 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.61
NPLOC4-211ENST00000573212 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
NPLOC4-211ENST00000573212 MAP2P11137 1827 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-211ENST00000573212 TOMM70O94826 608 aa11.26□□□□□ -0.61
NPLOC4-211ENST00000573212 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
NPLOC4-211ENST00000573212 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-211ENST00000573212 A0A0G2JLW4 131 aa11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 ERVV-2B6SEH9 535 aa11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 KCNA3P22001 575 aa11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 APLP1P51693 650 aa11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
NPLOC4-211ENST00000573212 UBR3Q6ZT12 1888 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 GYS1P13807 737 aa11.24□□□□□ -0.61
NPLOC4-211ENST00000573212 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms