RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ERC2O15083 957 aa13.8□□□□□ -0.2
RPAIN-212ENST00000573126 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
RPAIN-212ENST00000573126 MRE11P49959 708 aa13.8□□□□□ -0.2
RPAIN-212ENST00000573126 PKP1Q13835 747 aa13.8□□□□□ -0.2
RPAIN-212ENST00000573126 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
RPAIN-212ENST00000573126 MAP3K5Q99683 1374 aa13.8□□□□□ -0.2
RPAIN-212ENST00000573126 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
RPAIN-212ENST00000573126 RRAGDQ9NQL2 400 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-212ENST00000573126 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
RPAIN-212ENST00000573126 GNAI3P08754 354 aa13.79□□□□□ -0.2
RPAIN-212ENST00000573126 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-212ENST00000573126 GAS2L3Q86XJ1 694 aa13.79□□□□□ -0.2
RPAIN-212ENST00000573126 OSBPL3Q9H4L5 887 aa13.79□□□□□ -0.2
RPAIN-212ENST00000573126 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
RPAIN-212ENST00000573126 ST18O60284 1047 aa13.78□□□□□ -0.2
RPAIN-212ENST00000573126 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
RPAIN-212ENST00000573126 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
RPAIN-212ENST00000573126 PHAXQ9H814 394 aaKnown RBP13.78□□□□□ -0.2
RPAIN-212ENST00000573126 PLEKHG5O94827 1062 aa13.77□□□□□ -0.2
RPAIN-212ENST00000573126 MX1P20591 662 aa13.77□□□□□ -0.2
RPAIN-212ENST00000573126 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.2
RPAIN-212ENST00000573126 GOLGA6L22H0YM25 854 aa13.77□□□□□ -0.21
RPAIN-212ENST00000573126 SKOR2Q2VWA4 1001 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-212ENST00000573126 NWD1Q149M9 1564 aa13.77□□□□□ -0.21
RPAIN-212ENST00000573126 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
RPAIN-212ENST00000573126 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
RPAIN-212ENST00000573126 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
RPAIN-212ENST00000573126 USP44Q9H0E7 712 aa13.77□□□□□ -0.21
RPAIN-212ENST00000573126 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
RPAIN-212ENST00000573126 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
RPAIN-212ENST00000573126 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
RPAIN-212ENST00000573126 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-212ENST00000573126 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
RPAIN-212ENST00000573126 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
RPAIN-212ENST00000573126 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
RPAIN-212ENST00000573126 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
RPAIN-212ENST00000573126 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-212ENST00000573126 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 NEK4P51957 841 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
RPAIN-212ENST00000573126 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 PTMSP20962 102 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 NUCB2P80303 420 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 CLEC17AQ6ZS10 378 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
RPAIN-212ENST00000573126 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
RPAIN-212ENST00000573126 CYP2E1P05181 493 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-212ENST00000573126 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
RPAIN-212ENST00000573126 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
RPAIN-212ENST00000573126 KCNQ3O43525 872 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 ANXA1P04083 346 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
RPAIN-212ENST00000573126 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 CHAMP1Q96JM3 812 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 CHMLP26374 656 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
RPAIN-212ENST00000573126 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
RPAIN-212ENST00000573126 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
RPAIN-212ENST00000573126 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 IP6K1Q92551 441 aa13.71□□□□□ -0.21
RPAIN-212ENST00000573126 CWC22Q9HCG8 908 aaKnown RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 SURF6O75683 361 aaKnown RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 NBPF7P0C2Y1 421 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-212ENST00000573126 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
RPAIN-212ENST00000573126 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
RPAIN-212ENST00000573126 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.21
RPAIN-212ENST00000573126 MAP4K4O95819 1239 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-212ENST00000573126 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
RPAIN-212ENST00000573126 PSME1Q06323 249 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 IL25Q9H293 177 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 ZDHHC9Q9Y397 364 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-212ENST00000573126 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 SSH3Q8TE77 659 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
RPAIN-212ENST00000573126 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 STAP2Q9UGK3 403 aa13.7□□□□□ -0.22
RPAIN-212ENST00000573126 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
RPAIN-212ENST00000573126 LMBRD1Q9NUN5 540 aa13.69□□□□□ -0.22
RPAIN-212ENST00000573126 TEFQ10587 303 aa13.69□□□□□ -0.22
RPAIN-212ENST00000573126 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-212ENST00000573126 SETD1BQ9UPS6 1966 aaKnown RBP13.68□□□□□ -0.22
RPAIN-212ENST00000573126 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
RPAIN-212ENST00000573126 MCCP23508 829 aa13.68□□□□□ -0.22
RPAIN-212ENST00000573126 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms