RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 ATF5Q9Y2D1 282 aaPredicted RBP24.05■■□□□ 1.44
PFN1-202ENST00000572383 MAP3K5Q99683 1374 aa24.04■■□□□ 1.44
PFN1-202ENST00000572383 SCN11AQ9UI33 1791 aa24.04■■□□□ 1.44
PFN1-202ENST00000572383 KCNQ4P56696 695 aa24.04■■□□□ 1.44
PFN1-202ENST00000572383 MTFR1LQ9H019 292 aa24.04■■□□□ 1.44
PFN1-202ENST00000572383 PNNQ9H307 717 aaKnown RBP24.04■■□□□ 1.44
PFN1-202ENST00000572383 CCNL1Q9UK58 526 aaPredicted RBP24.04■■□□□ 1.44
PFN1-202ENST00000572383 ADAMTS8Q9UP79 889 aa24.04■■□□□ 1.44
PFN1-202ENST00000572383 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
PFN1-202ENST00000572383 RNMTO43148 476 aaKnown RBP24.03■■□□□ 1.44
PFN1-202ENST00000572383 NEFMP07197 916 aa24.03■■□□□ 1.44
PFN1-202ENST00000572383 HMGB2P26583 209 aaKnown RBP24.03■■□□□ 1.44
PFN1-202ENST00000572383 CABP4P57796 275 aa24.03■■□□□ 1.44
PFN1-202ENST00000572383 VIRMAQ69YN4 1812 aaKnown RBP24.03■■□□□ 1.44
PFN1-202ENST00000572383 ADAMTS7Q9UKP4 1686 aa24.02■■□□□ 1.44
PFN1-202ENST00000572383 SGIP1Q9BQI5 828 aa24.02■■□□□ 1.44
PFN1-202ENST00000572383 SMARCC1Q92922 1105 aaPredicted RBP24.01■■□□□ 1.43
PFN1-202ENST00000572383 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
PFN1-202ENST00000572383 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
PFN1-202ENST00000572383 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
PFN1-202ENST00000572383 CCDC146Q8IYE0 955 aa24■■□□□ 1.43
PFN1-202ENST00000572383 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
PFN1-202ENST00000572383 IL17REQ8NFR9 667 aa24■■□□□ 1.43
PFN1-202ENST00000572383 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
PFN1-202ENST00000572383 CHD4Q14839 1912 aa24■■□□□ 1.43
PFN1-202ENST00000572383 TFCP2L1Q9NZI6 479 aa23.99■■□□□ 1.43
PFN1-202ENST00000572383 ASAP1Q9ULH1 1129 aa23.99■■□□□ 1.43
PFN1-202ENST00000572383 SLC16A10Q8TF71 515 aa23.98■■□□□ 1.43
PFN1-202ENST00000572383 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
PFN1-202ENST00000572383 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
PFN1-202ENST00000572383 MRC1P22897 1456 aa23.98■■□□□ 1.43
PFN1-202ENST00000572383 NFE2L2Q16236 605 aa23.97■■□□□ 1.43
PFN1-202ENST00000572383 PNPLA7Q6ZV29 1317 aa23.97■■□□□ 1.43
PFN1-202ENST00000572383 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
PFN1-202ENST00000572383 PNISRQ8TF01 805 aaKnown RBP23.96■■□□□ 1.43
PFN1-202ENST00000572383 RUNDC1Q96C34 613 aa23.96■■□□□ 1.43
PFN1-202ENST00000572383 MCM10Q7L590 875 aa23.95■■□□□ 1.42
PFN1-202ENST00000572383 DCTN1Q14203 1278 aa23.94■■□□□ 1.42
PFN1-202ENST00000572383 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
PFN1-202ENST00000572383 RTF1Q92541 710 aaKnown RBP23.94■■□□□ 1.42
PFN1-202ENST00000572383 DLG5Q8TDM6 1919 aa23.94■■□□□ 1.42
PFN1-202ENST00000572383 CEMIPQ8WUJ3 1361 aa23.93■■□□□ 1.42
PFN1-202ENST00000572383 HTATSF1O43719 755 aaKnown RBP23.92■■□□□ 1.42
PFN1-202ENST00000572383 TEFQ10587 303 aa23.92■■□□□ 1.42
PFN1-202ENST00000572383 FHDC1Q9C0D6 1143 aaPredicted RBP23.92■■□□□ 1.42
PFN1-202ENST00000572383 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
PFN1-202ENST00000572383 RRP7AQ9Y3A4 280 aaKnown RBP23.91■■□□□ 1.42
PFN1-202ENST00000572383 RIPK4P57078 832 aa23.9■■□□□ 1.42
PFN1-202ENST00000572383 SYT17Q9BSW7 474 aa23.9■■□□□ 1.42
PFN1-202ENST00000572383 UTRNP46939 3433 aa23.89■■□□□ 1.42
PFN1-202ENST00000572383 SIPA1L3O60292 1781 aaPredicted RBP23.89■■□□□ 1.42
PFN1-202ENST00000572383 LOC102724428A0A0B4J2F2 783 aa23.89■■□□□ 1.41
PFN1-202ENST00000572383 SIK1P57059 783 aa23.89■■□□□ 1.41
PFN1-202ENST00000572383 SLC39A6Q13433 755 aa23.89■■□□□ 1.41
PFN1-202ENST00000572383 ARXQ96QS3 562 aa23.89■■□□□ 1.41
PFN1-202ENST00000572383 NEUROD2Q15784 382 aa23.88■■□□□ 1.41
PFN1-202ENST00000572383 FLAD1Q8NFF5 587 aa23.88■■□□□ 1.41
PFN1-202ENST00000572383 RBM42Q9BTD8 480 aaKnown RBP23.88■■□□□ 1.41
PFN1-202ENST00000572383 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
PFN1-202ENST00000572383 ZNF831Q5JPB2 1677 aa23.87■■□□□ 1.41
PFN1-202ENST00000572383 PTCD1O75127 700 aaKnown RBP23.87■■□□□ 1.41
PFN1-202ENST00000572383 SLC4A9Q96Q91 983 aa23.87■■□□□ 1.41
PFN1-202ENST00000572383 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
PFN1-202ENST00000572383 DCAF8L1A6NGE4 600 aa23.86■■□□□ 1.41
PFN1-202ENST00000572383 POLD1P28340 1107 aa23.86■■□□□ 1.41
PFN1-202ENST00000572383 ATP6V1AP38606 617 aa23.86■■□□□ 1.41
PFN1-202ENST00000572383 COL23A1Q86Y22 540 aaPredicted RBP23.86■■□□□ 1.41
PFN1-202ENST00000572383 ITPK1Q13572 414 aa23.85■■□□□ 1.41
PFN1-202ENST00000572383 APAF1O14727 1248 aa23.84■■□□□ 1.41
PFN1-202ENST00000572383 MSH5O43196 834 aa23.84■■□□□ 1.41
PFN1-202ENST00000572383 FAM9BQ8IZU0 186 aa23.84■■□□□ 1.41
PFN1-202ENST00000572383 AK7Q96M32 723 aa23.84■■□□□ 1.41
PFN1-202ENST00000572383 BTBD11A6QL63 1104 aa23.83■■□□□ 1.41
PFN1-202ENST00000572383 KCPQ6ZWJ8 1503 aa23.83■■□□□ 1.41
PFN1-202ENST00000572383 LMOD3Q0VAK6 560 aa23.82■■□□□ 1.4
PFN1-202ENST00000572383 ZNF790Q6PG37 636 aa23.82■■□□□ 1.4
PFN1-202ENST00000572383 LINC00116Q8NCU8 138 aa23.82■■□□□ 1.4
PFN1-202ENST00000572383 TRIM35Q9UPQ4 493 aa23.82■■□□□ 1.4
PFN1-202ENST00000572383 MYH14Q7Z406 1995 aaKnown RBP23.82■■□□□ 1.4
PFN1-202ENST00000572383 TAF7Q15545 349 aaPredicted RBP23.81■■□□□ 1.4
PFN1-202ENST00000572383 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
PFN1-202ENST00000572383 MIER1Q8N108 512 aa23.81■■□□□ 1.4
PFN1-202ENST00000572383 UBR2Q8IWV8 1755 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 SENP3-EIF4A1A0A087X0R7 540 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 CCER2I3L3R5 266 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 KCNQ3O43525 872 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 YY1P25490 414 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 AMIGO3Q86WK7 504 aa23.8■■□□□ 1.4
PFN1-202ENST00000572383 MIS18AQ9NYP9 233 aa23.79■■□□□ 1.4
PFN1-202ENST00000572383 TJP1Q07157 1748 aa23.79■■□□□ 1.4
PFN1-202ENST00000572383 SSFA2P28290 1259 aa23.78■■□□□ 1.4
PFN1-202ENST00000572383 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
PFN1-202ENST00000572383 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
PFN1-202ENST00000572383 C4AP0C0L4 1744 aa23.76■■□□□ 1.39
PFN1-202ENST00000572383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.76■■□□□ 1.39
PFN1-202ENST00000572383 CICQ96RK0 1608 aaPredicted RBP23.76■■□□□ 1.39
PFN1-202ENST00000572383 SMIM5Q71RC9 77 aa23.75■■□□□ 1.39
PFN1-202ENST00000572383 DNAJC10Q8IXB1 793 aa23.75■■□□□ 1.39
PFN1-202ENST00000572383 GNPATO15228 680 aa23.74■■□□□ 1.39
PFN1-202ENST00000572383 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms