RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
TSR1-202ENST00000571806 PLEKHO1Q53GL0 409 aaPredicted RBP21.3■■□□□ 1
TSR1-202ENST00000571806 ATG3Q9NT62 314 aa21.3■■□□□ 1
TSR1-202ENST00000571806 GNPATO15228 680 aa21.29■■□□□ 1
TSR1-202ENST00000571806 ZNF831Q5JPB2 1677 aa21.28■■□□□ 1
TSR1-202ENST00000571806 AMIGO3Q86WK7 504 aa21.28■■□□□ 1
TSR1-202ENST00000571806 ITPK1Q13572 414 aa21.27■■□□□ 1
TSR1-202ENST00000571806 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
TSR1-202ENST00000571806 MORC1Q86VD1 984 aa21.26■□□□□ 0.99
TSR1-202ENST00000571806 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
TSR1-202ENST00000571806 ADRA2BP18089 450 aa21.25■□□□□ 0.99
TSR1-202ENST00000571806 TRAPPC3LQ5T215 181 aa21.25■□□□□ 0.99
TSR1-202ENST00000571806 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
TSR1-202ENST00000571806 KNSTRNQ9Y448 316 aa21.25■□□□□ 0.99
TSR1-202ENST00000571806 CABP4P57796 275 aa21.24■□□□□ 0.99
TSR1-202ENST00000571806 KDRP35968 1356 aa21.23■□□□□ 0.99
TSR1-202ENST00000571806 C1orf141Q5JVX7 400 aa21.23■□□□□ 0.99
TSR1-202ENST00000571806 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
TSR1-202ENST00000571806 NLGN1Q8N2Q7 840 aa21.23■□□□□ 0.99
TSR1-202ENST00000571806 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
TSR1-202ENST00000571806 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
TSR1-202ENST00000571806 MTHFSP49914 203 aa21.22■□□□□ 0.99
TSR1-202ENST00000571806 SMIM5Q71RC9 77 aa21.22■□□□□ 0.99
TSR1-202ENST00000571806 CNTNAP4Q9C0A0 1308 aa21.21■□□□□ 0.99
TSR1-202ENST00000571806 RPS6KA4O75676 772 aa21.19■□□□□ 0.98
TSR1-202ENST00000571806 MMP10P09238 476 aa21.19■□□□□ 0.98
TSR1-202ENST00000571806 TGFB2P61812 414 aa21.19■□□□□ 0.98
TSR1-202ENST00000571806 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
TSR1-202ENST00000571806 RFC4P35249 363 aa21.18■□□□□ 0.98
TSR1-202ENST00000571806 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
TSR1-202ENST00000571806 GPBP1L1Q9HC44 474 aaPredicted RBP21.18■□□□□ 0.98
TSR1-202ENST00000571806 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
TSR1-202ENST00000571806 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
TSR1-202ENST00000571806 ARHGEF1Q92888 912 aaKnown RBP21.17■□□□□ 0.98
TSR1-202ENST00000571806 COL5A3P25940 1745 aaPredicted RBP21.17■□□□□ 0.98
TSR1-202ENST00000571806 ADCY9O60503 1353 aa21.16■□□□□ 0.98
TSR1-202ENST00000571806 IL13P35225 146 aa21.16■□□□□ 0.98
TSR1-202ENST00000571806 KIF13BQ9NQT8 1826 aa21.15■□□□□ 0.98
TSR1-202ENST00000571806 AEBP1Q8IUX7 1158 aa21.15■□□□□ 0.98
TSR1-202ENST00000571806 NFATC2IPQ8NCF5 419 aa21.15■□□□□ 0.98
TSR1-202ENST00000571806 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
TSR1-202ENST00000571806 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
TSR1-202ENST00000571806 GYS1P13807 737 aa21.13■□□□□ 0.97
TSR1-202ENST00000571806 AKAP4Q5JQC9 854 aa21.13■□□□□ 0.97
TSR1-202ENST00000571806 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
TSR1-202ENST00000571806 PARP3Q9Y6F1 533 aa21.13■□□□□ 0.97
TSR1-202ENST00000571806 CICQ96RK0 1608 aaPredicted RBP21.12■□□□□ 0.97
TSR1-202ENST00000571806 PXDNLA1KZ92 1463 aa21.11■□□□□ 0.97
TSR1-202ENST00000571806 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
TSR1-202ENST00000571806 C10orf71Q711Q0 1435 aa21.1■□□□□ 0.97
TSR1-202ENST00000571806 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
TSR1-202ENST00000571806 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
TSR1-202ENST00000571806 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
TSR1-202ENST00000571806 MYH14Q7Z406 1995 aaKnown RBP21.08■□□□□ 0.96
TSR1-202ENST00000571806 KIF7Q2M1P5 1343 aa21.07■□□□□ 0.96
TSR1-202ENST00000571806 A0A0G2JLW4 131 aa21.07■□□□□ 0.96
TSR1-202ENST00000571806 SLC52A2Q9HAB3 445 aa21.07■□□□□ 0.96
TSR1-202ENST00000571806 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
TSR1-202ENST00000571806 KIAA1551Q9HCM1 1747 aa21.07■□□□□ 0.96
TSR1-202ENST00000571806 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
TSR1-202ENST00000571806 ZNF526Q8TF50 670 aaPredicted RBP21.06■□□□□ 0.96
TSR1-202ENST00000571806 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
TSR1-202ENST00000571806 PER1O15534 1290 aaPredicted RBP21.05■□□□□ 0.96
TSR1-202ENST00000571806 TJP1Q07157 1748 aa21.04■□□□□ 0.96
TSR1-202ENST00000571806 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
TSR1-202ENST00000571806 DPEP1P16444 411 aa21.04■□□□□ 0.96
TSR1-202ENST00000571806 ZPR1O75312 459 aa21.03■□□□□ 0.96
TSR1-202ENST00000571806 FCHSD2O94868 740 aa21.03■□□□□ 0.96
TSR1-202ENST00000571806 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
TSR1-202ENST00000571806 PIM2Q9P1W9 311 aa21.03■□□□□ 0.96
TSR1-202ENST00000571806 MRC1P22897 1456 aa21.02■□□□□ 0.96
TSR1-202ENST00000571806 RNMTO43148 476 aaKnown RBP21.02■□□□□ 0.96
TSR1-202ENST00000571806 ARHGAP27Q6ZUM4 889 aa21.02■□□□□ 0.96
TSR1-202ENST00000571806 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.96
TSR1-202ENST00000571806 LGR6Q9HBX8 967 aa21.02■□□□□ 0.96
TSR1-202ENST00000571806 HMOX1P09601 288 aa21.01■□□□□ 0.95
TSR1-202ENST00000571806 HSPA6P17066 643 aa21.01■□□□□ 0.95
TSR1-202ENST00000571806 FKBP8Q14318 412 aa21.01■□□□□ 0.95
TSR1-202ENST00000571806 SRP68Q9UHB9 627 aaKnown RBP21.01■□□□□ 0.95
TSR1-202ENST00000571806 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
TSR1-202ENST00000571806 BRCA1P38398 1863 aaKnown RBP21■□□□□ 0.95
TSR1-202ENST00000571806 CYP19A1P11511 503 aaPredicted RBP20.99■□□□□ 0.95
TSR1-202ENST00000571806 KCNA3P22001 575 aa20.99■□□□□ 0.95
TSR1-202ENST00000571806 TM4SF1P30408 202 aa20.99■□□□□ 0.95
TSR1-202ENST00000571806 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
TSR1-202ENST00000571806 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
TSR1-202ENST00000571806 DNAJC10Q8IXB1 793 aa20.99■□□□□ 0.95
TSR1-202ENST00000571806 KIF3CO14782 793 aa20.98■□□□□ 0.95
TSR1-202ENST00000571806 DALRD3Q5D0E6 543 aaKnown RBP20.98■□□□□ 0.95
TSR1-202ENST00000571806 ARFGEF1Q9Y6D6 1849 aa20.98■□□□□ 0.95
TSR1-202ENST00000571806 ADAMTS7Q9UKP4 1686 aa20.98■□□□□ 0.95
TSR1-202ENST00000571806 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
TSR1-202ENST00000571806 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
TSR1-202ENST00000571806 POLRMTO00411 1230 aaKnown RBP20.97■□□□□ 0.95
TSR1-202ENST00000571806 NARFQ9UHQ1 456 aa20.97■□□□□ 0.95
TSR1-202ENST00000571806 DDR1Q08345 913 aa20.96■□□□□ 0.95
TSR1-202ENST00000571806 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
TSR1-202ENST00000571806 USPL1Q5W0Q7 1092 aa20.96■□□□□ 0.95
TSR1-202ENST00000571806 CEP350Q5VT06 3117 aa20.95■□□□□ 0.95
TSR1-202ENST00000571806 TOMM70O94826 608 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms