RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PKD1L3Q7Z443 1732 aa24.64■■□□□ 1.53
RPAIN-210ENST00000571613 ZBTB40Q9NUA8 1239 aa24.62■■□□□ 1.53
RPAIN-210ENST00000571613 KDM3BQ7LBC6 1761 aa24.62■■□□□ 1.53
RPAIN-210ENST00000571613 PARP4Q9UKK3 1724 aaKnown RBP24.62■■□□□ 1.53
RPAIN-210ENST00000571613 IL2RBP14784 551 aa24.62■■□□□ 1.53
RPAIN-210ENST00000571613 COL14A1Q05707 1796 aaKnown RBP24.62■■□□□ 1.53
RPAIN-210ENST00000571613 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
RPAIN-210ENST00000571613 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
RPAIN-210ENST00000571613 STRN4Q9NRL3 753 aa24.61■■□□□ 1.53
RPAIN-210ENST00000571613 INTS3Q68E01 1043 aaKnown RBP24.6■■□□□ 1.53
RPAIN-210ENST00000571613 ZCRB1Q8TBF4 217 aaKnown RBP24.6■■□□□ 1.53
RPAIN-210ENST00000571613 SLC52A2Q9HAB3 445 aa24.6■■□□□ 1.53
RPAIN-210ENST00000571613 PCDHB15Q9Y5E8 787 aa24.6■■□□□ 1.53
RPAIN-210ENST00000571613 CACNA1FO60840 1977 aa24.59■■□□□ 1.53
RPAIN-210ENST00000571613 PHLPP1O60346 1717 aa24.59■■□□□ 1.53
RPAIN-210ENST00000571613 HDGFL1Q5TGJ6 251 aa24.59■■□□□ 1.53
RPAIN-210ENST00000571613 LARP1Q6PKG0 1096 aaKnown RBP24.59■■□□□ 1.53
RPAIN-210ENST00000571613 ZBTB7BO15156 539 aaPredicted RBP24.58■■□□□ 1.53
RPAIN-210ENST00000571613 CYP27B1O15528 508 aa24.58■■□□□ 1.53
RPAIN-210ENST00000571613 IGHDP01880 384 aa24.58■■□□□ 1.53
RPAIN-210ENST00000571613 HDAC1Q13547 482 aaPredicted RBP24.58■■□□□ 1.53
RPAIN-210ENST00000571613 BTG4Q9NY30 223 aa24.58■■□□□ 1.53
RPAIN-210ENST00000571613 KDM6AO15550 1401 aaPredicted RBP24.57■■□□□ 1.52
RPAIN-210ENST00000571613 SCN11AQ9UI33 1791 aa24.57■■□□□ 1.52
RPAIN-210ENST00000571613 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
RPAIN-210ENST00000571613 VIRMAQ69YN4 1812 aaKnown RBP24.57■■□□□ 1.52
RPAIN-210ENST00000571613 SIPA1L3O60292 1781 aaPredicted RBP24.56■■□□□ 1.52
RPAIN-210ENST00000571613 MRC1P22897 1456 aa24.55■■□□□ 1.52
RPAIN-210ENST00000571613 HEG1Q9ULI3 1381 aa24.55■■□□□ 1.52
RPAIN-210ENST00000571613 CCT4P50991 539 aaKnown RBP24.54■■□□□ 1.52
RPAIN-210ENST00000571613 RGS12O14924 1447 aa24.54■■□□□ 1.52
RPAIN-210ENST00000571613 UBAP1LF5GYI3 381 aa24.53■■□□□ 1.52
RPAIN-210ENST00000571613 PIP4K2BP78356 416 aa24.53■■□□□ 1.52
RPAIN-210ENST00000571613 FLIIQ13045 1269 aa24.53■■□□□ 1.52
RPAIN-210ENST00000571613 NKX1-1Q15270 411 aaPredicted RBP24.53■■□□□ 1.52
RPAIN-210ENST00000571613 ZNF790Q6PG37 636 aa24.53■■□□□ 1.52
RPAIN-210ENST00000571613 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
RPAIN-210ENST00000571613 GIGYF1O75420 1035 aaPredicted RBP24.52■■□□□ 1.52
RPAIN-210ENST00000571613 CABP4P57796 275 aa24.52■■□□□ 1.52
RPAIN-210ENST00000571613 ERVV-2B6SEH9 535 aa24.51■■□□□ 1.51
RPAIN-210ENST00000571613 KCNQ3O43525 872 aa24.51■■□□□ 1.51
RPAIN-210ENST00000571613 NFATC2IPQ8NCF5 419 aa24.51■■□□□ 1.51
RPAIN-210ENST00000571613 EIF2S2P20042 333 aaKnown RBP24.5■■□□□ 1.51
RPAIN-210ENST00000571613 FKBP5Q13451 457 aaPredicted RBP24.5■■□□□ 1.51
RPAIN-210ENST00000571613 G2E3Q7L622 706 aa24.5■■□□□ 1.51
RPAIN-210ENST00000571613 TTC5Q8N0Z6 440 aa24.5■■□□□ 1.51
RPAIN-210ENST00000571613 DBF4Q9UBU7 674 aaPredicted RBP24.5■■□□□ 1.51
RPAIN-210ENST00000571613 NECTIN2Q92692 538 aa24.47■■□□□ 1.51
RPAIN-210ENST00000571613 CDCA7Q9BWT1 371 aaPredicted RBP24.47■■□□□ 1.51
RPAIN-210ENST00000571613 PXDNLA1KZ92 1463 aa24.46■■□□□ 1.51
RPAIN-210ENST00000571613 FMNL2Q96PY5 1086 aa24.45■■□□□ 1.5
RPAIN-210ENST00000571613 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
RPAIN-210ENST00000571613 SMC5Q8IY18 1101 aa24.44■■□□□ 1.5
RPAIN-210ENST00000571613 HYPKQ9NX55 129 aa24.44■■□□□ 1.5
RPAIN-210ENST00000571613 CHPF2Q9P2E5 772 aa24.44■■□□□ 1.5
RPAIN-210ENST00000571613 RBM19Q9Y4C8 960 aaKnown RBP24.44■■□□□ 1.5
RPAIN-210ENST00000571613 SLC4A10Q6U841 1118 aa24.43■■□□□ 1.5
RPAIN-210ENST00000571613 USP35Q9P2H5 1018 aa24.43■■□□□ 1.5
RPAIN-210ENST00000571613 DISP2A7MBM2 1401 aa24.43■■□□□ 1.5
RPAIN-210ENST00000571613 SNRPA1P09661 255 aaKnown RBP24.43■■□□□ 1.5
RPAIN-210ENST00000571613 RPAP2Q8IXW5 612 aaPredicted RBP24.43■■□□□ 1.5
RPAIN-210ENST00000571613 DDX54Q8TDD1 881 aaKnown RBP24.43■■□□□ 1.5
RPAIN-210ENST00000571613 GCC1Q96CN9 775 aa24.43■■□□□ 1.5
RPAIN-210ENST00000571613 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
RPAIN-210ENST00000571613 JCADQ9P266 1359 aa24.41■■□□□ 1.5
RPAIN-210ENST00000571613 SLC39A6Q13433 755 aa24.41■■□□□ 1.5
RPAIN-210ENST00000571613 PLCH1Q4KWH8 1693 aa24.41■■□□□ 1.5
RPAIN-210ENST00000571613 F6X3S4 739 aa24.4■■□□□ 1.5
RPAIN-210ENST00000571613 GNAI3P08754 354 aa24.4■■□□□ 1.5
RPAIN-210ENST00000571613 DDX21Q9NR30 783 aaKnown RBP eCLIP24.4■■□□□ 1.5
RPAIN-210ENST00000571613 PDZRN3Q9UPQ7 1066 aa24.4■■□□□ 1.5
RPAIN-210ENST00000571613 EXOC5O00471 708 aa24.39■■□□□ 1.49
RPAIN-210ENST00000571613 ZNF496Q96IT1 587 aaPredicted RBP24.39■■□□□ 1.49
RPAIN-210ENST00000571613 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.49
RPAIN-210ENST00000571613 DDX58O95786 925 aaKnown RBP24.38■■□□□ 1.49
RPAIN-210ENST00000571613 RGS3P49796 1198 aa24.38■■□□□ 1.49
RPAIN-210ENST00000571613 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
RPAIN-210ENST00000571613 NUTM2BA6NNL0 878 aaPredicted RBP24.37■■□□□ 1.49
RPAIN-210ENST00000571613 NUTM2EB1AL46 878 aaPredicted RBP24.37■■□□□ 1.49
RPAIN-210ENST00000571613 NUTM2AQ8IVF1 878 aaPredicted RBP24.37■■□□□ 1.49
RPAIN-210ENST00000571613 SHANK3Q9BYB0 1731 aa24.37■■□□□ 1.49
RPAIN-210ENST00000571613 NWD2Q9ULI1 1742 aa24.37■■□□□ 1.49
RPAIN-210ENST00000571613 ANKRD44Q8N8A2 993 aa24.37■■□□□ 1.49
RPAIN-210ENST00000571613 DNAAF4Q8WXU2 420 aa24.37■■□□□ 1.49
RPAIN-210ENST00000571613 PDE4AP27815 886 aa24.36■■□□□ 1.49
RPAIN-210ENST00000571613 MEIS3Q99687 375 aa24.36■■□□□ 1.49
RPAIN-210ENST00000571613 C1orf115Q9H7X2 142 aa24.36■■□□□ 1.49
RPAIN-210ENST00000571613 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
RPAIN-210ENST00000571613 GNAI2P04899 355 aa24.35■■□□□ 1.49
RPAIN-210ENST00000571613 SRCIN1Q9C0H9 1055 aa24.35■■□□□ 1.49
RPAIN-210ENST00000571613 SLIT2O94813 1529 aa24.35■■□□□ 1.49
RPAIN-210ENST00000571613 ERBB4Q15303 1308 aa24.35■■□□□ 1.49
RPAIN-210ENST00000571613 NRAPQ86VF7 1730 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 HMMRO75330 724 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 N4BP2Q86UW6 1770 aaPredicted RBP24.34■■□□□ 1.49
RPAIN-210ENST00000571613 ATP10DQ9P241 1426 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 KSR2Q6VAB6 950 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 BACH2Q9BYV9 841 aa24.34■■□□□ 1.49
RPAIN-210ENST00000571613 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms