RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
SMG6-209ENST00000571442 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
SMG6-209ENST00000571442 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
SMG6-209ENST00000571442 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
SMG6-209ENST00000571442 C5P01031 1676 aa9.31□□□□□ -0.92
SMG6-209ENST00000571442 CEMIPQ8WUJ3 1361 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 CABP4P57796 275 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 MCM10Q7L590 875 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
SMG6-209ENST00000571442 SLC52A2Q9HAB3 445 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 TJP1Q07157 1748 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 KCPQ6ZWJ8 1503 aa9.3□□□□□ -0.92
SMG6-209ENST00000571442 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 KCNQ3O43525 872 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 ITPK1Q13572 414 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 SMIM5Q71RC9 77 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 PNISRQ8TF01 805 aaKnown RBP9.29□□□□□ -0.92
SMG6-209ENST00000571442 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 CCNL1Q9UK58 526 aaPredicted RBP9.29□□□□□ -0.92
SMG6-209ENST00000571442 RRP7AQ9Y3A4 280 aaKnown RBP9.29□□□□□ -0.92
SMG6-209ENST00000571442 CASZ1Q86V15 1759 aa9.29□□□□□ -0.92
SMG6-209ENST00000571442 COL5A3P25940 1745 aaPredicted RBP9.28□□□□□ -0.92
SMG6-209ENST00000571442 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
SMG6-209ENST00000571442 LOC102724428A0A0B4J2F2 783 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 SIK1P57059 783 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMG6-209ENST00000571442 NFE2L2Q16236 605 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
SMG6-209ENST00000571442 TMPOP42166 694 aaKnown RBP9.27□□□□□ -0.93
SMG6-209ENST00000571442 SLC15A2Q16348 729 aa9.27□□□□□ -0.93
SMG6-209ENST00000571442 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
SMG6-209ENST00000571442 UBR3Q6ZT12 1888 aa9.27□□□□□ -0.93
SMG6-209ENST00000571442 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.93
SMG6-209ENST00000571442 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 QSER1Q2KHR3 1735 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
SMG6-209ENST00000571442 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
SMG6-209ENST00000571442 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
SMG6-209ENST00000571442 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 TRIM35Q9UPQ4 493 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
SMG6-209ENST00000571442 APAF1O14727 1248 aa9.25□□□□□ -0.93
SMG6-209ENST00000571442 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
SMG6-209ENST00000571442 RIPK4P57078 832 aa9.25□□□□□ -0.93
SMG6-209ENST00000571442 NEUROD2Q15784 382 aa9.25□□□□□ -0.93
SMG6-209ENST00000571442 PNPLA7Q6ZV29 1317 aa9.25□□□□□ -0.93
SMG6-209ENST00000571442 PRAMEF22A3QJZ6 481 aa9.24□□□□□ -0.93
SMG6-209ENST00000571442 HTATSF1O43719 755 aaKnown RBP9.24□□□□□ -0.93
SMG6-209ENST00000571442 TEFQ10587 303 aa9.24□□□□□ -0.93
SMG6-209ENST00000571442 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
SMG6-209ENST00000571442 DNAJC10Q8IXB1 793 aa9.24□□□□□ -0.93
SMG6-209ENST00000571442 MIER1Q8N108 512 aa9.24□□□□□ -0.93
SMG6-209ENST00000571442 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
SMG6-209ENST00000571442 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
SMG6-209ENST00000571442 STK32BQ9NY57 414 aa9.24□□□□□ -0.93
SMG6-209ENST00000571442 BTBD11A6QL63 1104 aa9.23□□□□□ -0.93
SMG6-209ENST00000571442 ZNF790Q6PG37 636 aa9.23□□□□□ -0.93
SMG6-209ENST00000571442 COL23A1Q86Y22 540 aaPredicted RBP9.23□□□□□ -0.93
SMG6-209ENST00000571442 PNNQ9H307 717 aaKnown RBP9.23□□□□□ -0.93
SMG6-209ENST00000571442 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
SMG6-209ENST00000571442 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
SMG6-209ENST00000571442 NEFMP07197 916 aa9.22□□□□□ -0.93
SMG6-209ENST00000571442 FAM9BQ8IZU0 186 aa9.22□□□□□ -0.93
SMG6-209ENST00000571442 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
SMG6-209ENST00000571442 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
SMG6-209ENST00000571442 ZBTB7AO95365 584 aa9.21□□□□□ -0.94
SMG6-209ENST00000571442 CYP19A1P11511 503 aaPredicted RBP9.21□□□□□ -0.94
SMG6-209ENST00000571442 TAF7Q15545 349 aaPredicted RBP9.21□□□□□ -0.94
SMG6-209ENST00000571442 INTS5Q6P9B9 1019 aaKnown RBP9.21□□□□□ -0.94
SMG6-209ENST00000571442 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.94
SMG6-209ENST00000571442 CNTNAP4Q9C0A0 1308 aa9.21□□□□□ -0.94
SMG6-209ENST00000571442 GNPATO15228 680 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 PHF14O94880 888 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 CRKLP46109 303 aaKnown RBP9.2□□□□□ -0.94
SMG6-209ENST00000571442 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 SPON1Q9HCB6 807 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
SMG6-209ENST00000571442 ZBTB1Q9Y2K1 713 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 USP16Q9Y5T5 823 aa9.2□□□□□ -0.94
SMG6-209ENST00000571442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
SMG6-209ENST00000571442 PTGER2P43116 358 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
SMG6-209ENST00000571442 EIF4A1P60842 406 aaKnown RBP9.19□□□□□ -0.94
SMG6-209ENST00000571442 TTC5Q8N0Z6 440 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 AK7Q96M32 723 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 SALL2Q9Y467 1007 aaPredicted RBP9.19□□□□□ -0.94
SMG6-209ENST00000571442 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
SMG6-209ENST00000571442 CCER2I3L3R5 266 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 CHL1O00533 1208 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms