RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 PNPLA7Q6ZV29 1317 aa14.9□□□□□ -0.02
SMG6-206ENST00000570668 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
SMG6-206ENST00000570668 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
SMG6-206ENST00000570668 MTFR1LQ9H019 292 aa14.89□□□□□ -0.03
SMG6-206ENST00000570668 SLC52A2Q9HAB3 445 aa14.89□□□□□ -0.03
SMG6-206ENST00000570668 ADAMTS7Q9UKP4 1686 aa14.89□□□□□ -0.03
SMG6-206ENST00000570668 SLC16A10Q8TF71 515 aa14.88□□□□□ -0.03
SMG6-206ENST00000570668 MRC1P22897 1456 aa14.88□□□□□ -0.03
SMG6-206ENST00000570668 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 MAP3K5Q99683 1374 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 GNAT3A8MTJ3 354 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 PTGER2P43116 358 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 ITPK1Q13572 414 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
SMG6-206ENST00000570668 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
SMG6-206ENST00000570668 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
SMG6-206ENST00000570668 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
SMG6-206ENST00000570668 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
SMG6-206ENST00000570668 SGIP1Q9BQI5 828 aa14.86□□□□□ -0.03
SMG6-206ENST00000570668 VIRMAQ69YN4 1812 aaKnown RBP14.86□□□□□ -0.03
SMG6-206ENST00000570668 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
SMG6-206ENST00000570668 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
SMG6-206ENST00000570668 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
SMG6-206ENST00000570668 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
SMG6-206ENST00000570668 AK7Q96M32 723 aa14.85□□□□□ -0.03
SMG6-206ENST00000570668 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
SMG6-206ENST00000570668 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
SMG6-206ENST00000570668 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
SMG6-206ENST00000570668 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
SMG6-206ENST00000570668 PPP1R1BQ9UD71 204 aaPredicted RBP14.84□□□□□ -0.03
SMG6-206ENST00000570668 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
SMG6-206ENST00000570668 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
SMG6-206ENST00000570668 SSFA2P28290 1259 aa14.82□□□□□ -0.04
SMG6-206ENST00000570668 TEFQ10587 303 aa14.82□□□□□ -0.04
SMG6-206ENST00000570668 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
SMG6-206ENST00000570668 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
SMG6-206ENST00000570668 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
SMG6-206ENST00000570668 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
SMG6-206ENST00000570668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
SMG6-206ENST00000570668 SLC39A6Q13433 755 aa14.81□□□□□ -0.04
SMG6-206ENST00000570668 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
SMG6-206ENST00000570668 CNTNAP4Q9C0A0 1308 aa14.81□□□□□ -0.04
SMG6-206ENST00000570668 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
SMG6-206ENST00000570668 GNPATO15228 680 aa14.8□□□□□ -0.04
SMG6-206ENST00000570668 MSH5O43196 834 aa14.8□□□□□ -0.04
SMG6-206ENST00000570668 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
SMG6-206ENST00000570668 NEFMP07197 916 aa14.8□□□□□ -0.04
SMG6-206ENST00000570668 CICQ96RK0 1608 aaPredicted RBP14.8□□□□□ -0.04
SMG6-206ENST00000570668 SIPA1L3O60292 1781 aaPredicted RBP14.79□□□□□ -0.04
SMG6-206ENST00000570668 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
SMG6-206ENST00000570668 RTF1Q92541 710 aaKnown RBP14.79□□□□□ -0.04
SMG6-206ENST00000570668 ARXQ96QS3 562 aa14.79□□□□□ -0.04
SMG6-206ENST00000570668 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
SMG6-206ENST00000570668 PHF14O94880 888 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 POLD1P28340 1107 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 RTCBQ9Y3I0 505 aaKnown RBP14.78□□□□□ -0.04
SMG6-206ENST00000570668 TJP1Q07157 1748 aa14.78□□□□□ -0.04
SMG6-206ENST00000570668 RPS6KA4O75676 772 aa14.77□□□□□ -0.05
SMG6-206ENST00000570668 MCM10Q7L590 875 aa14.77□□□□□ -0.05
SMG6-206ENST00000570668 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
SMG6-206ENST00000570668 TTC5Q8N0Z6 440 aa14.77□□□□□ -0.05
SMG6-206ENST00000570668 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
SMG6-206ENST00000570668 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
SMG6-206ENST00000570668 CRKLP46109 303 aaKnown RBP14.76□□□□□ -0.05
SMG6-206ENST00000570668 NFE2L2Q16236 605 aa14.76□□□□□ -0.05
SMG6-206ENST00000570668 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
SMG6-206ENST00000570668 BTBD11A6QL63 1104 aa14.75□□□□□ -0.05
SMG6-206ENST00000570668 CYP19A1P11511 503 aaPredicted RBP14.75□□□□□ -0.05
SMG6-206ENST00000570668 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
SMG6-206ENST00000570668 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
SMG6-206ENST00000570668 INTS5Q6P9B9 1019 aaKnown RBP14.75□□□□□ -0.05
SMG6-206ENST00000570668 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
SMG6-206ENST00000570668 SYT17Q9BSW7 474 aa14.75□□□□□ -0.05
SMG6-206ENST00000570668 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
SMG6-206ENST00000570668 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
SMG6-206ENST00000570668 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
SMG6-206ENST00000570668 HEG1Q9ULI3 1381 aa14.73□□□□□ -0.05
SMG6-206ENST00000570668 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMG6-206ENST00000570668 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
SMG6-206ENST00000570668 CCDC87Q9NVE4 849 aa14.73□□□□□ -0.05
SMG6-206ENST00000570668 KCNQ3O43525 872 aa14.72□□□□□ -0.05
SMG6-206ENST00000570668 RFC4P35249 363 aa14.72□□□□□ -0.05
SMG6-206ENST00000570668 TAF7Q15545 349 aaPredicted RBP14.72□□□□□ -0.05
SMG6-206ENST00000570668 TEX13AQ9BXU3 409 aaPredicted RBP14.72□□□□□ -0.05
SMG6-206ENST00000570668 ADAMTS8Q9UP79 889 aa14.72□□□□□ -0.05
SMG6-206ENST00000570668 STARD3NLO95772 234 aa14.71□□□□□ -0.05
SMG6-206ENST00000570668 SOS1Q07889 1333 aaPredicted RBP14.7□□□□□ -0.06
SMG6-206ENST00000570668 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
SMG6-206ENST00000570668 RIPK4P57078 832 aa14.7□□□□□ -0.06
SMG6-206ENST00000570668 NLGN1Q8N2Q7 840 aa14.7□□□□□ -0.06
SMG6-206ENST00000570668 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
SMG6-206ENST00000570668 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
SMG6-206ENST00000570668 C4AP0C0L4 1744 aa14.69□□□□□ -0.06
SMG6-206ENST00000570668 GYS1P13807 737 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms