RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 IL2RBP14784 551 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 AMOTQ4VCS5 1084 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 TCP11L2Q8N4U5 519 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 FBXO22Q8NEZ5 403 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
CTDNEP1-204ENST00000570484 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.03
CTDNEP1-204ENST00000570484 MEGF6O75095 1541 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 OVOS2A0A0G2JMS6 1433 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 APAF1O14727 1248 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 VPS72Q15906 364 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 ZNF772Q68DY9 489 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 NGEFQ8N5V2 710 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 THRAP3Q9Y2W1 955 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 BCL9LQ86UU0 1499 aa8.64□□□□□ -1.03
CTDNEP1-204ENST00000570484 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 ZBED9Q6R2W3 1325 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 PCDH11XQ9BZA7 1347 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 PCDH11YQ9BZA8 1340 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 NFE2L2Q16236 605 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 RRP7AQ9Y3A4 280 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
CTDNEP1-204ENST00000570484 MAP3K5Q99683 1374 aa8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 CALD1Q05682 793 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 RGPD5Q99666 1765 aa8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 DISP2A7MBM2 1401 aa8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 ATRNO75882 1429 aa8.62□□□□□ -1.03
CTDNEP1-204ENST00000570484 TMPOP42166 694 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-204ENST00000570484 RIPK4P57078 832 aa8.61□□□□□ -1.03
CTDNEP1-204ENST00000570484 PHACTR3Q96KR7 559 aa8.61□□□□□ -1.03
CTDNEP1-204ENST00000570484 GNAT3A8MTJ3 354 aa8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 DDB1Q16531 1140 aa8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 MTHFSDQ2M296 383 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 AKAP4Q5JQC9 854 aa8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 ZCRB1Q8TBF4 217 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 PKD1L3Q7Z443 1732 aa8.6□□□□□ -1.03
CTDNEP1-204ENST00000570484 WNK3Q9BYP7 1800 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 LRRC37A3O60309 1634 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 RGPD2P0DJD1 1756 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 CCDC27Q2M243 656 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 GJD4Q96KN9 370 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 QTRT2Q9H974 415 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
CTDNEP1-204ENST00000570484 GLI3P10071 1580 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 EXOC5O00471 708 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 HTATSF1O43719 755 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 TEFQ10587 303 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 TSHZ2Q9NRE2 1034 aa8.58□□□□□ -1.04
CTDNEP1-204ENST00000570484 THSD7AQ9UPZ6 1657 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 PHKG2P15735 406 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 RBM6P78332 1123 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 IER5LQ5T953 404 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 MYH16Q9H6N6 1097 aa8.57□□□□□ -1.04
CTDNEP1-204ENST00000570484 E9PSI1 815 aa8.56□□□□□ -1.04
CTDNEP1-204ENST00000570484 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-204ENST00000570484 MCM10Q7L590 875 aa8.56□□□□□ -1.04
CTDNEP1-204ENST00000570484 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
CTDNEP1-204ENST00000570484 LAS1LQ9Y4W2 734 aaKnown RBP8.56□□□□□ -1.04
CTDNEP1-204ENST00000570484 IL16Q14005 1332 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 CYP27B1O15528 508 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 POTEIP0CG38 1075 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 RXRBP28702 533 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 GNAI1P63096 354 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 DCTN1Q14203 1278 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 THUMPD2Q9BTF0 503 aaKnown RBP8.55□□□□□ -1.04
CTDNEP1-204ENST00000570484 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms