RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
RBFOX1-220ENST00000570188 COL18A1P39060 1754 aa12.72□□□□□ -0.37
RBFOX1-220ENST00000570188 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
RBFOX1-220ENST00000570188 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
RBFOX1-220ENST00000570188 IER5LQ5T953 404 aa12.72□□□□□ -0.37
RBFOX1-220ENST00000570188 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
RBFOX1-220ENST00000570188 GCP02774 474 aa12.71□□□□□ -0.37
RBFOX1-220ENST00000570188 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-220ENST00000570188 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
RBFOX1-220ENST00000570188 ABCC6O95255 1503 aa12.71□□□□□ -0.38
RBFOX1-220ENST00000570188 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 E9PSI1 815 aa12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 GPR37O15354 613 aa12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 IP6K1Q92551 441 aa12.7□□□□□ -0.38
RBFOX1-220ENST00000570188 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 KDRP35968 1356 aa12.69□□□□□ -0.38
RBFOX1-220ENST00000570188 G3V3G9 751 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 RIPK4P57078 832 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 WDR63Q8IWG1 891 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 LTV1Q96GA3 475 aaPredicted RBP12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
RBFOX1-220ENST00000570188 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
RBFOX1-220ENST00000570188 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-220ENST00000570188 EYA1Q99502 592 aa12.67□□□□□ -0.38
RBFOX1-220ENST00000570188 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
RBFOX1-220ENST00000570188 PLCG2P16885 1265 aa12.66□□□□□ -0.38
RBFOX1-220ENST00000570188 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-220ENST00000570188 LRRC37A3O60309 1634 aa12.65□□□□□ -0.38
RBFOX1-220ENST00000570188 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
RBFOX1-220ENST00000570188 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-220ENST00000570188 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
RBFOX1-220ENST00000570188 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
RBFOX1-220ENST00000570188 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
RBFOX1-220ENST00000570188 IL16Q14005 1332 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 TRIM66O15016 1216 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 CPDO75976 1380 aa12.63□□□□□ -0.39
RBFOX1-220ENST00000570188 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
RBFOX1-220ENST00000570188 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-220ENST00000570188 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
RBFOX1-220ENST00000570188 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
RBFOX1-220ENST00000570188 CALD1Q05682 793 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-220ENST00000570188 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-220ENST00000570188 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
RBFOX1-220ENST00000570188 PDE4DQ08499 809 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 NBPF6Q5VWK0 638 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 NBPF4Q96M43 638 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 AXIN2Q9Y2T1 843 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 ERBB3P21860 1342 aa12.6□□□□□ -0.39
RBFOX1-220ENST00000570188 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
RBFOX1-220ENST00000570188 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
RBFOX1-220ENST00000570188 MTHFSDQ2M296 383 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-220ENST00000570188 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
RBFOX1-220ENST00000570188 THUMPD2Q9BTF0 503 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-220ENST00000570188 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
RBFOX1-220ENST00000570188 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
RBFOX1-220ENST00000570188 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-220ENST00000570188 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
RBFOX1-220ENST00000570188 TOM1O60784 492 aa12.57□□□□□ -0.4
RBFOX1-220ENST00000570188 GNAI1P63096 354 aa12.57□□□□□ -0.4
RBFOX1-220ENST00000570188 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
RBFOX1-220ENST00000570188 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
RBFOX1-220ENST00000570188 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-220ENST00000570188 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 SCN11AQ9UI33 1791 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 WNK3Q9BYP7 1800 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 OSBPP22059 807 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-220ENST00000570188 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 MCM10Q7L590 875 aa12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms