RNA–Protein interactions for RNA: ENST00000570015.1

CISTR-201, chondrogenesis-associated transcript, humanhuman

TSL 2 BASIC

Gene CISTR, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-201ENST00000570015 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
CISTR-201ENST00000570015 PIGBQ92521 554 aa15.36■□□□□ 0.05
CISTR-201ENST00000570015 DOT1LQ8TEK3 1739 aa15.35■□□□□ 0.05
CISTR-201ENST00000570015 ERVV-2B6SEH9 535 aa15.35■□□□□ 0.05
CISTR-201ENST00000570015 APBA3O96018 575 aa15.35■□□□□ 0.05
CISTR-201ENST00000570015 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
CISTR-201ENST00000570015 LAS1LQ9Y4W2 734 aaKnown RBP15.35■□□□□ 0.05
CISTR-201ENST00000570015 E9PSI1 815 aa15.34■□□□□ 0.05
CISTR-201ENST00000570015 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
CISTR-201ENST00000570015 SLC52A2Q9HAB3 445 aa15.34■□□□□ 0.05
CISTR-201ENST00000570015 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
CISTR-201ENST00000570015 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
CISTR-201ENST00000570015 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
CISTR-201ENST00000570015 ZNF853P0CG23 659 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 GNAI1P63096 354 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 SLFN5Q08AF3 891 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 SLC39A6Q13433 755 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
CISTR-201ENST00000570015 KDM3BQ7LBC6 1761 aa15.32■□□□□ 0.04
CISTR-201ENST00000570015 ITGB4P16144 1822 aa15.32■□□□□ 0.04
CISTR-201ENST00000570015 CHL1O00533 1208 aa15.32■□□□□ 0.04
CISTR-201ENST00000570015 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
CISTR-201ENST00000570015 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
CISTR-201ENST00000570015 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
CISTR-201ENST00000570015 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
CISTR-201ENST00000570015 BTBD11A6QL63 1104 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 KCNQ3O43525 872 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
CISTR-201ENST00000570015 DEFB132Q7Z7B7 95 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
CISTR-201ENST00000570015 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
CISTR-201ENST00000570015 SBF2Q86WG5 1849 aa15.3■□□□□ 0.04
CISTR-201ENST00000570015 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
CISTR-201ENST00000570015 KCNQ4P56696 695 aa15.29■□□□□ 0.04
CISTR-201ENST00000570015 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
CISTR-201ENST00000570015 DUSP27Q5VZP5 1158 aa15.29■□□□□ 0.04
CISTR-201ENST00000570015 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
CISTR-201ENST00000570015 PTCD1O75127 700 aaKnown RBP15.28■□□□□ 0.04
CISTR-201ENST00000570015 BAG6P46379 1132 aa15.28■□□□□ 0.04
CISTR-201ENST00000570015 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
CISTR-201ENST00000570015 PALLDQ8WX93 1383 aa15.27■□□□□ 0.04
CISTR-201ENST00000570015 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
CISTR-201ENST00000570015 TTC5Q8N0Z6 440 aa15.27■□□□□ 0.04
CISTR-201ENST00000570015 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
CISTR-201ENST00000570015 BTAF1O14981 1849 aa15.27■□□□□ 0.03
CISTR-201ENST00000570015 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
CISTR-201ENST00000570015 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
CISTR-201ENST00000570015 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
CISTR-201ENST00000570015 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
CISTR-201ENST00000570015 TNS1Q9HBL0 1735 aaKnown RBP15.25■□□□□ 0.03
CISTR-201ENST00000570015 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
CISTR-201ENST00000570015 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
CISTR-201ENST00000570015 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
CISTR-201ENST00000570015 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
CISTR-201ENST00000570015 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
CISTR-201ENST00000570015 LOC102724428A0A0B4J2F2 783 aa15.23■□□□□ 0.03
CISTR-201ENST00000570015 CT47B1P0C2W7 299 aaPredicted RBP15.23■□□□□ 0.03
CISTR-201ENST00000570015 SIK1P57059 783 aa15.23■□□□□ 0.03
CISTR-201ENST00000570015 TXNRD1Q16881 649 aa15.23■□□□□ 0.03
CISTR-201ENST00000570015 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
CISTR-201ENST00000570015 CAMKK2Q96RR4 588 aa15.23■□□□□ 0.03
CISTR-201ENST00000570015 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
CISTR-201ENST00000570015 PLSCR1O15162 318 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
CISTR-201ENST00000570015 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 EIF4A1P60842 406 aaKnown RBP15.22■□□□□ 0.03
CISTR-201ENST00000570015 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 PROM2Q8N271 834 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
CISTR-201ENST00000570015 EP400Q96L91 3159 aa15.21■□□□□ 0.03
CISTR-201ENST00000570015 HOXB7P09629 217 aa15.21■□□□□ 0.03
CISTR-201ENST00000570015 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
CISTR-201ENST00000570015 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
CISTR-201ENST00000570015 LRRC4BQ9NT99 713 aa15.21■□□□□ 0.03
CISTR-201ENST00000570015 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 SOCS7O14512 581 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 ITPK1Q13572 414 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 LAMB4A4D0S4 1761 aa15.2■□□□□ 0.02
CISTR-201ENST00000570015 ELL2O00472 640 aaPredicted RBP15.19■□□□□ 0.02
CISTR-201ENST00000570015 C8orf58Q8NAV2 365 aa15.19■□□□□ 0.02
CISTR-201ENST00000570015 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
CISTR-201ENST00000570015 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
CISTR-201ENST00000570015 NECTIN2Q92692 538 aa15.18■□□□□ 0.02
CISTR-201ENST00000570015 C5P01031 1676 aa15.18■□□□□ 0.02
CISTR-201ENST00000570015 LY75O60449 1722 aa15.17■□□□□ 0.02
CISTR-201ENST00000570015 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
CISTR-201ENST00000570015 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
CISTR-201ENST00000570015 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
CISTR-201ENST00000570015 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
CISTR-201ENST00000570015 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
CISTR-201ENST00000570015 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
CISTR-201ENST00000570015 VAMP4O75379 141 aa15.16■□□□□ 0.02
CISTR-201ENST00000570015 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
CISTR-201ENST00000570015 EIF2S2P20042 333 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms