RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TRERF1Q96PN7 1200 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
UBR1-211ENST00000569971 CUEDC1Q9NWM3 386 aaPredicted RBP6.57□□□□□ -1.36
UBR1-211ENST00000569971 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
UBR1-211ENST00000569971 SPATA31C2B4DYI2 1134 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 BCRP11274 1271 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 CFAP70Q5T0N1 1121 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 PRICKLE2Q7Z3G6 844 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 PPP1R12CQ9BZL4 782 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 IGF1RP08069 1367 aa6.56□□□□□ -1.36
UBR1-211ENST00000569971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.55□□□□□ -1.36
UBR1-211ENST00000569971 CLN3Q13286 438 aa6.55□□□□□ -1.36
UBR1-211ENST00000569971 ALYREFQ86V81 257 aaKnown RBP6.55□□□□□ -1.36
UBR1-211ENST00000569971 BEND7Q8N7W2 519 aaPredicted RBP6.55□□□□□ -1.36
UBR1-211ENST00000569971 PBXIP1Q96AQ6 731 aa6.55□□□□□ -1.36
UBR1-211ENST00000569971 A0A1W2PRU2 124 aa6.54□□□□□ -1.36
UBR1-211ENST00000569971 PALM3A6NDB9 673 aaPredicted RBP6.54□□□□□ -1.36
UBR1-211ENST00000569971 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
UBR1-211ENST00000569971 NLRP3Q96P20 1036 aa6.54□□□□□ -1.36
UBR1-211ENST00000569971 GRIP2Q9C0E4 1043 aa6.54□□□□□ -1.36
UBR1-211ENST00000569971 TFIP11Q9UBB9 837 aaKnown RBP6.54□□□□□ -1.36
UBR1-211ENST00000569971 GIGYF1O75420 1035 aaPredicted RBP6.53□□□□□ -1.36
UBR1-211ENST00000569971 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
UBR1-211ENST00000569971 SEMA3FQ13275 785 aa6.53□□□□□ -1.36
UBR1-211ENST00000569971 DBN1Q16643 649 aa6.53□□□□□ -1.36
UBR1-211ENST00000569971 NBPF10Q6P3W6 841 aaKnown RBP6.53□□□□□ -1.36
UBR1-211ENST00000569971 NBPF15Q8N660 670 aa6.53□□□□□ -1.36
UBR1-211ENST00000569971 PCDHB9Q9Y5E1 797 aa6.53□□□□□ -1.36
UBR1-211ENST00000569971 MEN1O00255 615 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 MSTNO14793 375 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 FBXO45P0C2W1 286 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 RHOQP17081 205 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 MAP2K3P46734 347 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 LBRQ14739 615 aaKnown RBP6.52□□□□□ -1.37
UBR1-211ENST00000569971 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 SLC27A3Q5K4L6 730 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 UCN2Q96RP3 112 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 CFHR5Q9BXR6 569 aa6.52□□□□□ -1.37
UBR1-211ENST00000569971 ESF1Q9H501 851 aaKnown RBP6.52□□□□□ -1.37
UBR1-211ENST00000569971 MX2P20592 715 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 SOX11P35716 441 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 NR1H3Q13133 447 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 PLA2G4EQ3MJ16 856 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 RIPOR1Q6ZS17 1223 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 TAS1R3Q7RTX0 852 aa6.51□□□□□ -1.37
UBR1-211ENST00000569971 CCDC9Q9Y3X0 531 aaKnown RBP6.51□□□□□ -1.37
UBR1-211ENST00000569971 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
UBR1-211ENST00000569971 OIP5O43482 229 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 GNRH1P01148 92 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 F11P03951 625 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 PDE4CQ08493 712 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 NEDD1Q8NHV4 660 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 GTPBP3Q969Y2 492 aaKnown RBP6.5□□□□□ -1.37
UBR1-211ENST00000569971 ACDQ96AP0 544 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 NUCKS1Q9H1E3 243 aaKnown RBP6.5□□□□□ -1.37
UBR1-211ENST00000569971 PHF24Q9UPV7 400 aa6.5□□□□□ -1.37
UBR1-211ENST00000569971 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
UBR1-211ENST00000569971 GPR25O00155 361 aa6.49□□□□□ -1.37
UBR1-211ENST00000569971 EIF4G2P78344 907 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBR1-211ENST00000569971 TBC1D9Q6ZT07 1266 aa6.49□□□□□ -1.37
UBR1-211ENST00000569971 SPOCK3Q9BQ16 436 aa6.49□□□□□ -1.37
UBR1-211ENST00000569971 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
UBR1-211ENST00000569971 GDF2Q9UK05 429 aaPredicted RBP6.49□□□□□ -1.37
UBR1-211ENST00000569971 A0A1B0GTH6 734 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 ADAM23O75077 832 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 CSB-PGBD3P0DP91 1061 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 POU4F2Q12837 409 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
UBR1-211ENST00000569971 GAS2L1Q99501 681 aaPredicted RBP6.48□□□□□ -1.37
UBR1-211ENST00000569971 ESYT1Q9BSJ8 1104 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 OXCT2Q9BYC2 517 aaPredicted RBP6.48□□□□□ -1.37
UBR1-211ENST00000569971 GZF1Q9H116 711 aaPredicted RBP6.48□□□□□ -1.37
UBR1-211ENST00000569971 OSBPL3Q9H4L5 887 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 CNTNAP5Q8WYK1 1306 aa6.48□□□□□ -1.37
UBR1-211ENST00000569971 PIK3R2O00459 728 aa6.47□□□□□ -1.37
UBR1-211ENST00000569971 PROCP04070 461 aa6.47□□□□□ -1.37
UBR1-211ENST00000569971 ARHGEF10LQ9HCE6 1279 aa6.47□□□□□ -1.37
UBR1-211ENST00000569971 PCDHB11Q9Y5F2 797 aa6.47□□□□□ -1.37
UBR1-211ENST00000569971 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
UBR1-211ENST00000569971 SCTRP47872 440 aa6.46□□□□□ -1.38
UBR1-211ENST00000569971 MKL2Q9ULH7 1088 aa6.46□□□□□ -1.38
UBR1-211ENST00000569971 PIK3CDO00329 1044 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 ATP9BO43861 1147 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 MYCP01106 439 aaPredicted RBP6.45□□□□□ -1.38
UBR1-211ENST00000569971 ITGB2P05107 769 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 CNKSR1Q969H4 720 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 USTQ9Y2C2 406 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 HRH3Q9Y5N1 445 aa6.45□□□□□ -1.38
UBR1-211ENST00000569971 ATG7O95352 703 aa6.44□□□□□ -1.38
UBR1-211ENST00000569971 GTF2E1P29083 439 aaPredicted RBP6.44□□□□□ -1.38
UBR1-211ENST00000569971 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
UBR1-211ENST00000569971 ESCO1Q5FWF5 840 aa6.44□□□□□ -1.38
UBR1-211ENST00000569971 GOLGA6L1Q8N7Z2 621 aa6.44□□□□□ -1.38
UBR1-211ENST00000569971 GALNT6Q8NCL4 622 aa6.44□□□□□ -1.38
UBR1-211ENST00000569971 ATXN7L1Q9ULK2 861 aaPredicted RBP6.44□□□□□ -1.38
UBR1-211ENST00000569971 BRD1O95696 1058 aa6.43□□□□□ -1.38
UBR1-211ENST00000569971 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
UBR1-211ENST00000569971 KANK4Q5T7N3 995 aaPredicted RBP6.43□□□□□ -1.38
UBR1-211ENST00000569971 XAGE2Q96GT9 111 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms