RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SNPHO15079 494 aa13.25□□□□□ -0.29
GDE1-205ENST00000569899 AMPHP49418 695 aa13.25□□□□□ -0.29
GDE1-205ENST00000569899 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
GDE1-205ENST00000569899 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
GDE1-205ENST00000569899 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
GDE1-205ENST00000569899 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
GDE1-205ENST00000569899 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 GCP02774 474 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 HOXC9P31274 260 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.29
GDE1-205ENST00000569899 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 ZBTB7CA1YPR0 619 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
GDE1-205ENST00000569899 SALL2Q9Y467 1007 aaPredicted RBP13.24□□□□□ -0.29
GDE1-205ENST00000569899 ABCC6O95255 1503 aa13.23□□□□□ -0.29
GDE1-205ENST00000569899 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
GDE1-205ENST00000569899 ANO8Q9HCE9 1232 aaPredicted RBP13.23□□□□□ -0.29
GDE1-205ENST00000569899 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
GDE1-205ENST00000569899 APAF1O14727 1248 aa13.22□□□□□ -0.29
GDE1-205ENST00000569899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
GDE1-205ENST00000569899 LMO7Q8WWI1 1683 aa13.22□□□□□ -0.29
GDE1-205ENST00000569899 HMOX1P09601 288 aa13.21□□□□□ -0.29
GDE1-205ENST00000569899 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
GDE1-205ENST00000569899 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
GDE1-205ENST00000569899 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
GDE1-205ENST00000569899 PTGER2P43116 358 aa13.21□□□□□ -0.3
GDE1-205ENST00000569899 TOM1O60784 492 aa13.2□□□□□ -0.3
GDE1-205ENST00000569899 NUDT7P0C024 238 aa13.2□□□□□ -0.3
GDE1-205ENST00000569899 ZC3H6P61129 1189 aaKnown RBP13.2□□□□□ -0.3
GDE1-205ENST00000569899 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
GDE1-205ENST00000569899 IP6K1Q92551 441 aa13.2□□□□□ -0.3
GDE1-205ENST00000569899 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
GDE1-205ENST00000569899 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
GDE1-205ENST00000569899 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
GDE1-205ENST00000569899 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
GDE1-205ENST00000569899 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
GDE1-205ENST00000569899 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
GDE1-205ENST00000569899 DDX12PQ92771 950 aa13.19□□□□□ -0.3
GDE1-205ENST00000569899 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
GDE1-205ENST00000569899 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
GDE1-205ENST00000569899 CPDO75976 1380 aa13.18□□□□□ -0.3
GDE1-205ENST00000569899 FCHSD2O94868 740 aa13.17□□□□□ -0.3
GDE1-205ENST00000569899 KDRP35968 1356 aa13.17□□□□□ -0.3
GDE1-205ENST00000569899 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
GDE1-205ENST00000569899 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
GDE1-205ENST00000569899 EYA1Q99502 592 aa13.17□□□□□ -0.3
GDE1-205ENST00000569899 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
GDE1-205ENST00000569899 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
GDE1-205ENST00000569899 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
GDE1-205ENST00000569899 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.3
GDE1-205ENST00000569899 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
GDE1-205ENST00000569899 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
GDE1-205ENST00000569899 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
GDE1-205ENST00000569899 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
GDE1-205ENST00000569899 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
GDE1-205ENST00000569899 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
GDE1-205ENST00000569899 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
GDE1-205ENST00000569899 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
GDE1-205ENST00000569899 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
GDE1-205ENST00000569899 ERBB3P21860 1342 aa13.14□□□□□ -0.31
GDE1-205ENST00000569899 TMPOP42166 694 aaKnown RBP13.13□□□□□ -0.31
GDE1-205ENST00000569899 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
GDE1-205ENST00000569899 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
GDE1-205ENST00000569899 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
GDE1-205ENST00000569899 COL5A2P05997 1499 aaPredicted RBP13.12□□□□□ -0.31
GDE1-205ENST00000569899 NEFMP07197 916 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 OSBPP22059 807 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
GDE1-205ENST00000569899 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
GDE1-205ENST00000569899 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
GDE1-205ENST00000569899 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
GDE1-205ENST00000569899 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
GDE1-205ENST00000569899 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
GDE1-205ENST00000569899 PHF14O94880 888 aa13.1□□□□□ -0.31
GDE1-205ENST00000569899 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
GDE1-205ENST00000569899 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
GDE1-205ENST00000569899 RIPK4P57078 832 aa13.1□□□□□ -0.31
GDE1-205ENST00000569899 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
GDE1-205ENST00000569899 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
GDE1-205ENST00000569899 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
GDE1-205ENST00000569899 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
GDE1-205ENST00000569899 MEGF6O75095 1541 aa13.07□□□□□ -0.32
GDE1-205ENST00000569899 ST18O60284 1047 aa13.07□□□□□ -0.32
GDE1-205ENST00000569899 FOSBP53539 338 aa13.07□□□□□ -0.32
GDE1-205ENST00000569899 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms