RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
THUMPD1-204ENST00000569768 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
THUMPD1-204ENST00000569768 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
THUMPD1-204ENST00000569768 RCAN3Q9UKA8 241 aa19.1■□□□□ 0.65
THUMPD1-204ENST00000569768 TOGARAM1Q9Y4F4 1720 aa19.09■□□□□ 0.65
THUMPD1-204ENST00000569768 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
THUMPD1-204ENST00000569768 BTBD11A6QL63 1104 aa19.08■□□□□ 0.64
THUMPD1-204ENST00000569768 HOXB7P09629 217 aa19.07■□□□□ 0.64
THUMPD1-204ENST00000569768 CABP4P57796 275 aa19.07■□□□□ 0.64
THUMPD1-204ENST00000569768 RBM6P78332 1123 aaKnown RBP19.07■□□□□ 0.64
THUMPD1-204ENST00000569768 PAPPAQ13219 1627 aa19.07■□□□□ 0.64
THUMPD1-204ENST00000569768 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
THUMPD1-204ENST00000569768 MARCH10Q8NA82 808 aaPredicted RBP19.06■□□□□ 0.64
THUMPD1-204ENST00000569768 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
THUMPD1-204ENST00000569768 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
THUMPD1-204ENST00000569768 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
THUMPD1-204ENST00000569768 VAMP4O75379 141 aa19.04■□□□□ 0.64
THUMPD1-204ENST00000569768 EIF4A1P60842 406 aaKnown RBP19.04■□□□□ 0.64
THUMPD1-204ENST00000569768 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
THUMPD1-204ENST00000569768 DOT1LQ8TEK3 1739 aa19.03■□□□□ 0.64
THUMPD1-204ENST00000569768 RARSP54136 660 aaKnown RBP19.03■□□□□ 0.64
THUMPD1-204ENST00000569768 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
THUMPD1-204ENST00000569768 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
THUMPD1-204ENST00000569768 MIS18AQ9NYP9 233 aa19.03■□□□□ 0.64
THUMPD1-204ENST00000569768 ITGB4P16144 1822 aa19.02■□□□□ 0.64
THUMPD1-204ENST00000569768 UBR2Q8IWV8 1755 aa19.02■□□□□ 0.64
THUMPD1-204ENST00000569768 SEPT12Q8IYM1 358 aa19.02■□□□□ 0.64
THUMPD1-204ENST00000569768 C8orf58Q8NAV2 365 aa19.02■□□□□ 0.64
THUMPD1-204ENST00000569768 TMOD3Q9NYL9 352 aa19.02■□□□□ 0.64
THUMPD1-204ENST00000569768 TSPYL6Q8N831 410 aa19.01■□□□□ 0.63
THUMPD1-204ENST00000569768 TTC5Q8N0Z6 440 aa19■□□□□ 0.63
THUMPD1-204ENST00000569768 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
THUMPD1-204ENST00000569768 A0A0G2JS52 829 aa18.99■□□□□ 0.63
THUMPD1-204ENST00000569768 MYT1Q01538 1121 aa18.99■□□□□ 0.63
THUMPD1-204ENST00000569768 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
THUMPD1-204ENST00000569768 RGS17Q9UGC6 210 aaPredicted RBP18.99■□□□□ 0.63
THUMPD1-204ENST00000569768 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
THUMPD1-204ENST00000569768 PIGBQ92521 554 aa18.98■□□□□ 0.63
THUMPD1-204ENST00000569768 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
THUMPD1-204ENST00000569768 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
THUMPD1-204ENST00000569768 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
THUMPD1-204ENST00000569768 KCNQ3O43525 872 aa18.97■□□□□ 0.63
THUMPD1-204ENST00000569768 GIGYF1O75420 1035 aaPredicted RBP18.97■□□□□ 0.63
THUMPD1-204ENST00000569768 RXRBP28702 533 aa18.97■□□□□ 0.63
THUMPD1-204ENST00000569768 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
THUMPD1-204ENST00000569768 KRT24Q2M2I5 525 aa18.96■□□□□ 0.63
THUMPD1-204ENST00000569768 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
THUMPD1-204ENST00000569768 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
THUMPD1-204ENST00000569768 CICQ96RK0 1608 aaPredicted RBP18.96■□□□□ 0.63
THUMPD1-204ENST00000569768 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
THUMPD1-204ENST00000569768 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
THUMPD1-204ENST00000569768 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
THUMPD1-204ENST00000569768 CACNA1FO60840 1977 aa18.95■□□□□ 0.62
THUMPD1-204ENST00000569768 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 ELL2O00472 640 aaPredicted RBP18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 KRT27Q7Z3Y8 459 aa18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
THUMPD1-204ENST00000569768 BRWD3Q6RI45 1802 aa18.93■□□□□ 0.62
THUMPD1-204ENST00000569768 BCAR3O75815 825 aa18.93■□□□□ 0.62
THUMPD1-204ENST00000569768 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
THUMPD1-204ENST00000569768 ARHGAP45Q92619 1136 aa18.93■□□□□ 0.62
THUMPD1-204ENST00000569768 ATG3Q9NT62 314 aa18.93■□□□□ 0.62
THUMPD1-204ENST00000569768 RGS12O14924 1447 aa18.92■□□□□ 0.62
THUMPD1-204ENST00000569768 ZNF831Q5JPB2 1677 aa18.92■□□□□ 0.62
THUMPD1-204ENST00000569768 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
THUMPD1-204ENST00000569768 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
THUMPD1-204ENST00000569768 ERBB4Q15303 1308 aa18.92■□□□□ 0.62
THUMPD1-204ENST00000569768 SBF2Q86WG5 1849 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 NEFLP07196 543 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 STK31Q9BXU1 1019 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 TEX13AQ9BXU3 409 aaPredicted RBP18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 C5P01031 1676 aa18.91■□□□□ 0.62
THUMPD1-204ENST00000569768 MS4A1P11836 297 aa18.9■□□□□ 0.62
THUMPD1-204ENST00000569768 PDE3AQ14432 1141 aa18.9■□□□□ 0.62
THUMPD1-204ENST00000569768 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
THUMPD1-204ENST00000569768 ASAP1Q9ULH1 1129 aa18.9■□□□□ 0.62
THUMPD1-204ENST00000569768 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
THUMPD1-204ENST00000569768 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
THUMPD1-204ENST00000569768 ACSBG1Q96GR2 724 aa18.89■□□□□ 0.61
THUMPD1-204ENST00000569768 BCL2L13Q9BXK5 485 aa18.88■□□□□ 0.61
THUMPD1-204ENST00000569768 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
THUMPD1-204ENST00000569768 PTPRCP08575 1304 aa18.88■□□□□ 0.61
THUMPD1-204ENST00000569768 BCL11BQ9C0K0 894 aaPredicted RBP18.87■□□□□ 0.61
THUMPD1-204ENST00000569768 BTAF1O14981 1849 aa18.86■□□□□ 0.61
THUMPD1-204ENST00000569768 PALLDQ8WX93 1383 aa18.86■□□□□ 0.61
THUMPD1-204ENST00000569768 KCNQ2O43526 872 aa18.86■□□□□ 0.61
THUMPD1-204ENST00000569768 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
THUMPD1-204ENST00000569768 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 API5Q9BZZ5 524 aaKnown RBP18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 DDX21Q9NR30 783 aaKnown RBP eCLIP18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
THUMPD1-204ENST00000569768 TJP1Q07157 1748 aa18.84■□□□□ 0.61
THUMPD1-204ENST00000569768 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms