RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
CNEP1R1-211ENST00000569647 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
CNEP1R1-211ENST00000569647 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
CNEP1R1-211ENST00000569647 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
CNEP1R1-211ENST00000569647 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
CNEP1R1-211ENST00000569647 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
CNEP1R1-211ENST00000569647 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
CNEP1R1-211ENST00000569647 UBR3Q6ZT12 1888 aa17.09■□□□□ 0.33
CNEP1R1-211ENST00000569647 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.33
CNEP1R1-211ENST00000569647 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.33
CNEP1R1-211ENST00000569647 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
CNEP1R1-211ENST00000569647 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
CNEP1R1-211ENST00000569647 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
CNEP1R1-211ENST00000569647 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
CNEP1R1-211ENST00000569647 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-211ENST00000569647 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
CNEP1R1-211ENST00000569647 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
CNEP1R1-211ENST00000569647 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
CNEP1R1-211ENST00000569647 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
CNEP1R1-211ENST00000569647 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
CNEP1R1-211ENST00000569647 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
CNEP1R1-211ENST00000569647 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
CNEP1R1-211ENST00000569647 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
CNEP1R1-211ENST00000569647 GAS2L2Q8NHY3 880 aa17.04■□□□□ 0.32
CNEP1R1-211ENST00000569647 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
CNEP1R1-211ENST00000569647 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
CNEP1R1-211ENST00000569647 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
CNEP1R1-211ENST00000569647 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
CNEP1R1-211ENST00000569647 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
CNEP1R1-211ENST00000569647 SIK1P57059 783 aa17.03■□□□□ 0.32
CNEP1R1-211ENST00000569647 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
CNEP1R1-211ENST00000569647 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 ARXQ96QS3 562 aa17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 FHDC1Q9C0D6 1143 aaPredicted RBP17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
CNEP1R1-211ENST00000569647 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
CNEP1R1-211ENST00000569647 MRC1P22897 1456 aa17.01■□□□□ 0.31
CNEP1R1-211ENST00000569647 NEFMP07197 916 aa17.01■□□□□ 0.31
CNEP1R1-211ENST00000569647 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
CNEP1R1-211ENST00000569647 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
CNEP1R1-211ENST00000569647 MSH5O43196 834 aa17■□□□□ 0.31
CNEP1R1-211ENST00000569647 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
CNEP1R1-211ENST00000569647 AK7Q96M32 723 aa17■□□□□ 0.31
CNEP1R1-211ENST00000569647 SYT17Q9BSW7 474 aa17■□□□□ 0.31
CNEP1R1-211ENST00000569647 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
CNEP1R1-211ENST00000569647 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
CNEP1R1-211ENST00000569647 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
CNEP1R1-211ENST00000569647 POLD1P28340 1107 aa16.99■□□□□ 0.31
CNEP1R1-211ENST00000569647 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
CNEP1R1-211ENST00000569647 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
CNEP1R1-211ENST00000569647 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
CNEP1R1-211ENST00000569647 CABP4P57796 275 aa16.98■□□□□ 0.31
CNEP1R1-211ENST00000569647 ITPK1Q13572 414 aa16.98■□□□□ 0.31
CNEP1R1-211ENST00000569647 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
CNEP1R1-211ENST00000569647 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
CNEP1R1-211ENST00000569647 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
CNEP1R1-211ENST00000569647 CHD4Q14839 1912 aa16.96■□□□□ 0.31
CNEP1R1-211ENST00000569647 APAF1O14727 1248 aa16.96■□□□□ 0.31
CNEP1R1-211ENST00000569647 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
CNEP1R1-211ENST00000569647 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
CNEP1R1-211ENST00000569647 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
CNEP1R1-211ENST00000569647 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 TJP1Q07157 1748 aa16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 CICQ96RK0 1608 aaPredicted RBP16.95■□□□□ 0.3
CNEP1R1-211ENST00000569647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.94■□□□□ 0.3
CNEP1R1-211ENST00000569647 PHF14O94880 888 aa16.94■□□□□ 0.3
CNEP1R1-211ENST00000569647 SSFA2P28290 1259 aa16.94■□□□□ 0.3
CNEP1R1-211ENST00000569647 RIPK4P57078 832 aa16.94■□□□□ 0.3
CNEP1R1-211ENST00000569647 GNPATO15228 680 aa16.93■□□□□ 0.3
CNEP1R1-211ENST00000569647 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
CNEP1R1-211ENST00000569647 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
CNEP1R1-211ENST00000569647 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 MCM10Q7L590 875 aa16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
CNEP1R1-211ENST00000569647 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
CNEP1R1-211ENST00000569647 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
CNEP1R1-211ENST00000569647 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
CNEP1R1-211ENST00000569647 UBR2Q8IWV8 1755 aa16.91■□□□□ 0.3
CNEP1R1-211ENST00000569647 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.3
CNEP1R1-211ENST00000569647 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
CNEP1R1-211ENST00000569647 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
CNEP1R1-211ENST00000569647 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
CNEP1R1-211ENST00000569647 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
CNEP1R1-211ENST00000569647 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
CNEP1R1-211ENST00000569647 YY1P25490 414 aa16.88■□□□□ 0.29
CNEP1R1-211ENST00000569647 TEFQ10587 303 aa16.88■□□□□ 0.29
CNEP1R1-211ENST00000569647 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
CNEP1R1-211ENST00000569647 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
CNEP1R1-211ENST00000569647 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms