RNA–Protein interactions for RNA: ENST00000569595.5

NUP93-219, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-219ENST00000569595 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
NUP93-219ENST00000569595 ARXQ96QS3 562 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
NUP93-219ENST00000569595 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
NUP93-219ENST00000569595 MRC1P22897 1456 aa11.85□□□□□ -0.51
NUP93-219ENST00000569595 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
NUP93-219ENST00000569595 CABP4P57796 275 aa11.85□□□□□ -0.51
NUP93-219ENST00000569595 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
NUP93-219ENST00000569595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
NUP93-219ENST00000569595 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
NUP93-219ENST00000569595 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
NUP93-219ENST00000569595 FLAD1Q8NFF5 587 aa11.83□□□□□ -0.52
NUP93-219ENST00000569595 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
NUP93-219ENST00000569595 AK7Q96M32 723 aa11.83□□□□□ -0.52
NUP93-219ENST00000569595 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
NUP93-219ENST00000569595 SLC52A2Q9HAB3 445 aa11.83□□□□□ -0.52
NUP93-219ENST00000569595 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
NUP93-219ENST00000569595 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
NUP93-219ENST00000569595 MSH5O43196 834 aa11.82□□□□□ -0.52
NUP93-219ENST00000569595 SSFA2P28290 1259 aa11.82□□□□□ -0.52
NUP93-219ENST00000569595 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
NUP93-219ENST00000569595 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
NUP93-219ENST00000569595 TJP1Q07157 1748 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 GNPATO15228 680 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
NUP93-219ENST00000569595 POLD1P28340 1107 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
NUP93-219ENST00000569595 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
NUP93-219ENST00000569595 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
NUP93-219ENST00000569595 PHF14O94880 888 aa11.8□□□□□ -0.52
NUP93-219ENST00000569595 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
NUP93-219ENST00000569595 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
NUP93-219ENST00000569595 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
NUP93-219ENST00000569595 PRKAR2BP31323 418 aa11.79□□□□□ -0.52
NUP93-219ENST00000569595 SLC39A6Q13433 755 aa11.79□□□□□ -0.52
NUP93-219ENST00000569595 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
NUP93-219ENST00000569595 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
NUP93-219ENST00000569595 FCHSD2O94868 740 aa11.78□□□□□ -0.52
NUP93-219ENST00000569595 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
NUP93-219ENST00000569595 GAS2L2Q8NHY3 880 aa11.78□□□□□ -0.52
NUP93-219ENST00000569595 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
NUP93-219ENST00000569595 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
NUP93-219ENST00000569595 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NUP93-219ENST00000569595 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
NUP93-219ENST00000569595 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
NUP93-219ENST00000569595 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
NUP93-219ENST00000569595 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
NUP93-219ENST00000569595 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
NUP93-219ENST00000569595 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
NUP93-219ENST00000569595 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
NUP93-219ENST00000569595 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
NUP93-219ENST00000569595 ADRA2BP18089 450 aa11.76□□□□□ -0.53
NUP93-219ENST00000569595 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
NUP93-219ENST00000569595 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
NUP93-219ENST00000569595 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
NUP93-219ENST00000569595 GYS1P13807 737 aa11.75□□□□□ -0.53
NUP93-219ENST00000569595 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
NUP93-219ENST00000569595 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
NUP93-219ENST00000569595 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
NUP93-219ENST00000569595 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
NUP93-219ENST00000569595 KCNQ3O43525 872 aa11.73□□□□□ -0.53
NUP93-219ENST00000569595 MMP10P09238 476 aa11.73□□□□□ -0.53
NUP93-219ENST00000569595 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
NUP93-219ENST00000569595 SOS1Q07889 1333 aaPredicted RBP11.73□□□□□ -0.53
NUP93-219ENST00000569595 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
NUP93-219ENST00000569595 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
NUP93-219ENST00000569595 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
NUP93-219ENST00000569595 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
NUP93-219ENST00000569595 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 YY1P25490 414 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 RFC4P35249 363 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 TEFQ10587 303 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 RALBP1Q15311 655 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 MCM10Q7L590 875 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 NLGN1Q8N2Q7 840 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
NUP93-219ENST00000569595 ZBTB1Q9Y2K1 713 aa11.72□□□□□ -0.53
NUP93-219ENST00000569595 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
NUP93-219ENST00000569595 FKBP8Q14318 412 aa11.71□□□□□ -0.53
NUP93-219ENST00000569595 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
NUP93-219ENST00000569595 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
NUP93-219ENST00000569595 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
NUP93-219ENST00000569595 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
NUP93-219ENST00000569595 DDR1Q08345 913 aa11.7□□□□□ -0.54
NUP93-219ENST00000569595 GPR162Q16538 588 aa11.7□□□□□ -0.54
NUP93-219ENST00000569595 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
NUP93-219ENST00000569595 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
NUP93-219ENST00000569595 TM4SF1P30408 202 aa11.69□□□□□ -0.54
NUP93-219ENST00000569595 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms