RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 SCN11AQ9UI33 1791 aa9.76□□□□□ -0.85
LINC00559-201ENST00000569476 ARHGEF25Q86VW2 580 aa9.76□□□□□ -0.85
LINC00559-201ENST00000569476 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 RABEP1Q15276 862 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 ATP8B2P98198 1209 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 SENP3Q9H4L4 574 aaPredicted RBP9.75□□□□□ -0.85
LINC00559-201ENST00000569476 DDIT3P35638 169 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 NBR1Q14596 966 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 HSP90AB4PQ58FF6 505 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 LNPKQ9C0E8 428 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 STAP2Q9UGK3 403 aa9.75□□□□□ -0.85
LINC00559-201ENST00000569476 LAMB4A4D0S4 1761 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 DCTN1Q14203 1278 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 GSE1Q14687 1217 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 DDX11L8A8MPP1 907 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 FLIIQ13045 1269 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 CPDO75976 1380 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 C19orf44Q9H6X5 657 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 COL15A1P39059 1388 aa9.74□□□□□ -0.85
LINC00559-201ENST00000569476 REC8O95072 547 aa9.73□□□□□ -0.85
LINC00559-201ENST00000569476 SALL3Q9BXA9 1300 aa9.73□□□□□ -0.85
LINC00559-201ENST00000569476 IL17REQ8NFR9 667 aa9.73□□□□□ -0.85
LINC00559-201ENST00000569476 RGPD2P0DJD1 1756 aa9.73□□□□□ -0.85
LINC00559-201ENST00000569476 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
LINC00559-201ENST00000569476 MFAP1P55081 439 aaKnown RBP9.73□□□□□ -0.85
LINC00559-201ENST00000569476 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
LINC00559-201ENST00000569476 TNS3Q68CZ2 1445 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 MCM2P49736 904 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 TICAM2Q86XR7 235 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 ANAPC15P60006 121 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 EIF4A1P60842 406 aaKnown RBP9.72□□□□□ -0.85
LINC00559-201ENST00000569476 MTX1Q13505 466 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 POLA2Q14181 598 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 L1TD1Q5T7N2 865 aaKnown RBP9.72□□□□□ -0.85
LINC00559-201ENST00000569476 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
LINC00559-201ENST00000569476 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.85
LINC00559-201ENST00000569476 SSH3Q8TE77 659 aa9.71□□□□□ -0.86
LINC00559-201ENST00000569476 CWC22Q9HCG8 908 aaKnown RBP9.71□□□□□ -0.86
LINC00559-201ENST00000569476 PAPPAQ13219 1627 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 PXDNQ92626 1479 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 RNMTO43148 476 aaKnown RBP9.7□□□□□ -0.86
LINC00559-201ENST00000569476 ESCO1Q5FWF5 840 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 K7ELQ4 463 aaPredicted RBP9.7□□□□□ -0.86
LINC00559-201ENST00000569476 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
LINC00559-201ENST00000569476 HSP90AB1P08238 724 aaKnown RBP9.7□□□□□ -0.86
LINC00559-201ENST00000569476 C1orf141Q5JVX7 400 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 UTYO14607 1347 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 GCP02774 474 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 MEIS3Q99687 375 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 LRRCC1Q9C099 1032 aa9.7□□□□□ -0.86
LINC00559-201ENST00000569476 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
LINC00559-201ENST00000569476 STRCP1A6NGW2 1772 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 FOXO3O43524 673 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 HDGFL1Q5TGJ6 251 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 HYPKQ9NX55 129 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 NUTM2FA1L443 756 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 ERC2O15083 957 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 MCCP23508 829 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
LINC00559-201ENST00000569476 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
LINC00559-201ENST00000569476 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 FKBP5Q13451 457 aaPredicted RBP9.68□□□□□ -0.86
LINC00559-201ENST00000569476 KIF2CQ99661 725 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 TTC41PQ6P2S7 1318 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 UBTFL1P0CB47 393 aaPredicted RBP9.68□□□□□ -0.86
LINC00559-201ENST00000569476 PDE1AP54750 535 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 TEFQ10587 303 aa9.68□□□□□ -0.86
LINC00559-201ENST00000569476 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
LINC00559-201ENST00000569476 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
LINC00559-201ENST00000569476 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 SPG7Q9UQ90 795 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 UBR2Q8IWV8 1755 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 ST18O60284 1047 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 DDX58O95786 925 aaKnown RBP9.67□□□□□ -0.86
LINC00559-201ENST00000569476 MCM4P33991 863 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 NUCB2P80303 420 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 G2E3Q7L622 706 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 DNAAF4Q8WXU2 420 aa9.67□□□□□ -0.86
LINC00559-201ENST00000569476 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
LINC00559-201ENST00000569476 ERBB3P21860 1342 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 RFX7Q2KHR2 1363 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 RGPD5Q99666 1765 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 SDSP20132 328 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
LINC00559-201ENST00000569476 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms