RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 MRPL50Q8N5N7 158 aaKnown RBP7.22□□□□□ -1.25
CDH13-213ENST00000569454 KCNH5Q8NCM2 988 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 GCC1Q96CN9 775 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 PODXL2Q9NZ53 605 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 USP35Q9P2H5 1018 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 PHF8Q9UPP1 1060 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 LAS1LQ9Y4W2 734 aaKnown RBP7.22□□□□□ -1.25
CDH13-213ENST00000569454 PLEKHG2Q9H7P9 1386 aa7.21□□□□□ -1.25
CDH13-213ENST00000569454 MARF1Q9Y4F3 1742 aaKnown RBP7.21□□□□□ -1.25
CDH13-213ENST00000569454 DCCP43146 1447 aa7.21□□□□□ -1.25
CDH13-213ENST00000569454 MST1RQ04912 1400 aa7.21□□□□□ -1.25
CDH13-213ENST00000569454 NCOA3Q9Y6Q9 1424 aa7.21□□□□□ -1.25
CDH13-213ENST00000569454 FBLN1P23142 703 aa7.21□□□□□ -1.26
CDH13-213ENST00000569454 HSP90AB2PQ58FF8 381 aa7.21□□□□□ -1.26
CDH13-213ENST00000569454 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.26
CDH13-213ENST00000569454 PDZRN3Q9UPQ7 1066 aa7.21□□□□□ -1.26
CDH13-213ENST00000569454 NFAT5O94916 1531 aa7.21□□□□□ -1.26
CDH13-213ENST00000569454 RGPD8O14715 1765 aaPredicted RBP7.2□□□□□ -1.26
CDH13-213ENST00000569454 OVOS2A0A0G2JMS6 1433 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 CRB1P82279 1406 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 NUTM2FA1L443 756 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 HOXC9P31274 260 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 BECN1Q14457 450 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 AEBP1Q8IUX7 1158 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 SLIT3O75094 1523 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 MAP3K5Q99683 1374 aa7.2□□□□□ -1.26
CDH13-213ENST00000569454 NCAPD2Q15021 1401 aa7.19□□□□□ -1.26
CDH13-213ENST00000569454 ABCC6O95255 1503 aa7.19□□□□□ -1.26
CDH13-213ENST00000569454 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
CDH13-213ENST00000569454 TPRNQ4KMQ1 711 aa7.19□□□□□ -1.26
CDH13-213ENST00000569454 INTS3Q68E01 1043 aaKnown RBP7.19□□□□□ -1.26
CDH13-213ENST00000569454 ABTB2Q8N961 1025 aa7.19□□□□□ -1.26
CDH13-213ENST00000569454 THUMPD2Q9BTF0 503 aaKnown RBP7.19□□□□□ -1.26
CDH13-213ENST00000569454 TNNQ9UQP3 1299 aa7.19□□□□□ -1.26
CDH13-213ENST00000569454 PXDNLA1KZ92 1463 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 ZBTB7BO15156 539 aaPredicted RBP7.18□□□□□ -1.26
CDH13-213ENST00000569454 RXRBP28702 533 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 NUCB1Q02818 461 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 IP6K1Q92551 441 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 EYA1Q99502 592 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 LTN1O94822 1766 aa7.18□□□□□ -1.26
CDH13-213ENST00000569454 CAMTA1Q9Y6Y1 1673 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 FAM83GA6ND36 823 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 HOXB7P09629 217 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 CCT4P50991 539 aaKnown RBP7.17□□□□□ -1.26
CDH13-213ENST00000569454 PSME1Q06323 249 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 BMP2KLQ5H9B9 411 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 CHD1LQ86WJ1 897 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 CDAN1Q8IWY9 1227 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 RPAP2Q8IXW5 612 aaPredicted RBP7.17□□□□□ -1.26
CDH13-213ENST00000569454 TSPYL6Q8N831 410 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 C8orf58Q8NAV2 365 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 STK31Q9BXU1 1019 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 TSPYL4Q9UJ04 414 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 USP19O94966 1318 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 MSH6P52701 1360 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 RGS12O14924 1447 aa7.17□□□□□ -1.26
CDH13-213ENST00000569454 FAM208AQ9UK61 1670 aaKnown RBP7.16□□□□□ -1.26
CDH13-213ENST00000569454 N4BP2Q86UW6 1770 aaPredicted RBP7.16□□□□□ -1.26
CDH13-213ENST00000569454 HMMRO75330 724 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 MTHFSDQ2M296 383 aaKnown RBP7.16□□□□□ -1.26
CDH13-213ENST00000569454 CCDC30Q5VVM6 783 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 MCM10Q7L590 875 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 SKAP1Q86WV1 359 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 MS4A3Q96HJ5 214 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 TBC1D32Q96NH3 1257 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 NHSL1Q5SYE7 1610 aa7.16□□□□□ -1.26
CDH13-213ENST00000569454 CACNA1FO60840 1977 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 SOX12O15370 315 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 DCTN1Q14203 1278 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 ESCO1Q5FWF5 840 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 C19orf44Q9H6X5 657 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 CEMIPQ8WUJ3 1361 aa7.15□□□□□ -1.26
CDH13-213ENST00000569454 ATP10DQ9P241 1426 aa7.15□□□□□ -1.27
CDH13-213ENST00000569454 C1orf167Q5SNV9 1468 aa7.15□□□□□ -1.27
CDH13-213ENST00000569454 LMO7Q8WWI1 1683 aa7.15□□□□□ -1.27
CDH13-213ENST00000569454 TRPM3Q9HCF6 1732 aaPredicted RBP7.15□□□□□ -1.27
CDH13-213ENST00000569454 UTRNP46939 3433 aa7.14□□□□□ -1.27
CDH13-213ENST00000569454 NUTM2BA6NNL0 878 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 NUTM2EB1AL46 878 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 ELL2O00472 640 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 TNS2Q63HR2 1409 aa7.14□□□□□ -1.27
CDH13-213ENST00000569454 ZNF772Q68DY9 489 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 NUTM2AQ8IVF1 878 aaPredicted RBP7.14□□□□□ -1.27
CDH13-213ENST00000569454 ANKRD44Q8N8A2 993 aa7.14□□□□□ -1.27
CDH13-213ENST00000569454 GNAI3P08754 354 aa7.13□□□□□ -1.27
CDH13-213ENST00000569454 MNX1P50219 401 aaPredicted RBP7.13□□□□□ -1.27
CDH13-213ENST00000569454 PLEKHO1Q53GL0 409 aaPredicted RBP7.13□□□□□ -1.27
CDH13-213ENST00000569454 ARHGEF25Q86VW2 580 aa7.13□□□□□ -1.27
CDH13-213ENST00000569454 DCTPP1Q9H773 170 aa7.13□□□□□ -1.27
CDH13-213ENST00000569454 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 GCP02774 474 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 AKAP4Q5JQC9 854 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 ANKRD45Q5TZF3 282 aa7.12□□□□□ -1.27
CDH13-213ENST00000569454 PROSER2Q86WR7 435 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms