RNA–Protein interactions for RNA: ENST00000569388.5

NAE1-221, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-221ENST00000569388 SIPA1L3O60292 1781 aaPredicted RBP28.21■■■□□ 2.11
NAE1-221ENST00000569388 GNAT3A8MTJ3 354 aa28.2■■■□□ 2.1
NAE1-221ENST00000569388 SLC15A2Q16348 729 aa28.2■■■□□ 2.1
NAE1-221ENST00000569388 SLC52A2Q9HAB3 445 aa28.19■■■□□ 2.1
NAE1-221ENST00000569388 C4BP0C0L5 1744 aa28.18■■■□□ 2.1
NAE1-221ENST00000569388 PLEKHF1Q96S99 279 aa28.18■■■□□ 2.1
NAE1-221ENST00000569388 QSER1Q2KHR3 1735 aa28.18■■■□□ 2.1
NAE1-221ENST00000569388 PDGFDQ9GZP0 370 aaPredicted RBP28.17■■■□□ 2.1
NAE1-221ENST00000569388 SRCAPQ6ZRS2 3230 aa28.17■■■□□ 2.1
NAE1-221ENST00000569388 LOC102724428A0A0B4J2F2 783 aa28.16■■■□□ 2.1
NAE1-221ENST00000569388 ANP32CO43423 234 aa28.16■■■□□ 2.1
NAE1-221ENST00000569388 SIK1P57059 783 aa28.16■■■□□ 2.1
NAE1-221ENST00000569388 IL17REQ8NFR9 667 aa28.16■■■□□ 2.1
NAE1-221ENST00000569388 AKT1S1Q96B36 256 aa28.16■■■□□ 2.1
NAE1-221ENST00000569388 NEFMP07197 916 aa28.15■■■□□ 2.1
NAE1-221ENST00000569388 WDR43Q15061 677 aaKnown RBP eCLIP28.15■■■□□ 2.1
NAE1-221ENST00000569388 ZNF831Q5JPB2 1677 aa28.14■■■□□ 2.1
NAE1-221ENST00000569388 CCDC184Q52MB2 194 aa28.14■■■□□ 2.1
NAE1-221ENST00000569388 RBM42Q9BTD8 480 aaKnown RBP28.14■■■□□ 2.1
NAE1-221ENST00000569388 COL5A3P25940 1745 aaPredicted RBP28.14■■■□□ 2.1
NAE1-221ENST00000569388 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.09
NAE1-221ENST00000569388 LRP5O75197 1615 aa28.14■■■□□ 2.09
NAE1-221ENST00000569388 TJP1Q07157 1748 aa28.13■■■□□ 2.09
NAE1-221ENST00000569388 UBR2Q8IWV8 1755 aa28.12■■■□□ 2.09
NAE1-221ENST00000569388 ITPK1Q13572 414 aa28.12■■■□□ 2.09
NAE1-221ENST00000569388 CCDC146Q8IYE0 955 aa28.12■■■□□ 2.09
NAE1-221ENST00000569388 PTCD1O75127 700 aaKnown RBP28.11■■■□□ 2.09
NAE1-221ENST00000569388 ATP6V1AP38606 617 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 SLC39A6Q13433 755 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 MCM10Q7L590 875 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 LINC00116Q8NCU8 138 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 SLC4A9Q96Q91 983 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 CEMIPQ8WUJ3 1361 aa28.11■■■□□ 2.09
NAE1-221ENST00000569388 KCPQ6ZWJ8 1503 aa28.1■■■□□ 2.09
NAE1-221ENST00000569388 TEFQ10587 303 aa28.1■■■□□ 2.09
NAE1-221ENST00000569388 DCTN1Q14203 1278 aa28.1■■■□□ 2.09
NAE1-221ENST00000569388 PNNQ9H307 717 aaKnown RBP28.1■■■□□ 2.09
NAE1-221ENST00000569388 UBR3Q6ZT12 1888 aa28.1■■■□□ 2.09
NAE1-221ENST00000569388 RTF1Q92541 710 aaKnown RBP28.09■■■□□ 2.09
NAE1-221ENST00000569388 TFCP2L1Q9NZI6 479 aa28.09■■■□□ 2.09
NAE1-221ENST00000569388 ADAMTS8Q9UP79 889 aa28.09■■■□□ 2.09
NAE1-221ENST00000569388 NFE2L2Q16236 605 aa28.08■■■□□ 2.09
NAE1-221ENST00000569388 CICQ96RK0 1608 aaPredicted RBP28.07■■■□□ 2.08
NAE1-221ENST00000569388 PNPLA7Q6ZV29 1317 aa28.07■■■□□ 2.08
NAE1-221ENST00000569388 ZBTB7AO95365 584 aa28.05■■■□□ 2.08
NAE1-221ENST00000569388 AK7Q96M32 723 aa28.04■■■□□ 2.08
NAE1-221ENST00000569388 SMIM5Q71RC9 77 aa28.03■■■□□ 2.08
NAE1-221ENST00000569388 HTATSF1O43719 755 aaKnown RBP28.02■■■□□ 2.08
NAE1-221ENST00000569388 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
NAE1-221ENST00000569388 THUMPD2Q9BTF0 503 aaKnown RBP28.02■■■□□ 2.08
NAE1-221ENST00000569388 RRP7AQ9Y3A4 280 aaKnown RBP28.02■■■□□ 2.08
NAE1-221ENST00000569388 MYH14Q7Z406 1995 aaKnown RBP28.02■■■□□ 2.08
NAE1-221ENST00000569388 RUNDC1Q96C34 613 aa28.01■■■□□ 2.07
NAE1-221ENST00000569388 MRS2Q9HD23 443 aa28.01■■■□□ 2.07
NAE1-221ENST00000569388 TTC5Q8N0Z6 440 aa28■■■□□ 2.07
NAE1-221ENST00000569388 BTBD11A6QL63 1104 aa27.99■■■□□ 2.07
NAE1-221ENST00000569388 MSH5O43196 834 aa27.99■■■□□ 2.07
NAE1-221ENST00000569388 PHF14O94880 888 aa27.99■■■□□ 2.07
NAE1-221ENST00000569388 TMPOP42166 694 aaKnown RBP27.99■■■□□ 2.07
NAE1-221ENST00000569388 RIPK4P57078 832 aa27.99■■■□□ 2.07
NAE1-221ENST00000569388 ATF5Q9Y2D1 282 aaPredicted RBP27.99■■■□□ 2.07
NAE1-221ENST00000569388 GNPATO15228 680 aa27.98■■■□□ 2.07
NAE1-221ENST00000569388 NEUROD2Q15784 382 aa27.98■■■□□ 2.07
NAE1-221ENST00000569388 ZNF790Q6PG37 636 aa27.98■■■□□ 2.07
NAE1-221ENST00000569388 COL23A1Q86Y22 540 aaPredicted RBP27.98■■■□□ 2.07
NAE1-221ENST00000569388 KDM3BQ7LBC6 1761 aa27.98■■■□□ 2.07
NAE1-221ENST00000569388 KCNQ3O43525 872 aa27.97■■■□□ 2.07
NAE1-221ENST00000569388 HMGB2P26583 209 aaKnown RBP27.97■■■□□ 2.07
NAE1-221ENST00000569388 DNAJC10Q8IXB1 793 aa27.97■■■□□ 2.07
NAE1-221ENST00000569388 SPON1Q9HCB6 807 aa27.97■■■□□ 2.07
NAE1-221ENST00000569388 ZNF496Q96IT1 587 aaPredicted RBP27.96■■■□□ 2.07
NAE1-221ENST00000569388 MTFR1LQ9H019 292 aa27.95■■■□□ 2.06
NAE1-221ENST00000569388 C4AP0C0L4 1744 aa27.95■■■□□ 2.06
NAE1-221ENST00000569388 CNTNAP4Q9C0A0 1308 aa27.94■■■□□ 2.06
NAE1-221ENST00000569388 COL24A1Q17RW2 1714 aa27.93■■■□□ 2.06
NAE1-221ENST00000569388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.93■■■□□ 2.06
NAE1-221ENST00000569388 CRKLP46109 303 aaKnown RBP27.93■■■□□ 2.06
NAE1-221ENST00000569388 MIS18AQ9NYP9 233 aa27.93■■■□□ 2.06
NAE1-221ENST00000569388 HEG1Q9ULI3 1381 aa27.92■■■□□ 2.06
NAE1-221ENST00000569388 PNISRQ8TF01 805 aaKnown RBP27.92■■■□□ 2.06
NAE1-221ENST00000569388 TAF7Q15545 349 aaPredicted RBP27.91■■■□□ 2.06
NAE1-221ENST00000569388 SSFA2P28290 1259 aa27.9■■■□□ 2.06
NAE1-221ENST00000569388 PTGER2P43116 358 aa27.9■■■□□ 2.06
NAE1-221ENST00000569388 RC3H1Q5TC82 1133 aaKnown RBP27.9■■■□□ 2.06
NAE1-221ENST00000569388 FMNL2Q96PY5 1086 aa27.9■■■□□ 2.06
NAE1-221ENST00000569388 SENP3-EIF4A1A0A087X0R7 540 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 APAF1O14727 1248 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 LMOD3Q0VAK6 560 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 MSL1Q68DK7 614 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 VSIG10Q8N0Z9 540 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 FLAD1Q8NFF5 587 aa27.89■■■□□ 2.06
NAE1-221ENST00000569388 RTCBQ9Y3I0 505 aaKnown RBP27.89■■■□□ 2.06
NAE1-221ENST00000569388 CYP19A1P11511 503 aaPredicted RBP27.88■■■□□ 2.05
NAE1-221ENST00000569388 SLC16A10Q8TF71 515 aa27.88■■■□□ 2.05
NAE1-221ENST00000569388 TRIM35Q9UPQ4 493 aa27.88■■■□□ 2.05
NAE1-221ENST00000569388 INTS5Q6P9B9 1019 aaKnown RBP27.87■■■□□ 2.05
NAE1-221ENST00000569388 CCDC87Q9NVE4 849 aa27.87■■■□□ 2.05
NAE1-221ENST00000569388 LAMB4A4D0S4 1761 aa27.86■■■□□ 2.05
NAE1-221ENST00000569388 PPP1R1BQ9UD71 204 aaPredicted RBP27.86■■■□□ 2.05
NAE1-221ENST00000569388 RPS6KA4O75676 772 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms