RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 UBR1Q8IWV7 1749 aa11.83□□□□□ -0.52
CCDC113-205ENST00000569374 CTHP32929 405 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 MCCD1P59942 119 aaPredicted RBP11.82□□□□□ -0.52
CCDC113-205ENST00000569374 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.52
CCDC113-205ENST00000569374 WNT2BQ93097 391 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 THAP11Q96EK4 314 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 VRTNQ9H8Y1 702 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 GPSM3Q9Y4H4 160 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 SPATA31D1Q6ZQQ2 1576 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
CCDC113-205ENST00000569374 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
CCDC113-205ENST00000569374 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
CCDC113-205ENST00000569374 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
CCDC113-205ENST00000569374 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 BCAMP50895 628 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
CCDC113-205ENST00000569374 PIK3C2BO00750 1634 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 PLA2R1Q13018 1463 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 PTK2Q05397 1052 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 PPARGC1BQ86YN6 1023 aaKnown RBP11.79□□□□□ -0.52
CCDC113-205ENST00000569374 MAP10Q9P2G4 905 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 SYNMO15061 1565 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 TNRQ92752 1358 aa11.79□□□□□ -0.52
CCDC113-205ENST00000569374 PTPRTO14522 1441 aa11.78□□□□□ -0.52
CCDC113-205ENST00000569374 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
CCDC113-205ENST00000569374 FBXO41Q8TF61 875 aa11.78□□□□□ -0.52
CCDC113-205ENST00000569374 FAM163AQ96GL9 167 aaPredicted RBP11.78□□□□□ -0.52
CCDC113-205ENST00000569374 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 PDXDC2PQ6P474 469 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 SPSB2Q99619 263 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.53
CCDC113-205ENST00000569374 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 ERBINQ96RT1 1412 aa11.77□□□□□ -0.53
CCDC113-205ENST00000569374 UGGT1Q9NYU2 1555 aa11.76□□□□□ -0.53
CCDC113-205ENST00000569374 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
CCDC113-205ENST00000569374 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
CCDC113-205ENST00000569374 RRP7BPQ9NSQ0 103 aa11.76□□□□□ -0.53
CCDC113-205ENST00000569374 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
CCDC113-205ENST00000569374 ADGRL2O95490 1459 aa11.76□□□□□ -0.53
CCDC113-205ENST00000569374 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
CCDC113-205ENST00000569374 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 SKIP12755 728 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 PLEKHM2Q8IWE5 1019 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 WASHC2CQ9Y4E1 1318 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
CCDC113-205ENST00000569374 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
CCDC113-205ENST00000569374 KCNH2Q12809 1159 aa11.74□□□□□ -0.53
CCDC113-205ENST00000569374 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
CCDC113-205ENST00000569374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC113-205ENST00000569374 UNC13BO14795 1591 aa11.74□□□□□ -0.53
CCDC113-205ENST00000569374 GCC2Q8IWJ2 1684 aa11.74□□□□□ -0.53
CCDC113-205ENST00000569374 XIRP1Q702N8 1843 aaKnown RBP11.74□□□□□ -0.53
CCDC113-205ENST00000569374 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 USP17L3A6NCW0 530 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 USP17L4A6NCW7 530 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 E9PCH4 1651 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 LZTS3O60299 673 aaPredicted RBP11.73□□□□□ -0.53
CCDC113-205ENST00000569374 MMP16P51512 607 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 USP17L2Q6R6M4 530 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 USP17L1Q7RTZ2 530 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 ALKQ9UM73 1620 aa11.73□□□□□ -0.53
CCDC113-205ENST00000569374 NLRP1Q9C000 1473 aa11.72□□□□□ -0.53
CCDC113-205ENST00000569374 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
CCDC113-205ENST00000569374 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
CCDC113-205ENST00000569374 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
CCDC113-205ENST00000569374 TET3O43151 1660 aa11.71□□□□□ -0.54
CCDC113-205ENST00000569374 LMTK2Q8IWU2 1503 aa11.7□□□□□ -0.54
CCDC113-205ENST00000569374 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
CCDC113-205ENST00000569374 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
CCDC113-205ENST00000569374 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
CCDC113-205ENST00000569374 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
CCDC113-205ENST00000569374 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
CCDC113-205ENST00000569374 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
CCDC113-205ENST00000569374 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
CCDC113-205ENST00000569374 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
CCDC113-205ENST00000569374 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
CCDC113-205ENST00000569374 COPS2P61201 443 aa11.68□□□□□ -0.54
CCDC113-205ENST00000569374 LARP1Q6PKG0 1096 aaKnown RBP11.68□□□□□ -0.54
CCDC113-205ENST00000569374 ARHGAP9Q9BRR9 750 aa11.68□□□□□ -0.54
CCDC113-205ENST00000569374 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
CCDC113-205ENST00000569374 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
CCDC113-205ENST00000569374 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
CCDC113-205ENST00000569374 MAP7D1Q3KQU3 841 aa11.67□□□□□ -0.54
CCDC113-205ENST00000569374 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
CCDC113-205ENST00000569374 IVNS1ABPQ9Y6Y0 642 aa11.67□□□□□ -0.54
CCDC113-205ENST00000569374 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
CCDC113-205ENST00000569374 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
CCDC113-205ENST00000569374 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
CCDC113-205ENST00000569374 MED14O60244 1454 aa11.66□□□□□ -0.54
CCDC113-205ENST00000569374 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms