RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 UGGT1Q9NYU2 1555 aa8.82□□□□□ -1
HERC2-211ENST00000569335 SIGLEC1Q9BZZ2 1709 aa8.81□□□□□ -1
HERC2-211ENST00000569335 NEUROD2Q15784 382 aa8.81□□□□□ -1
HERC2-211ENST00000569335 MSS51Q4VC12 460 aa8.81□□□□□ -1
HERC2-211ENST00000569335 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
HERC2-211ENST00000569335 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
HERC2-211ENST00000569335 ANKLE1Q8NAG6 615 aa8.81□□□□□ -1
HERC2-211ENST00000569335 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
HERC2-211ENST00000569335 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
HERC2-211ENST00000569335 NEXMIFQ5QGS0 1516 aa8.8□□□□□ -1
HERC2-211ENST00000569335 C6orf229H3BNL8 230 aa8.8□□□□□ -1
HERC2-211ENST00000569335 SPTLC1O15269 473 aa8.8□□□□□ -1
HERC2-211ENST00000569335 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
HERC2-211ENST00000569335 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
HERC2-211ENST00000569335 ERVK-7P63135 1459 aa8.8□□□□□ -1
HERC2-211ENST00000569335 MYOM1P52179 1685 aa8.8□□□□□ -1
HERC2-211ENST00000569335 YEATS2Q9ULM3 1422 aa8.8□□□□□ -1
HERC2-211ENST00000569335 KDM5AP29375 1690 aaKnown RBP8.79□□□□□ -1
HERC2-211ENST00000569335 RAPGEF3O95398 923 aa8.79□□□□□ -1
HERC2-211ENST00000569335 NEFLP07196 543 aa8.79□□□□□ -1
HERC2-211ENST00000569335 GJA5P36382 358 aa8.79□□□□□ -1
HERC2-211ENST00000569335 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
HERC2-211ENST00000569335 ADGRF5Q8IZF2 1346 aa8.79□□□□□ -1
HERC2-211ENST00000569335 KIF13AQ9H1H9 1805 aa8.78□□□□□ -1
HERC2-211ENST00000569335 RETREG3Q86VR2 466 aa8.78□□□□□ -1
HERC2-211ENST00000569335 TMC1Q8TDI8 760 aa8.78□□□□□ -1
HERC2-211ENST00000569335 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
HERC2-211ENST00000569335 LIMD1Q9UGP4 676 aa8.78□□□□□ -1
HERC2-211ENST00000569335 ASXL1Q8IXJ9 1541 aa8.78□□□□□ -1
HERC2-211ENST00000569335 BLMP54132 1417 aaPredicted RBP8.78□□□□□ -1
HERC2-211ENST00000569335 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
HERC2-211ENST00000569335 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 PLA2G2CQ5R387 149 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 CYB5RLQ6IPT4 315 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 EMID1Q96A84 441 aaPredicted RBP8.77□□□□□ -1.01
HERC2-211ENST00000569335 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 PANK3Q9H999 370 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 FCF1Q9Y324 198 aaKnown RBP8.77□□□□□ -1.01
HERC2-211ENST00000569335 SPATA31D1Q6ZQQ2 1576 aa8.77□□□□□ -1.01
HERC2-211ENST00000569335 TMEM131LA2VDJ0 1609 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 USP32Q8NFA0 1604 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 ARHGEF40Q8TER5 1519 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 MMP16P51512 607 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 MTMR2Q13614 643 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 LAPTM4AQ15012 233 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
HERC2-211ENST00000569335 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
HERC2-211ENST00000569335 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
HERC2-211ENST00000569335 CFAP70Q5T0N1 1121 aa8.75□□□□□ -1.01
HERC2-211ENST00000569335 GGT6Q6P531 493 aa8.75□□□□□ -1.01
HERC2-211ENST00000569335 NUDCQ9Y266 331 aa8.75□□□□□ -1.01
HERC2-211ENST00000569335 NINLQ9Y2I6 1382 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 SLC19A1P41440 591 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 CLK2P49760 499 aaKnown RBP8.74□□□□□ -1.01
HERC2-211ENST00000569335 QPCTQ16769 361 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 LIAT1Q6ZQX7 453 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 PRR7Q8TB68 274 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
HERC2-211ENST00000569335 CENPJQ9HC77 1338 aaPredicted RBP8.74□□□□□ -1.01
HERC2-211ENST00000569335 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 JUNDP17535 347 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 IL27Q8NEV9 243 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 POLR3GLQ9BT43 218 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 KNSTRNQ9Y448 316 aa8.73□□□□□ -1.01
HERC2-211ENST00000569335 ARHGEF28Q8N1W1 1705 aaKnown RBP8.72□□□□□ -1.01
HERC2-211ENST00000569335 DLC1Q96QB1 1528 aa8.72□□□□□ -1.01
HERC2-211ENST00000569335 IDI1Q13907 227 aa8.72□□□□□ -1.01
HERC2-211ENST00000569335 TUSC1Q2TAM9 212 aa8.72□□□□□ -1.01
HERC2-211ENST00000569335 PRPF38BQ5VTL8 546 aaKnown RBP8.72□□□□□ -1.01
HERC2-211ENST00000569335 NGEFQ8N5V2 710 aa8.72□□□□□ -1.01
HERC2-211ENST00000569335 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
HERC2-211ENST00000569335 CFAP99D6REC4 459 aa8.71□□□□□ -1.02
HERC2-211ENST00000569335 SKIV2LQ15477 1246 aaKnown RBP8.71□□□□□ -1.02
HERC2-211ENST00000569335 SH3D19Q5HYK7 790 aa8.71□□□□□ -1.02
HERC2-211ENST00000569335 CLTCQ00610 1675 aaKnown RBP8.71□□□□□ -1.02
HERC2-211ENST00000569335 NSD2O96028 1365 aa8.71□□□□□ -1.02
HERC2-211ENST00000569335 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 NRG2O14511 850 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 LILRB3O75022 631 aa8.7□□□□□ -1.02
HERC2-211ENST00000569335 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
HERC2-211ENST00000569335 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
HERC2-211ENST00000569335 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 CCDC24Q8N4L8 307 aa8.7□□□□□ -1.02
HERC2-211ENST00000569335 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
HERC2-211ENST00000569335 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
HERC2-211ENST00000569335 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
HERC2-211ENST00000569335 A2ML1A8K2U0 1454 aa8.69□□□□□ -1.02
HERC2-211ENST00000569335 TULP4Q9NRJ4 1543 aa8.69□□□□□ -1.02
HERC2-211ENST00000569335 RPIAP49247 311 aa8.68□□□□□ -1.02
HERC2-211ENST00000569335 RTL5Q5HYW3 569 aaPredicted RBP8.68□□□□□ -1.02
HERC2-211ENST00000569335 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
HERC2-211ENST00000569335 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
HERC2-211ENST00000569335 MED14O60244 1454 aa8.68□□□□□ -1.02
HERC2-211ENST00000569335 PTPRMP28827 1452 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms