RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
CHRFAM7A-206ENST00000569278 TATP17735 454 aaPredicted RBP15.61■□□□□ 0.09
CHRFAM7A-206ENST00000569278 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
CHRFAM7A-206ENST00000569278 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
CHRFAM7A-206ENST00000569278 TMF1P82094 1093 aa15.6■□□□□ 0.09
CHRFAM7A-206ENST00000569278 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
CHRFAM7A-206ENST00000569278 PIGBQ92521 554 aa15.59■□□□□ 0.09
CHRFAM7A-206ENST00000569278 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 KIF13BQ9NQT8 1826 aa15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 KDRP35968 1356 aa15.58■□□□□ 0.08
CHRFAM7A-206ENST00000569278 COL5A3P25940 1745 aaPredicted RBP15.57■□□□□ 0.08
CHRFAM7A-206ENST00000569278 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
CHRFAM7A-206ENST00000569278 CD2APQ9Y5K6 639 aa15.56■□□□□ 0.08
CHRFAM7A-206ENST00000569278 ZNF831Q5JPB2 1677 aa15.56■□□□□ 0.08
CHRFAM7A-206ENST00000569278 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
CHRFAM7A-206ENST00000569278 ITPK1Q13572 414 aa15.55■□□□□ 0.08
CHRFAM7A-206ENST00000569278 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
CHRFAM7A-206ENST00000569278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-206ENST00000569278 EYA1Q99502 592 aa15.54■□□□□ 0.08
CHRFAM7A-206ENST00000569278 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
CHRFAM7A-206ENST00000569278 PHF14O94880 888 aa15.53■□□□□ 0.08
CHRFAM7A-206ENST00000569278 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
CHRFAM7A-206ENST00000569278 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 IGSF1Q8N6C5 1336 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 LOC102724428A0A0B4J2F2 783 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 SIK1P57059 783 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 AK7Q96M32 723 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 POLKQ9UBT6 870 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 WWC3Q9ULE0 1092 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
CHRFAM7A-206ENST00000569278 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.07
CHRFAM7A-206ENST00000569278 KDM6AO15550 1401 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-206ENST00000569278 PHKG2P15735 406 aa15.51■□□□□ 0.07
CHRFAM7A-206ENST00000569278 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
CHRFAM7A-206ENST00000569278 SMARCC1Q92922 1105 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-206ENST00000569278 MYH14Q7Z406 1995 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-206ENST00000569278 SSFA2P28290 1259 aa15.5■□□□□ 0.07
CHRFAM7A-206ENST00000569278 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
CHRFAM7A-206ENST00000569278 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
CHRFAM7A-206ENST00000569278 C10orf71Q711Q0 1435 aa15.5■□□□□ 0.07
CHRFAM7A-206ENST00000569278 TJP1Q07157 1748 aa15.49■□□□□ 0.07
CHRFAM7A-206ENST00000569278 ADAMTS7Q9UKP4 1686 aa15.49■□□□□ 0.07
CHRFAM7A-206ENST00000569278 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
CHRFAM7A-206ENST00000569278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHRFAM7A-206ENST00000569278 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
CHRFAM7A-206ENST00000569278 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
CHRFAM7A-206ENST00000569278 GNPATO15228 680 aa15.47■□□□□ 0.07
CHRFAM7A-206ENST00000569278 TMOD3Q9NYL9 352 aa15.47■□□□□ 0.07
CHRFAM7A-206ENST00000569278 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
CHRFAM7A-206ENST00000569278 KIF3CO14782 793 aa15.44■□□□□ 0.06
CHRFAM7A-206ENST00000569278 MMP10P09238 476 aa15.44■□□□□ 0.06
CHRFAM7A-206ENST00000569278 ATP6V1AP38606 617 aa15.44■□□□□ 0.06
CHRFAM7A-206ENST00000569278 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
CHRFAM7A-206ENST00000569278 ZNF526Q8TF50 670 aaPredicted RBP15.44■□□□□ 0.06
CHRFAM7A-206ENST00000569278 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
CHRFAM7A-206ENST00000569278 SCN11AQ9UI33 1791 aa15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 ARFGEF1Q9Y6D6 1849 aa15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
CHRFAM7A-206ENST00000569278 PCNTO95613 3336 aa15.41■□□□□ 0.06
CHRFAM7A-206ENST00000569278 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
CHRFAM7A-206ENST00000569278 GYS1P13807 737 aa15.4■□□□□ 0.06
CHRFAM7A-206ENST00000569278 HSPA6P17066 643 aa15.4■□□□□ 0.06
CHRFAM7A-206ENST00000569278 VIRMAQ69YN4 1812 aaKnown RBP15.39■□□□□ 0.05
CHRFAM7A-206ENST00000569278 HMGB2P26583 209 aaKnown RBP15.39■□□□□ 0.05
CHRFAM7A-206ENST00000569278 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
CHRFAM7A-206ENST00000569278 MRC1P22897 1456 aa15.39■□□□□ 0.05
CHRFAM7A-206ENST00000569278 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
CHRFAM7A-206ENST00000569278 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
CHRFAM7A-206ENST00000569278 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
CHRFAM7A-206ENST00000569278 KCNA3P22001 575 aa15.37■□□□□ 0.05
CHRFAM7A-206ENST00000569278 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
CHRFAM7A-206ENST00000569278 DCAF5Q96JK2 942 aa15.37■□□□□ 0.05
CHRFAM7A-206ENST00000569278 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
CHRFAM7A-206ENST00000569278 DPEP1P16444 411 aa15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 DDR1Q08345 913 aa15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 PANK3Q9H999 370 aa15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 RTCBQ9Y3I0 505 aaKnown RBP15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 KCPQ6ZWJ8 1503 aa15.36■□□□□ 0.05
CHRFAM7A-206ENST00000569278 NRXN2Q9P2S2 1712 aa15.35■□□□□ 0.05
CHRFAM7A-206ENST00000569278 RPS6KA4O75676 772 aa15.35■□□□□ 0.05
CHRFAM7A-206ENST00000569278 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
CHRFAM7A-206ENST00000569278 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
CHRFAM7A-206ENST00000569278 TGFB2P61812 414 aa15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 POLR3GLQ9BT43 218 aa15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 SRP68Q9UHB9 627 aaKnown RBP15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 USP42Q9H9J4 1324 aaKnown RBP15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 DLEC1Q9Y238 1755 aa15.34■□□□□ 0.05
CHRFAM7A-206ENST00000569278 AFDNP55196 1824 aaKnown RBP15.33■□□□□ 0.05
CHRFAM7A-206ENST00000569278 SBF1O95248 1867 aa15.33■□□□□ 0.05
CHRFAM7A-206ENST00000569278 NLGN1Q8N2Q7 840 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms