RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	ADAMTS7	Q9UKP4	1686 aa		32.64	■■■□□ 2.82
GGA2-215	ENST00000569189	UBR3	Q6ZT12	1888 aa		32.63	■■■□□ 2.81
GGA2-215	ENST00000569189	COL24A1	Q17RW2	1714 aa		32.63	■■■□□ 2.81
GGA2-215	ENST00000569189	DDX10	Q13206	875 aa	Known RBP	32.62	■■■□□ 2.81
GGA2-215	ENST00000569189	SLC16A10	Q8TF71	515 aa		32.62	■■■□□ 2.81
GGA2-215	ENST00000569189	MRC1	P22897	1456 aa		32.61	■■■□□ 2.81
GGA2-215	ENST00000569189	NFATC2IP	Q8NCF5	419 aa		32.6	■■■□□ 2.81
GGA2-215	ENST00000569189	ATP6V1A	P38606	617 aa		32.59	■■■□□ 2.81
GGA2-215	ENST00000569189	SGIP1	Q9BQI5	828 aa		32.59	■■■□□ 2.81
GGA2-215	ENST00000569189	ITPK1	Q13572	414 aa		32.58	■■■□□ 2.81
GGA2-215	ENST00000569189	LINC00116	Q8NCU8	138 aa		32.58	■■■□□ 2.81
GGA2-215	ENST00000569189	AK7	Q96M32	723 aa		32.58	■■■□□ 2.81
GGA2-215	ENST00000569189	COL5A3	P25940	1745 aa	Predicted RBP	32.57	■■■□□ 2.81
GGA2-215	ENST00000569189	RNMT	O43148	476 aa	Known RBP	32.57	■■■□□ 2.8
GGA2-215	ENST00000569189	RSPH6A	Q9H0K4	717 aa		32.57	■■■□□ 2.8
GGA2-215	ENST00000569189	LGR6	Q9HBX8	967 aa		32.57	■■■□□ 2.8
GGA2-215	ENST00000569189	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	PRKAR2B	P31323	418 aa		32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.56	■■■□□ 2.8	1e-7	■■■□□ 18.5
GGA2-215	ENST00000569189	COL23A1	Q86Y22	540 aa	Predicted RBP	32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	GAS2L2	Q8NHY3	880 aa		32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	RBM42	Q9BTD8	480 aa	Known RBP	32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	SLC52A2	Q9HAB3	445 aa		32.56	■■■□□ 2.8
GGA2-215	ENST00000569189	MSH5	O43196	834 aa		32.54	■■■□□ 2.8
GGA2-215	ENST00000569189	FLAD1	Q8NFF5	587 aa		32.54	■■■□□ 2.8
GGA2-215	ENST00000569189	MAP3K5	Q99683	1374 aa		32.54	■■■□□ 2.8
GGA2-215	ENST00000569189	SLC4A9	Q96Q91	983 aa		32.53	■■■□□ 2.8
GGA2-215	ENST00000569189	RALBP1	Q15311	655 aa		32.52	■■■□□ 2.8
GGA2-215	ENST00000569189	CIC	Q96RK0	1608 aa	Predicted RBP	32.51	■■■□□ 2.8
GGA2-215	ENST00000569189	AMIGO3	Q86WK7	504 aa		32.5	■■■□□ 2.79
GGA2-215	ENST00000569189	PHACTR3	Q96KR7	559 aa		32.5	■■■□□ 2.79
GGA2-215	ENST00000569189	TJP1	Q07157	1748 aa		32.5	■■■□□ 2.79
GGA2-215	ENST00000569189	GNAT3	A8MTJ3	354 aa		32.49	■■■□□ 2.79
GGA2-215	ENST00000569189	PTCD1	O75127	700 aa	Known RBP	32.49	■■■□□ 2.79
GGA2-215	ENST00000569189	FCHSD2	O94868	740 aa		32.49	■■■□□ 2.79
GGA2-215	ENST00000569189	ARX	Q96QS3	562 aa		32.49	■■■□□ 2.79
GGA2-215	ENST00000569189	SIPA1L3	O60292	1781 aa	Predicted RBP	32.49	■■■□□ 2.79
GGA2-215	ENST00000569189	MYH14	Q7Z406	1995 aa	Known RBP	32.47	■■■□□ 2.79
GGA2-215	ENST00000569189	GNPAT	O15228	680 aa		32.47	■■■□□ 2.79
GGA2-215	ENST00000569189	PHF14	O94880	888 aa		32.47	■■■□□ 2.79
GGA2-215	ENST00000569189	SSFA2	P28290	1259 aa		32.47	■■■□□ 2.79
GGA2-215	ENST00000569189	POLD1	P28340	1107 aa		32.47	■■■□□ 2.79
GGA2-215	ENST00000569189	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.46	■■■□□ 2.79
GGA2-215	ENST00000569189	UBR2	Q8IWV8	1755 aa		32.45	■■■□□ 2.79
GGA2-215	ENST00000569189	SMIM5	Q71RC9	77 aa		32.44	■■■□□ 2.78
GGA2-215	ENST00000569189	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.44	■■■□□ 2.78
GGA2-215	ENST00000569189	KCP	Q6ZWJ8	1503 aa		32.43	■■■□□ 2.78
GGA2-215	ENST00000569189	CNTNAP4	Q9C0A0	1308 aa		32.43	■■■□□ 2.78
GGA2-215	ENST00000569189	SLC39A6	Q13433	755 aa		32.42	■■■□□ 2.78
GGA2-215	ENST00000569189	MSL1	Q68DK7	614 aa		32.42	■■■□□ 2.78
GGA2-215	ENST00000569189	IL17RE	Q8NFR9	667 aa		32.42	■■■□□ 2.78
GGA2-215	ENST00000569189	RC3H1	Q5TC82	1133 aa	Known RBP	32.41	■■■□□ 2.78
GGA2-215	ENST00000569189	TEF	Q10587	303 aa		32.4	■■■□□ 2.78
GGA2-215	ENST00000569189	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.4	■■■□□ 2.78
GGA2-215	ENST00000569189	CEMIP	Q8WUJ3	1361 aa		32.4	■■■□□ 2.78
GGA2-215	ENST00000569189	SYT17	Q9BSW7	474 aa		32.39	■■■□□ 2.78
GGA2-215	ENST00000569189	DLG5	Q8TDM6	1919 aa		32.39	■■■□□ 2.78
GGA2-215	ENST00000569189	RTCB	Q9Y3I0	505 aa	Known RBP	32.38	■■■□□ 2.77
GGA2-215	ENST00000569189	C4A	P0C0L4	1744 aa		32.37	■■■□□ 2.77
GGA2-215	ENST00000569189	CRKL	P46109	303 aa	Known RBP	32.35	■■■□□ 2.77
GGA2-215	ENST00000569189	NEFM	P07197	916 aa		32.34	■■■□□ 2.77
GGA2-215	ENST00000569189	TTC5	Q8N0Z6	440 aa		32.34	■■■□□ 2.77
GGA2-215	ENST00000569189	RPS6KA4	O75676	772 aa		32.33	■■■□□ 2.77
GGA2-215	ENST00000569189	ADRA2B	P18089	450 aa		32.33	■■■□□ 2.77
GGA2-215	ENST00000569189	TRAPPC3L	Q5T215	181 aa		32.33	■■■□□ 2.77
GGA2-215	ENST00000569189	DNAJC10	Q8IXB1	793 aa		32.33	■■■□□ 2.77
GGA2-215	ENST00000569189	RTF1	Q92541	710 aa	Known RBP	32.33	■■■□□ 2.77
GGA2-215	ENST00000569189	KLHL34	Q8N239	644 aa		32.32	■■■□□ 2.76
GGA2-215	ENST00000569189	PLEKHF1	Q96S99	279 aa		32.31	■■■□□ 2.76
GGA2-215	ENST00000569189	DCAF8L1	A6NGE4	600 aa		32.3	■■■□□ 2.76
GGA2-215	ENST00000569189	VSIG10	Q8N0Z9	540 aa		32.3	■■■□□ 2.76
GGA2-215	ENST00000569189	PNN	Q9H307	717 aa	Known RBP	32.3	■■■□□ 2.76
GGA2-215	ENST00000569189	HTATSF1	O43719	755 aa	Known RBP	32.29	■■■□□ 2.76
GGA2-215	ENST00000569189	ZNF790	Q6PG37	636 aa		32.29	■■■□□ 2.76
GGA2-215	ENST00000569189	MCM10	Q7L590	875 aa		32.29	■■■□□ 2.76
GGA2-215	ENST00000569189	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.29	■■■□□ 2.76
GGA2-215	ENST00000569189	ARHGEF1	Q92888	912 aa	Known RBP	32.28	■■■□□ 2.76
GGA2-215	ENST00000569189	INTS5	Q6P9B9	1019 aa	Known RBP	32.27	■■■□□ 2.76
GGA2-215	ENST00000569189	CCDC87	Q9NVE4	849 aa		32.27	■■■□□ 2.76
GGA2-215	ENST00000569189	MAPK8IP3	Q9UPT6	1336 aa		32.26	■■■□□ 2.76
GGA2-215	ENST00000569189	CYP19A1	P11511	503 aa	Predicted RBP	32.26	■■■□□ 2.75
GGA2-215	ENST00000569189	BTBD11	A6QL63	1104 aa		32.25	■■■□□ 2.75
GGA2-215	ENST00000569189	RFC4	P35249	363 aa		32.25	■■■□□ 2.75
GGA2-215	ENST00000569189	DCTN1	Q14203	1278 aa		32.25	■■■□□ 2.75
GGA2-215	ENST00000569189	ZNF496	Q96IT1	587 aa	Predicted RBP	32.25	■■■□□ 2.75
GGA2-215	ENST00000569189	HEG1	Q9ULI3	1381 aa		32.24	■■■□□ 2.75
GGA2-215	ENST00000569189	NFE2L2	Q16236	605 aa		32.23	■■■□□ 2.75
GGA2-215	ENST00000569189	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.21	■■■□□ 2.75
GGA2-215	ENST00000569189	FMNL2	Q96PY5	1086 aa		32.21	■■■□□ 2.75
GGA2-215	ENST00000569189	NLGN2	Q8NFZ4	835 aa		32.2	■■■□□ 2.75
GGA2-215	ENST00000569189	SOS1	Q07889	1333 aa	Predicted RBP	32.2	■■■□□ 2.74
GGA2-215	ENST00000569189	KCNQ3	O43525	872 aa		32.19	■■■□□ 2.74
GGA2-215	ENST00000569189	GYS1	P13807	737 aa		32.19	■■■□□ 2.74
GGA2-215	ENST00000569189	NLGN1	Q8N2Q7	840 aa		32.19	■■■□□ 2.74
GGA2-215	ENST00000569189	STARD3NL	O95772	234 aa		32.18	■■■□□ 2.74
GGA2-215	ENST00000569189	ZBTB1	Q9Y2K1	713 aa		32.18	■■■□□ 2.74
GGA2-215	ENST00000569189	UTRN	P46939	3433 aa		32.17	■■■□□ 2.74
GGA2-215	ENST00000569189	MMP10	P09238	476 aa		32.17	■■■□□ 2.74
GGA2-215	ENST00000569189	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.17	■■■□□ 2.74
GGA2-215	ENST00000569189	CD2AP	Q9Y5K6	639 aa		32.17	■■■□□ 2.74

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