RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 LINC00116Q8NCU8 138 aa34.04■■■■□ 3.04
CCNF-205ENST00000569093 SMIM5Q71RC9 77 aa34.03■■■■□ 3.04
CCNF-205ENST00000569093 HMGB2P26583 209 aaKnown RBP34.02■■■■□ 3.04
CCNF-205ENST00000569093 AMIGO3Q86WK7 504 aa34.02■■■■□ 3.04
CCNF-205ENST00000569093 CFAP53Q96M91 514 aa34.02■■■■□ 3.04
CCNF-205ENST00000569093 ARXQ96QS3 562 aa34.02■■■■□ 3.04
CCNF-205ENST00000569093 LGR6Q9HBX8 967 aa34.02■■■■□ 3.04
CCNF-205ENST00000569093 SCN11AQ9UI33 1791 aa34.02■■■■□ 3.04
CCNF-205ENST00000569093 AK7Q96M32 723 aa34.01■■■■□ 3.03
CCNF-205ENST00000569093 SLC4A9Q96Q91 983 aa34.01■■■■□ 3.03
CCNF-205ENST00000569093 RBM42Q9BTD8 480 aaKnown RBP34■■■■□ 3.03
CCNF-205ENST00000569093 FHDC1Q9C0D6 1143 aaPredicted RBP34■■■■□ 3.03
CCNF-205ENST00000569093 COL24A1Q17RW2 1714 aa33.98■■■■□ 3.03
CCNF-205ENST00000569093 RNMTO43148 476 aaKnown RBP33.96■■■■□ 3.03
CCNF-205ENST00000569093 SYT17Q9BSW7 474 aa33.96■■■■□ 3.03
CCNF-205ENST00000569093 UBR3Q6ZT12 1888 aa33.96■■■■□ 3.03
CCNF-205ENST00000569093 PHF14O94880 888 aa33.95■■■■□ 3.03
CCNF-205ENST00000569093 POLD1P28340 1107 aa33.95■■■■□ 3.03
CCNF-205ENST00000569093 MSL1Q68DK7 614 aa33.95■■■■□ 3.03
CCNF-205ENST00000569093 FLAD1Q8NFF5 587 aa33.95■■■■□ 3.03
CCNF-205ENST00000569093 VIRMAQ69YN4 1812 aaKnown RBP33.95■■■■□ 3.02
CCNF-205ENST00000569093 PTCD1O75127 700 aaKnown RBP33.93■■■■□ 3.02
CCNF-205ENST00000569093 SLC52A2Q9HAB3 445 aa33.93■■■■□ 3.02
CCNF-205ENST00000569093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.92■■■■□ 3.02
CCNF-205ENST00000569093 NUDCQ9Y266 331 aa33.92■■■■□ 3.02
CCNF-205ENST00000569093 GNPATO15228 680 aa33.91■■■■□ 3.02
CCNF-205ENST00000569093 PHACTR3Q96KR7 559 aa33.9■■■■□ 3.02
CCNF-205ENST00000569093 RSPH6AQ9H0K4 717 aa33.9■■■■□ 3.02
CCNF-205ENST00000569093 ZNF831Q5JPB2 1677 aa33.9■■■■□ 3.02
CCNF-205ENST00000569093 PRKAR2BP31323 418 aa33.89■■■■□ 3.02
CCNF-205ENST00000569093 DDX10Q13206 875 aaKnown RBP33.89■■■■□ 3.02
CCNF-205ENST00000569093 U2AF1L5P0DN76 240 aaPredicted RBP33.88■■■■□ 3.01
CCNF-205ENST00000569093 U2AF1Q01081 240 aaKnown RBP eCLIP33.88■■■■□ 3.01
CCNF-205ENST00000569093 KLHL34Q8N239 644 aa33.88■■■■□ 3.01
CCNF-205ENST00000569093 ADAMTS7Q9UKP4 1686 aa33.87■■■■□ 3.01
CCNF-205ENST00000569093 SSFA2P28290 1259 aa33.87■■■■□ 3.01
CCNF-205ENST00000569093 COL5A3P25940 1745 aaPredicted RBP33.85■■■■□ 3.01
CCNF-205ENST00000569093 MRC1P22897 1456 aa33.85■■■■□ 3.01
CCNF-205ENST00000569093 SLC39A6Q13433 755 aa33.85■■■■□ 3.01
CCNF-205ENST00000569093 GAS2L2Q8NHY3 880 aa33.85■■■■□ 3.01
CCNF-205ENST00000569093 DCAF8L1A6NGE4 600 aa33.83■■■■□ 3.01
CCNF-205ENST00000569093 GNAT3A8MTJ3 354 aa33.83■■■■□ 3.01
CCNF-205ENST00000569093 IL17REQ8NFR9 667 aa33.83■■■■□ 3.01
CCNF-205ENST00000569093 MAP3K5Q99683 1374 aa33.83■■■■□ 3.01
CCNF-205ENST00000569093 RC3H1Q5TC82 1133 aaKnown RBP33.82■■■■□ 3
CCNF-205ENST00000569093 MYH14Q7Z406 1995 aaKnown RBP33.81■■■■□ 3
CCNF-205ENST00000569093 RTCBQ9Y3I0 505 aaKnown RBP33.81■■■■□ 3
CCNF-205ENST00000569093 CNTNAP4Q9C0A0 1308 aa33.79■■■■□ 3
CCNF-205ENST00000569093 TJP1Q07157 1748 aa33.79■■■■□ 3
CCNF-205ENST00000569093 FCHSD2O94868 740 aa33.79■■■■□ 3
CCNF-205ENST00000569093 TRAPPC3LQ5T215 181 aa33.78■■■■□ 3
CCNF-205ENST00000569093 RPS6KA4O75676 772 aa33.76■■■□□ 2.99
CCNF-205ENST00000569093 CRKLP46109 303 aaKnown RBP33.76■■■□□ 2.99
CCNF-205ENST00000569093 DNAJC10Q8IXB1 793 aa33.76■■■□□ 2.99
CCNF-205ENST00000569093 NLGN2Q8NFZ4 835 aa33.75■■■□□ 2.99
CCNF-205ENST00000569093 ARHGEF1Q92888 912 aaKnown RBP33.75■■■□□ 2.99
CCNF-205ENST00000569093 TEFQ10587 303 aa33.74■■■□□ 2.99
CCNF-205ENST00000569093 KCPQ6ZWJ8 1503 aa33.74■■■□□ 2.99
CCNF-205ENST00000569093 CICQ96RK0 1608 aaPredicted RBP33.72■■■□□ 2.99
CCNF-205ENST00000569093 RALBP1Q15311 655 aa33.72■■■□□ 2.99
CCNF-205ENST00000569093 INTS5Q6P9B9 1019 aaKnown RBP33.71■■■□□ 2.99
CCNF-205ENST00000569093 SIPA1L3O60292 1781 aaPredicted RBP33.7■■■□□ 2.99
CCNF-205ENST00000569093 ADRA2BP18089 450 aa33.69■■■□□ 2.98
CCNF-205ENST00000569093 CEMIPQ8WUJ3 1361 aa33.69■■■□□ 2.98
CCNF-205ENST00000569093 RFC4P35249 363 aa33.68■■■□□ 2.98
CCNF-205ENST00000569093 UBR2Q8IWV8 1755 aa33.67■■■□□ 2.98
CCNF-205ENST00000569093 CYP19A1P11511 503 aaPredicted RBP33.67■■■□□ 2.98
CCNF-205ENST00000569093 TTC5Q8N0Z6 440 aa33.67■■■□□ 2.98
CCNF-205ENST00000569093 MCM10Q7L590 875 aa33.66■■■□□ 2.98
CCNF-205ENST00000569093 ZNF790Q6PG37 636 aa33.65■■■□□ 2.98
CCNF-205ENST00000569093 CCDC87Q9NVE4 849 aa33.65■■■□□ 2.98
CCNF-205ENST00000569093 C4AP0C0L4 1744 aa33.65■■■□□ 2.98
CCNF-205ENST00000569093 MMP10P09238 476 aa33.64■■■□□ 2.98
CCNF-205ENST00000569093 GYS1P13807 737 aa33.64■■■□□ 2.98
CCNF-205ENST00000569093 DCTN1Q14203 1278 aa33.64■■■□□ 2.98
CCNF-205ENST00000569093 ZNF496Q96IT1 587 aaPredicted RBP33.64■■■□□ 2.98
CCNF-205ENST00000569093 CD2APQ9Y5K6 639 aa33.64■■■□□ 2.98
CCNF-205ENST00000569093 ZEB1P37275 1124 aaPredicted RBP33.63■■■□□ 2.97
CCNF-205ENST00000569093 GPR162Q16538 588 aa33.63■■■□□ 2.97
CCNF-205ENST00000569093 PELP1Q8IZL8 1130 aaKnown RBP33.63■■■□□ 2.97
CCNF-205ENST00000569093 VSIG10Q8N0Z9 540 aa33.63■■■□□ 2.97
CCNF-205ENST00000569093 RTF1Q92541 710 aaKnown RBP33.63■■■□□ 2.97
CCNF-205ENST00000569093 KCNQ3O43525 872 aa33.62■■■□□ 2.97
CCNF-205ENST00000569093 YY1P25490 414 aa33.62■■■□□ 2.97
CCNF-205ENST00000569093 NLGN1Q8N2Q7 840 aa33.62■■■□□ 2.97
CCNF-205ENST00000569093 PLEKHF1Q96S99 279 aa33.62■■■□□ 2.97
CCNF-205ENST00000569093 SRP68Q9UHB9 627 aaKnown RBP33.62■■■□□ 2.97
CCNF-205ENST00000569093 UTRNP46939 3433 aa33.61■■■□□ 2.97
CCNF-205ENST00000569093 BTBD11A6QL63 1104 aa33.61■■■□□ 2.97
CCNF-205ENST00000569093 ZBTB1Q9Y2K1 713 aa33.59■■■□□ 2.97
CCNF-205ENST00000569093 MYBBP1AQ9BQG0 1328 aaKnown RBP33.58■■■□□ 2.97
CCNF-205ENST00000569093 HEG1Q9ULI3 1381 aa33.58■■■□□ 2.97
CCNF-205ENST00000569093 SOS1Q07889 1333 aaPredicted RBP33.57■■■□□ 2.97
CCNF-205ENST00000569093 HTATSF1O43719 755 aaKnown RBP33.57■■■□□ 2.96
CCNF-205ENST00000569093 NEFMP07197 916 aa33.57■■■□□ 2.96
CCNF-205ENST00000569093 DLG5Q8TDM6 1919 aa33.57■■■□□ 2.96
CCNF-205ENST00000569093 USP42Q9H9J4 1324 aaKnown RBP33.56■■■□□ 2.96
CCNF-205ENST00000569093 GOLGB1Q14789 3259 aaKnown RBP33.56■■■□□ 2.96
CCNF-205ENST00000569093 FMNL2Q96PY5 1086 aa33.55■■■□□ 2.96
CCNF-205ENST00000569093 STARD3NLO95772 234 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms