RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 FHDC1Q9C0D6 1143 aaPredicted RBP28.38■■■□□ 2.13
GGA2-212ENST00000568799 TUBGCP6Q96RT7 1819 aa28.37■■■□□ 2.13
GGA2-212ENST00000568799 RBM42Q9BTD8 480 aaKnown RBP28.37■■■□□ 2.13
GGA2-212ENST00000568799 C4BP0C0L5 1744 aa28.36■■■□□ 2.13
GGA2-212ENST00000568799 SYT17Q9BSW7 474 aa28.35■■■□□ 2.13
GGA2-212ENST00000568799 TAF1LQ8IZX4 1826 aa28.35■■■□□ 2.13
GGA2-212ENST00000568799 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
GGA2-212ENST00000568799 NFATC2IPQ8NCF5 419 aa28.35■■■□□ 2.13
GGA2-212ENST00000568799 LINC00116Q8NCU8 138 aa28.35■■■□□ 2.13
GGA2-212ENST00000568799 PHF14O94880 888 aa28.34■■■□□ 2.13
GGA2-212ENST00000568799 NUDCQ9Y266 331 aa28.34■■■□□ 2.13
GGA2-212ENST00000568799 KLHL34Q8N239 644 aa28.33■■■□□ 2.13
GGA2-212ENST00000568799 PPP2R1AP30153 589 aa28.32■■■□□ 2.12
GGA2-212ENST00000568799 ITPK1Q13572 414 aa28.32■■■□□ 2.12
GGA2-212ENST00000568799 GNPATO15228 680 aa28.31■■■□□ 2.12
GGA2-212ENST00000568799 SSFA2P28290 1259 aa28.31■■■□□ 2.12
GGA2-212ENST00000568799 MTHFSDQ2M296 383 aaKnown RBP28.31■■■□□ 2.12
GGA2-212ENST00000568799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.3■■■□□ 2.12
GGA2-212ENST00000568799 MSL1Q68DK7 614 aa28.29■■■□□ 2.12
GGA2-212ENST00000568799 MAP3K5Q99683 1374 aa28.28■■■□□ 2.12
GGA2-212ENST00000568799 PTCD1O75127 700 aaKnown RBP28.28■■■□□ 2.12
GGA2-212ENST00000568799 SLC52A2Q9HAB3 445 aa28.28■■■□□ 2.12
GGA2-212ENST00000568799 RNMTO43148 476 aaKnown RBP28.27■■■□□ 2.12
GGA2-212ENST00000568799 GAS2L2Q8NHY3 880 aa28.27■■■□□ 2.12
GGA2-212ENST00000568799 LGR6Q9HBX8 967 aa28.26■■■□□ 2.12
GGA2-212ENST00000568799 RTCBQ9Y3I0 505 aaKnown RBP28.25■■■□□ 2.11
GGA2-212ENST00000568799 SCN11AQ9UI33 1791 aa28.24■■■□□ 2.11
GGA2-212ENST00000568799 U2AF1L5P0DN76 240 aaPredicted RBP28.24■■■□□ 2.11
GGA2-212ENST00000568799 U2AF1Q01081 240 aaKnown RBP eCLIP28.24■■■□□ 2.111e-7■■■□□ 18.5
GGA2-212ENST00000568799 SLC4A9Q96Q91 983 aa28.24■■■□□ 2.11
GGA2-212ENST00000568799 AMIGO3Q86WK7 504 aa28.23■■■□□ 2.11
GGA2-212ENST00000568799 COL24A1Q17RW2 1714 aa28.23■■■□□ 2.11
GGA2-212ENST00000568799 UBR3Q6ZT12 1888 aa28.22■■■□□ 2.11
GGA2-212ENST00000568799 PRKAR2BP31323 418 aa28.22■■■□□ 2.11
GGA2-212ENST00000568799 RC3H1Q5TC82 1133 aaKnown RBP28.22■■■□□ 2.11
GGA2-212ENST00000568799 SMIM5Q71RC9 77 aa28.22■■■□□ 2.11
GGA2-212ENST00000568799 ZNF831Q5JPB2 1677 aa28.22■■■□□ 2.11
GGA2-212ENST00000568799 CNTNAP4Q9C0A0 1308 aa28.21■■■□□ 2.11
GGA2-212ENST00000568799 GNAT3A8MTJ3 354 aa28.21■■■□□ 2.11
GGA2-212ENST00000568799 TRAPPC3LQ5T215 181 aa28.21■■■□□ 2.11
GGA2-212ENST00000568799 MRC1P22897 1456 aa28.19■■■□□ 2.1
GGA2-212ENST00000568799 ADRA2BP18089 450 aa28.18■■■□□ 2.1
GGA2-212ENST00000568799 TEFQ10587 303 aa28.18■■■□□ 2.1
GGA2-212ENST00000568799 RSPH6AQ9H0K4 717 aa28.18■■■□□ 2.1
GGA2-212ENST00000568799 RPS6KA4O75676 772 aa28.16■■■□□ 2.1
GGA2-212ENST00000568799 FCHSD2O94868 740 aa28.16■■■□□ 2.1
GGA2-212ENST00000568799 YY1P25490 414 aa28.16■■■□□ 2.1
GGA2-212ENST00000568799 TTC5Q8N0Z6 440 aa28.16■■■□□ 2.1
GGA2-212ENST00000568799 RFC4P35249 363 aa28.15■■■□□ 2.1
GGA2-212ENST00000568799 CRKLP46109 303 aaKnown RBP28.15■■■□□ 2.1
GGA2-212ENST00000568799 SLC39A6Q13433 755 aa28.15■■■□□ 2.1
GGA2-212ENST00000568799 GPR162Q16538 588 aa28.15■■■□□ 2.1
GGA2-212ENST00000568799 NEFMP07197 916 aa28.14■■■□□ 2.1
GGA2-212ENST00000568799 PHACTR3Q96KR7 559 aa28.14■■■□□ 2.1
GGA2-212ENST00000568799 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
GGA2-212ENST00000568799 PELP1Q8IZL8 1130 aaKnown RBP28.13■■■□□ 2.09
GGA2-212ENST00000568799 DDX10Q13206 875 aaKnown RBP28.12■■■□□ 2.09
GGA2-212ENST00000568799 NLGN2Q8NFZ4 835 aa28.12■■■□□ 2.09
GGA2-212ENST00000568799 ARHGEF1Q92888 912 aaKnown RBP28.12■■■□□ 2.09
GGA2-212ENST00000568799 CD2APQ9Y5K6 639 aa28.12■■■□□ 2.09
GGA2-212ENST00000568799 ADAMTS7Q9UKP4 1686 aa28.12■■■□□ 2.09
GGA2-212ENST00000568799 UTRNP46939 3433 aa28.12■■■□□ 2.09
GGA2-212ENST00000568799 IL17REQ8NFR9 667 aa28.11■■■□□ 2.09
GGA2-212ENST00000568799 RTF1Q92541 710 aaKnown RBP28.11■■■□□ 2.09
GGA2-212ENST00000568799 RALBP1Q15311 655 aa28.1■■■□□ 2.09
GGA2-212ENST00000568799 DNAJC10Q8IXB1 793 aa28.1■■■□□ 2.09
GGA2-212ENST00000568799 NLGN1Q8N2Q7 840 aa28.1■■■□□ 2.09
GGA2-212ENST00000568799 VSIG10Q8N0Z9 540 aa28.09■■■□□ 2.09
GGA2-212ENST00000568799 VIRMAQ69YN4 1812 aaKnown RBP28.09■■■□□ 2.09
GGA2-212ENST00000568799 CCDC87Q9NVE4 849 aa28.08■■■□□ 2.09
GGA2-212ENST00000568799 MMP10P09238 476 aa28.07■■■□□ 2.08
GGA2-212ENST00000568799 CICQ96RK0 1608 aaPredicted RBP28.07■■■□□ 2.08
GGA2-212ENST00000568799 TJP1Q07157 1748 aa28.06■■■□□ 2.08
GGA2-212ENST00000568799 KCPQ6ZWJ8 1503 aa28.05■■■□□ 2.08
GGA2-212ENST00000568799 INTS5Q6P9B9 1019 aaKnown RBP28.05■■■□□ 2.08
GGA2-212ENST00000568799 ZNF790Q6PG37 636 aa28.05■■■□□ 2.08
GGA2-212ENST00000568799 PNNQ9H307 717 aaKnown RBP28.05■■■□□ 2.08
GGA2-212ENST00000568799 CEMIPQ8WUJ3 1361 aa28.04■■■□□ 2.08
GGA2-212ENST00000568799 CYP19A1P11511 503 aaPredicted RBP28.04■■■□□ 2.08
GGA2-212ENST00000568799 GYS1P13807 737 aa28.04■■■□□ 2.08
GGA2-212ENST00000568799 MYH14Q7Z406 1995 aaKnown RBP28.04■■■□□ 2.08
GGA2-212ENST00000568799 BTBD11A6QL63 1104 aa28.03■■■□□ 2.08
GGA2-212ENST00000568799 STARD3NLO95772 234 aa28.03■■■□□ 2.08
GGA2-212ENST00000568799 ZPR1O75312 459 aa28.01■■■□□ 2.08
GGA2-212ENST00000568799 TEX13AQ9BXU3 409 aaPredicted RBP28.01■■■□□ 2.08
GGA2-212ENST00000568799 GOLGB1Q14789 3259 aaKnown RBP28.01■■■□□ 2.07
GGA2-212ENST00000568799 HTATSF1O43719 755 aaKnown RBP28.01■■■□□ 2.07
GGA2-212ENST00000568799 GRIN3BO60391 1043 aa28.01■■■□□ 2.07
GGA2-212ENST00000568799 ZNF496Q96IT1 587 aaPredicted RBP28.01■■■□□ 2.07
GGA2-212ENST00000568799 FMNL2Q96PY5 1086 aa28.01■■■□□ 2.07
GGA2-212ENST00000568799 PARP3Q9Y6F1 533 aa28.01■■■□□ 2.07
GGA2-212ENST00000568799 USP42Q9H9J4 1324 aaKnown RBP28■■■□□ 2.07
GGA2-212ENST00000568799 MCM10Q7L590 875 aa28■■■□□ 2.07
GGA2-212ENST00000568799 MAPK8IP3Q9UPT6 1336 aa27.99■■■□□ 2.07
GGA2-212ENST00000568799 SRP68Q9UHB9 627 aaKnown RBP27.99■■■□□ 2.07
GGA2-212ENST00000568799 HEG1Q9ULI3 1381 aa27.98■■■□□ 2.07
GGA2-212ENST00000568799 SOS1Q07889 1333 aaPredicted RBP27.98■■■□□ 2.07
GGA2-212ENST00000568799 ZBTB1Q9Y2K1 713 aa27.98■■■□□ 2.07
GGA2-212ENST00000568799 UBR2Q8IWV8 1755 aa27.97■■■□□ 2.07
GGA2-212ENST00000568799 MYBBP1AQ9BQG0 1328 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms