RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PRPF38BQ5VTL8 546 aaKnown RBP8.81□□□□□ -1
CDH13-211ENST00000568770 NUTM2AQ8IVF1 878 aaPredicted RBP8.81□□□□□ -1
CDH13-211ENST00000568770 ZBTB3Q9H5J0 574 aa8.81□□□□□ -1
CDH13-211ENST00000568770 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
CDH13-211ENST00000568770 CDK12Q9NYV4 1490 aaPredicted RBP8.81□□□□□ -1
CDH13-211ENST00000568770 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
CDH13-211ENST00000568770 NCOA3Q9Y6Q9 1424 aa8.8□□□□□ -1
CDH13-211ENST00000568770 NHSL1Q5SYE7 1610 aa8.8□□□□□ -1
CDH13-211ENST00000568770 NR1I2O75469 434 aa8.8□□□□□ -1
CDH13-211ENST00000568770 ATF3P18847 181 aa8.8□□□□□ -1
CDH13-211ENST00000568770 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
CDH13-211ENST00000568770 RPRD2Q5VT52 1461 aaKnown RBP8.79□□□□□ -1
CDH13-211ENST00000568770 ANKRD30AQ9BXX3 1397 aa8.79□□□□□ -1
CDH13-211ENST00000568770 TLL1O43897 1013 aa8.79□□□□□ -1
CDH13-211ENST00000568770 ZPR1O75312 459 aa8.79□□□□□ -1
CDH13-211ENST00000568770 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
CDH13-211ENST00000568770 C19orf44Q9H6X5 657 aa8.79□□□□□ -1
CDH13-211ENST00000568770 TBX22Q9Y458 520 aa8.79□□□□□ -1
CDH13-211ENST00000568770 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
CDH13-211ENST00000568770 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
CDH13-211ENST00000568770 ADAMTS13Q76LX8 1427 aa8.78□□□□□ -1
CDH13-211ENST00000568770 E9PCH4 1651 aa8.78□□□□□ -1
CDH13-211ENST00000568770 AFF2P51816 1311 aa8.78□□□□□ -1
CDH13-211ENST00000568770 ASXL1Q8IXJ9 1541 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 Q3C1V9 767 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 BRINP3Q76B58 766 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 PRR7Q8TB68 274 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 RGS12O14924 1447 aa8.77□□□□□ -1.01
CDH13-211ENST00000568770 TRPM2O94759 1503 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
CDH13-211ENST00000568770 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 SPSB2Q99619 263 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
CDH13-211ENST00000568770 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 SNRKQ9NRH2 765 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 UNC13BO14795 1591 aa8.76□□□□□ -1.01
CDH13-211ENST00000568770 XRN1Q8IZH2 1706 aaKnown RBP8.76□□□□□ -1.01
CDH13-211ENST00000568770 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
CDH13-211ENST00000568770 AP1G2O75843 785 aa8.75□□□□□ -1.01
CDH13-211ENST00000568770 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDH13-211ENST00000568770 C8orf37Q96NL8 207 aa8.75□□□□□ -1.01
CDH13-211ENST00000568770 QTRT2Q9H974 415 aaKnown RBP8.75□□□□□ -1.01
CDH13-211ENST00000568770 NRXN3Q9Y4C0 1643 aa8.75□□□□□ -1.01
CDH13-211ENST00000568770 ADGRL2O95490 1459 aa8.75□□□□□ -1.01
CDH13-211ENST00000568770 PIK3R4Q99570 1358 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 NALCNQ8IZF0 1738 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 PTPRUQ92729 1446 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
CDH13-211ENST00000568770 RBM6P78332 1123 aaKnown RBP8.74□□□□□ -1.01
CDH13-211ENST00000568770 TSC1Q92574 1164 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
CDH13-211ENST00000568770 DCCP43146 1447 aa8.73□□□□□ -1.01
CDH13-211ENST00000568770 MST1RQ04912 1400 aa8.73□□□□□ -1.01
CDH13-211ENST00000568770 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
CDH13-211ENST00000568770 LRRC59Q96AG4 307 aaKnown RBP8.73□□□□□ -1.01
CDH13-211ENST00000568770 ANKRD50Q9ULJ7 1429 aa8.72□□□□□ -1.01
CDH13-211ENST00000568770 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
CDH13-211ENST00000568770 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
CDH13-211ENST00000568770 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
CDH13-211ENST00000568770 PNPLA6Q8IY17 1366 aa8.72□□□□□ -1.01
CDH13-211ENST00000568770 MARF1Q9Y4F3 1742 aaKnown RBP8.71□□□□□ -1.01
CDH13-211ENST00000568770 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
CDH13-211ENST00000568770 ADH1BP00325 375 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 MCM6Q14566 821 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
CDH13-211ENST00000568770 TIMELESSQ9UNS1 1208 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 LAMC1P11047 1609 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 IQGAP3Q86VI3 1631 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
CDH13-211ENST00000568770 SETBP1Q9Y6X0 1596 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 ADAMTS2O95450 1211 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 KCNC4Q03721 635 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 BANK1Q8NDB2 785 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
CDH13-211ENST00000568770 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
CDH13-211ENST00000568770 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
CDH13-211ENST00000568770 S1PR4O95977 384 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 JUNDP17535 347 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 MMP16P51512 607 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
CDH13-211ENST00000568770 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 USP21Q9UK80 565 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 ADGRL3Q9HAR2 1447 aa8.68□□□□□ -1.02
CDH13-211ENST00000568770 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
CDH13-211ENST00000568770 PPEF1O14829 653 aaPredicted RBP8.67□□□□□ -1.02
CDH13-211ENST00000568770 KIF1BO60333 1816 aa8.67□□□□□ -1.02
CDH13-211ENST00000568770 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
CDH13-211ENST00000568770 METP08581 1390 aa8.67□□□□□ -1.02
CDH13-211ENST00000568770 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
CDH13-211ENST00000568770 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
CDH13-211ENST00000568770 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
CDH13-211ENST00000568770 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
CDH13-211ENST00000568770 TRPC5Q9UL62 973 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms