RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
NUP93-217ENST00000568656 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
NUP93-217ENST00000568656 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
NUP93-217ENST00000568656 RALBP1Q15311 655 aa12.47□□□□□ -0.41
NUP93-217ENST00000568656 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
NUP93-217ENST00000568656 LY75O60449 1722 aa12.46□□□□□ -0.41
NUP93-217ENST00000568656 PTGER2P43116 358 aa12.46□□□□□ -0.41
NUP93-217ENST00000568656 DCTN1Q14203 1278 aa12.46□□□□□ -0.41
NUP93-217ENST00000568656 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
NUP93-217ENST00000568656 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
NUP93-217ENST00000568656 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
NUP93-217ENST00000568656 MSH5O43196 834 aa12.45□□□□□ -0.42
NUP93-217ENST00000568656 FCHSD2O94868 740 aa12.45□□□□□ -0.42
NUP93-217ENST00000568656 PHF14O94880 888 aa12.45□□□□□ -0.42
NUP93-217ENST00000568656 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NUP93-217ENST00000568656 CASZ1Q86V15 1759 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 KCNQ3O43525 872 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 CCDC184Q52MB2 194 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 MCM10Q7L590 875 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
NUP93-217ENST00000568656 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
NUP93-217ENST00000568656 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
NUP93-217ENST00000568656 AK7Q96M32 723 aa12.42□□□□□ -0.42
NUP93-217ENST00000568656 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
NUP93-217ENST00000568656 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
NUP93-217ENST00000568656 LRP5O75197 1615 aa12.41□□□□□ -0.42
NUP93-217ENST00000568656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
NUP93-217ENST00000568656 GNPATO15228 680 aa12.41□□□□□ -0.42
NUP93-217ENST00000568656 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
NUP93-217ENST00000568656 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
NUP93-217ENST00000568656 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
NUP93-217ENST00000568656 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
NUP93-217ENST00000568656 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
NUP93-217ENST00000568656 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 SENP3-EIF4A1A0A087X0R7 540 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 TEFQ10587 303 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
NUP93-217ENST00000568656 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
NUP93-217ENST00000568656 C4BP0C0L5 1744 aa12.39□□□□□ -0.43
NUP93-217ENST00000568656 C5P01031 1676 aa12.38□□□□□ -0.43
NUP93-217ENST00000568656 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
NUP93-217ENST00000568656 CRKLP46109 303 aaKnown RBP12.38□□□□□ -0.43
NUP93-217ENST00000568656 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
NUP93-217ENST00000568656 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
NUP93-217ENST00000568656 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
NUP93-217ENST00000568656 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
NUP93-217ENST00000568656 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 ARXQ96QS3 562 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 MRC1P22897 1456 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
NUP93-217ENST00000568656 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 RPS6KA4O75676 772 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
NUP93-217ENST00000568656 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
NUP93-217ENST00000568656 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
NUP93-217ENST00000568656 SYT17Q9BSW7 474 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 SRP68Q9UHB9 627 aaKnown RBP12.36□□□□□ -0.43
NUP93-217ENST00000568656 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
NUP93-217ENST00000568656 KCPQ6ZWJ8 1503 aa12.36□□□□□ -0.43
NUP93-217ENST00000568656 SSFA2P28290 1259 aa12.35□□□□□ -0.43
NUP93-217ENST00000568656 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
NUP93-217ENST00000568656 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
NUP93-217ENST00000568656 RIPK4P57078 832 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
NUP93-217ENST00000568656 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
NUP93-217ENST00000568656 A1BGP04217 495 aa12.33□□□□□ -0.44
NUP93-217ENST00000568656 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
NUP93-217ENST00000568656 POLD1P28340 1107 aa12.33□□□□□ -0.44
NUP93-217ENST00000568656 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
NUP93-217ENST00000568656 WDR43Q15061 677 aaKnown RBP eCLIP12.33□□□□□ -0.44
NUP93-217ENST00000568656 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
NUP93-217ENST00000568656 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
NUP93-217ENST00000568656 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
NUP93-217ENST00000568656 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
NUP93-217ENST00000568656 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
NUP93-217ENST00000568656 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
NUP93-217ENST00000568656 TJP1Q07157 1748 aa12.32□□□□□ -0.44
NUP93-217ENST00000568656 NEFMP07197 916 aa12.32□□□□□ -0.44
NUP93-217ENST00000568656 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
NUP93-217ENST00000568656 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
NUP93-217ENST00000568656 MYH14Q7Z406 1995 aaKnown RBP12.31□□□□□ -0.44
NUP93-217ENST00000568656 GYS1P13807 737 aa12.31□□□□□ -0.44
NUP93-217ENST00000568656 RFC4P35249 363 aa12.31□□□□□ -0.44
NUP93-217ENST00000568656 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
NUP93-217ENST00000568656 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
NUP93-217ENST00000568656 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms