RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 NHSL1Q5SYE7 1610 aa21.12■□□□□ 0.97
COX4I1-215ENST00000568339 RGS3P49796 1198 aa21.11■□□□□ 0.97
COX4I1-215ENST00000568339 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
COX4I1-215ENST00000568339 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
COX4I1-215ENST00000568339 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
COX4I1-215ENST00000568339 ABCA3Q99758 1704 aa21.08■□□□□ 0.97
COX4I1-215ENST00000568339 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
COX4I1-215ENST00000568339 SLC4A2P04920 1241 aa21.08■□□□□ 0.97
COX4I1-215ENST00000568339 C8orf34Q49A92 452 aa21.08■□□□□ 0.97
COX4I1-215ENST00000568339 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.97
COX4I1-215ENST00000568339 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.96
COX4I1-215ENST00000568339 LGR6Q9HBX8 967 aa21.08■□□□□ 0.96
COX4I1-215ENST00000568339 HOXB7P09629 217 aa21.07■□□□□ 0.96
COX4I1-215ENST00000568339 SLC4A3P48751 1232 aa21.07■□□□□ 0.96
COX4I1-215ENST00000568339 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
COX4I1-215ENST00000568339 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
COX4I1-215ENST00000568339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.06■□□□□ 0.96
COX4I1-215ENST00000568339 RNMTO43148 476 aaKnown RBP21.06■□□□□ 0.96
COX4I1-215ENST00000568339 PKD1L3Q7Z443 1732 aa21.06■□□□□ 0.96
COX4I1-215ENST00000568339 STK31Q9BXU1 1019 aa21.06■□□□□ 0.96
COX4I1-215ENST00000568339 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
COX4I1-215ENST00000568339 CHMP4AQ9BY43 222 aa21.04■□□□□ 0.96
COX4I1-215ENST00000568339 EIF4A1P60842 406 aaKnown RBP21.03■□□□□ 0.96
COX4I1-215ENST00000568339 TEFQ10587 303 aa21.03■□□□□ 0.96
COX4I1-215ENST00000568339 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
COX4I1-215ENST00000568339 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
COX4I1-215ENST00000568339 G2E3Q7L622 706 aa21.02■□□□□ 0.96
COX4I1-215ENST00000568339 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
COX4I1-215ENST00000568339 NLRP2Q9NX02 1062 aa21.02■□□□□ 0.96
COX4I1-215ENST00000568339 MEGF6O75095 1541 aa21.02■□□□□ 0.96
COX4I1-215ENST00000568339 PXDNLA1KZ92 1463 aa21.02■□□□□ 0.95
COX4I1-215ENST00000568339 HEG1Q9ULI3 1381 aa21.01■□□□□ 0.95
COX4I1-215ENST00000568339 TATP17735 454 aaPredicted RBP21.01■□□□□ 0.95
COX4I1-215ENST00000568339 CCT4P50991 539 aaKnown RBP21.01■□□□□ 0.95
COX4I1-215ENST00000568339 NUCB1Q02818 461 aa21■□□□□ 0.95
COX4I1-215ENST00000568339 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 FLIIQ13045 1269 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 CHRNA2Q15822 529 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 SIRT2Q8IXJ6 389 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
COX4I1-215ENST00000568339 PARP4Q9UKK3 1724 aaKnown RBP20.99■□□□□ 0.95
COX4I1-215ENST00000568339 CSB-PGBD3P0DP91 1061 aa20.98■□□□□ 0.95
COX4I1-215ENST00000568339 C1orf115Q9H7X2 142 aa20.98■□□□□ 0.95
COX4I1-215ENST00000568339 MRC1P22897 1456 aa20.97■□□□□ 0.95
COX4I1-215ENST00000568339 HDGFL1Q5TGJ6 251 aa20.97■□□□□ 0.95
COX4I1-215ENST00000568339 FRAT2O75474 233 aaPredicted RBP20.97■□□□□ 0.95
COX4I1-215ENST00000568339 RPAP2Q8IXW5 612 aaPredicted RBP20.97■□□□□ 0.95
COX4I1-215ENST00000568339 KDM6AO15550 1401 aaPredicted RBP20.97■□□□□ 0.95
COX4I1-215ENST00000568339 COL5A2P05997 1499 aaPredicted RBP20.96■□□□□ 0.95
COX4I1-215ENST00000568339 PHKG2P15735 406 aa20.96■□□□□ 0.95
COX4I1-215ENST00000568339 FAM43AQ8N2R8 423 aa20.96■□□□□ 0.95
COX4I1-215ENST00000568339 WDR17Q8IZU2 1322 aa20.96■□□□□ 0.95
COX4I1-215ENST00000568339 ANKRD44Q8N8A2 993 aa20.95■□□□□ 0.95
COX4I1-215ENST00000568339 KCNQ3O43525 872 aa20.94■□□□□ 0.94
COX4I1-215ENST00000568339 CHD1LQ86WJ1 897 aa20.94■□□□□ 0.94
COX4I1-215ENST00000568339 IFNL2Q8IZJ0 200 aa20.94■□□□□ 0.94
COX4I1-215ENST00000568339 PRDM11Q9NQV5 511 aa20.94■□□□□ 0.94
COX4I1-215ENST00000568339 DAXXQ9UER7 740 aaPredicted RBP20.94■□□□□ 0.94
COX4I1-215ENST00000568339 FKBP5Q13451 457 aaPredicted RBP20.93■□□□□ 0.94
COX4I1-215ENST00000568339 F6X3S4 739 aa20.92■□□□□ 0.94
COX4I1-215ENST00000568339 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
COX4I1-215ENST00000568339 CEP85Q6P2H3 762 aa20.92■□□□□ 0.94
COX4I1-215ENST00000568339 MEIS3Q99687 375 aa20.92■□□□□ 0.94
COX4I1-215ENST00000568339 DCTPP1Q9H773 170 aa20.92■□□□□ 0.94
COX4I1-215ENST00000568339 AHDC1Q5TGY3 1603 aaPredicted RBP20.92■□□□□ 0.94
COX4I1-215ENST00000568339 SLC52A2Q9HAB3 445 aa20.92■□□□□ 0.94
COX4I1-215ENST00000568339 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
COX4I1-215ENST00000568339 HSP90AB1P08238 724 aaKnown RBP20.91■□□□□ 0.94
COX4I1-215ENST00000568339 LTBP4Q8N2S1 1624 aa20.9■□□□□ 0.94
COX4I1-215ENST00000568339 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
COX4I1-215ENST00000568339 SLC4A10Q6U841 1118 aa20.9■□□□□ 0.94
COX4I1-215ENST00000568339 NECTIN2Q92692 538 aa20.9■□□□□ 0.94
COX4I1-215ENST00000568339 COL22A1Q8NFW1 1626 aaPredicted RBP20.9■□□□□ 0.94
COX4I1-215ENST00000568339 ROBO1Q9Y6N7 1651 aa20.9■□□□□ 0.94
COX4I1-215ENST00000568339 CYP27B1O15528 508 aa20.89■□□□□ 0.93
COX4I1-215ENST00000568339 GNAI3P08754 354 aa20.88■□□□□ 0.93
COX4I1-215ENST00000568339 CARD10Q9BWT7 1032 aa20.88■□□□□ 0.93
COX4I1-215ENST00000568339 CHPF2Q9P2E5 772 aa20.88■□□□□ 0.93
COX4I1-215ENST00000568339 DBF4Q9UBU7 674 aaPredicted RBP20.88■□□□□ 0.93
COX4I1-215ENST00000568339 EIF2S2P20042 333 aaKnown RBP20.87■□□□□ 0.93
COX4I1-215ENST00000568339 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
COX4I1-215ENST00000568339 LNPKQ9C0E8 428 aa20.87■□□□□ 0.93
COX4I1-215ENST00000568339 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
COX4I1-215ENST00000568339 ZNF790Q6PG37 636 aa20.87■□□□□ 0.93
COX4I1-215ENST00000568339 SHANK3Q9BYB0 1731 aa20.87■□□□□ 0.93
COX4I1-215ENST00000568339 C5P01031 1676 aa20.86■□□□□ 0.93
COX4I1-215ENST00000568339 GNAI2P04899 355 aa20.85■□□□□ 0.93
COX4I1-215ENST00000568339 TOM1L2Q6ZVM7 507 aa20.85■□□□□ 0.93
COX4I1-215ENST00000568339 HMMRO75330 724 aa20.84■□□□□ 0.93
COX4I1-215ENST00000568339 COL14A1Q05707 1796 aaKnown RBP20.84■□□□□ 0.93
COX4I1-215ENST00000568339 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
COX4I1-215ENST00000568339 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
COX4I1-215ENST00000568339 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.92
COX4I1-215ENST00000568339 BMP2KLQ5H9B9 411 aa20.82■□□□□ 0.92
COX4I1-215ENST00000568339 SEC24BO95487 1268 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
COX4I1-215ENST00000568339 ZCRB1Q8TBF4 217 aaKnown RBP20.81■□□□□ 0.92
COX4I1-215ENST00000568339 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
COX4I1-215ENST00000568339 USP44Q9H0E7 712 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms