RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
SIN3A-210ENST00000568309 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
SIN3A-210ENST00000568309 GNPATO15228 680 aa11.49□□□□□ -0.57
SIN3A-210ENST00000568309 NME9Q86XW9 330 aa11.49□□□□□ -0.57
SIN3A-210ENST00000568309 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
SIN3A-210ENST00000568309 POTECB2RU33 542 aa11.48□□□□□ -0.57
SIN3A-210ENST00000568309 VEGFBP49765 207 aa11.48□□□□□ -0.57
SIN3A-210ENST00000568309 TMF1P82094 1093 aa11.48□□□□□ -0.57
SIN3A-210ENST00000568309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.48□□□□□ -0.57
SIN3A-210ENST00000568309 ITGB4P16144 1822 aa11.47□□□□□ -0.57
SIN3A-210ENST00000568309 RGPD2P0DJD1 1756 aa11.47□□□□□ -0.57
SIN3A-210ENST00000568309 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
SIN3A-210ENST00000568309 LOC102724428A0A0B4J2F2 783 aa11.46□□□□□ -0.57
SIN3A-210ENST00000568309 LMNB1P20700 586 aa11.46□□□□□ -0.57
SIN3A-210ENST00000568309 SIK1P57059 783 aa11.46□□□□□ -0.57
SIN3A-210ENST00000568309 RASSF7Q02833 373 aa11.46□□□□□ -0.57
SIN3A-210ENST00000568309 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
SIN3A-210ENST00000568309 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
SIN3A-210ENST00000568309 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
SIN3A-210ENST00000568309 PCDH11XQ9BZA7 1347 aa11.45□□□□□ -0.58
SIN3A-210ENST00000568309 PCDH11YQ9BZA8 1340 aa11.45□□□□□ -0.58
SIN3A-210ENST00000568309 ITPK1Q13572 414 aa11.45□□□□□ -0.58
SIN3A-210ENST00000568309 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
SIN3A-210ENST00000568309 GYS1P13807 737 aa11.44□□□□□ -0.58
SIN3A-210ENST00000568309 TRAPPC3LQ5T215 181 aa11.44□□□□□ -0.58
SIN3A-210ENST00000568309 PIGBQ92521 554 aa11.44□□□□□ -0.58
SIN3A-210ENST00000568309 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
SIN3A-210ENST00000568309 MAP2K1Q02750 393 aaPredicted RBP11.43□□□□□ -0.58
SIN3A-210ENST00000568309 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
SIN3A-210ENST00000568309 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
SIN3A-210ENST00000568309 ADRA2BP18089 450 aa11.42□□□□□ -0.58
SIN3A-210ENST00000568309 CHRNA5P30532 468 aa11.42□□□□□ -0.58
SIN3A-210ENST00000568309 HOXC9P31274 260 aa11.42□□□□□ -0.58
SIN3A-210ENST00000568309 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
SIN3A-210ENST00000568309 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
SIN3A-210ENST00000568309 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
SIN3A-210ENST00000568309 TNRC18O15417 2968 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-210ENST00000568309 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 CCDC88AQ3V6T2 1871 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 CYP27B1O15528 508 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
SIN3A-210ENST00000568309 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 NBPF6Q5VWK0 638 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 NBPF4Q96M43 638 aa11.41□□□□□ -0.58
SIN3A-210ENST00000568309 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
SIN3A-210ENST00000568309 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
SIN3A-210ENST00000568309 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
SIN3A-210ENST00000568309 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
SIN3A-210ENST00000568309 NFKBIEO00221 500 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 RFC4P35249 363 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 AMPHP49418 695 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 DDR1Q08345 913 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
SIN3A-210ENST00000568309 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 RC3H1Q5TC82 1133 aaKnown RBP11.38□□□□□ -0.59
SIN3A-210ENST00000568309 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
SIN3A-210ENST00000568309 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
SIN3A-210ENST00000568309 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
SIN3A-210ENST00000568309 ZNF831Q5JPB2 1677 aa11.37□□□□□ -0.59
SIN3A-210ENST00000568309 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
SIN3A-210ENST00000568309 LDHDQ86WU2 507 aa11.37□□□□□ -0.59
SIN3A-210ENST00000568309 MCOLN1Q9GZU1 580 aa11.37□□□□□ -0.59
SIN3A-210ENST00000568309 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
SIN3A-210ENST00000568309 KDRP35968 1356 aa11.37□□□□□ -0.59
SIN3A-210ENST00000568309 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
SIN3A-210ENST00000568309 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
SIN3A-210ENST00000568309 RPS6KA4O75676 772 aa11.36□□□□□ -0.59
SIN3A-210ENST00000568309 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
SIN3A-210ENST00000568309 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
SIN3A-210ENST00000568309 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
SIN3A-210ENST00000568309 TMOD3Q9NYL9 352 aa11.35□□□□□ -0.59
SIN3A-210ENST00000568309 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-210ENST00000568309 FKBP8Q14318 412 aa11.34□□□□□ -0.59
SIN3A-210ENST00000568309 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
SIN3A-210ENST00000568309 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
SIN3A-210ENST00000568309 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
SIN3A-210ENST00000568309 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
SIN3A-210ENST00000568309 FBLN1P23142 703 aa11.33□□□□□ -0.6
SIN3A-210ENST00000568309 ERFEQ4G0M1 354 aa11.33□□□□□ -0.6
SIN3A-210ENST00000568309 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
SIN3A-210ENST00000568309 SLC4A9Q96Q91 983 aa11.33□□□□□ -0.6
SIN3A-210ENST00000568309 SCN4AP35499 1836 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 MYH14Q7Z406 1995 aaKnown RBP11.32□□□□□ -0.6
SIN3A-210ENST00000568309 A0A1W2PP64 1363 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 IQCA1LA6NCM1 817 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-210ENST00000568309 TM4SF1P30408 202 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 COG3Q96JB2 828 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-210ENST00000568309 SRP68Q9UHB9 627 aaKnown RBP11.32□□□□□ -0.6
SIN3A-210ENST00000568309 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
SIN3A-210ENST00000568309 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
SIN3A-210ENST00000568309 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
SIN3A-210ENST00000568309 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
SIN3A-210ENST00000568309 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
SIN3A-210ENST00000568309 TERF2IPQ9NYB0 399 aa11.31□□□□□ -0.6
SIN3A-210ENST00000568309 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms