RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
HDGFL3-205ENST00000568129 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
HDGFL3-205ENST00000568129 FCHSD2O94868 740 aa11□□□□□ -0.65
HDGFL3-205ENST00000568129 SLC4A9Q96Q91 983 aa11□□□□□ -0.65
HDGFL3-205ENST00000568129 MTFR1LQ9H019 292 aa11□□□□□ -0.65
HDGFL3-205ENST00000568129 RNMTO43148 476 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 SLC52A2Q9HAB3 445 aa10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
HDGFL3-205ENST00000568129 CABP4P57796 275 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 ITPK1Q13572 414 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 TJP1Q07157 1748 aa10.98□□□□□ -0.65
HDGFL3-205ENST00000568129 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 COL23A1Q86Y22 540 aaPredicted RBP10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 LINC00116Q8NCU8 138 aa10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 PLEKHF1Q96S99 279 aa10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 TFCP2L1Q9NZI6 479 aa10.97□□□□□ -0.65
HDGFL3-205ENST00000568129 MAP3K5Q99683 1374 aa10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 ZBTB7AO95365 584 aa10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 PRKAR2BP31323 418 aa10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 ATP6V1AP38606 617 aa10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.65
HDGFL3-205ENST00000568129 KCPQ6ZWJ8 1503 aa10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 CNTNAP4Q9C0A0 1308 aa10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 SSFA2P28290 1259 aa10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-205ENST00000568129 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-205ENST00000568129 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
HDGFL3-205ENST00000568129 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-205ENST00000568129 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
HDGFL3-205ENST00000568129 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
HDGFL3-205ENST00000568129 ADRA2BP18089 450 aa10.92□□□□□ -0.66
HDGFL3-205ENST00000568129 AK7Q96M32 723 aa10.92□□□□□ -0.66
HDGFL3-205ENST00000568129 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-205ENST00000568129 KIF13BQ9NQT8 1826 aa10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 ARXQ96QS3 562 aa10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-205ENST00000568129 PTCD1O75127 700 aaKnown RBP10.9□□□□□ -0.66
HDGFL3-205ENST00000568129 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
HDGFL3-205ENST00000568129 SLC39A6Q13433 755 aa10.9□□□□□ -0.66
HDGFL3-205ENST00000568129 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
HDGFL3-205ENST00000568129 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
HDGFL3-205ENST00000568129 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.67
HDGFL3-205ENST00000568129 CHD4Q14839 1912 aa10.9□□□□□ -0.67
HDGFL3-205ENST00000568129 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 GNPATO15228 680 aa10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 POLD1P28340 1107 aa10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 TRAPPC3LQ5T215 181 aa10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 FHDC1Q9C0D6 1143 aaPredicted RBP10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
HDGFL3-205ENST00000568129 TEFQ10587 303 aa10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 DNAJC10Q8IXB1 793 aa10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 ZNF496Q96IT1 587 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 TEX13AQ9BXU3 409 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 HEG1Q9ULI3 1381 aa10.88□□□□□ -0.67
HDGFL3-205ENST00000568129 SOS1Q07889 1333 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 TAF7Q15545 349 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 MCM10Q7L590 875 aa10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 NLGN1Q8N2Q7 840 aa10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 CD2APQ9Y5K6 639 aa10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 KIAA1551Q9HCM1 1747 aa10.86□□□□□ -0.67
HDGFL3-205ENST00000568129 BTBD11A6QL63 1104 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 KCNQ3O43525 872 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 PHF14O94880 888 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 NEFMP07197 916 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 GYS1P13807 737 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 EIF5P55010 431 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 AFDNP55196 1824 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-205ENST00000568129 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 NRXN2Q9P2S2 1712 aa10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 MSH5O43196 834 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms