RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 INHAP05111 366 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 BMP2P12643 396 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 GDF10P55107 478 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 CCDC102BQ68D86 513 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 TPCN2Q8NHX9 752 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 ZMIZ1Q9ULJ6 1067 aa7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 SOS2Q07890 1332 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-212ENST00000567944 FOXD4L5Q5VV16 416 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 CNKSR1Q969H4 720 aa7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 TRIM47Q96LD4 638 aa7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
HERPUD1-212ENST00000567944 SFI1A8K8P3 1242 aa7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 EPHA4P54764 986 aa7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 DPYDQ12882 1025 aa7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 ELOAQ14241 798 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
HERPUD1-212ENST00000567944 MEN1O00255 615 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 UPP2O95045 317 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 CENPCQ03188 943 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 PSME1Q06323 249 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 SCARF1Q14162 830 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 RNF217Q8TC41 542 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 STK32AQ8WU08 396 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 NOVA2Q9UNW9 492 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-212ENST00000567944 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 ZNF295-AS1Q8N0V1 137 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 DNMT3LQ9UJW3 386 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 USP3Q9Y6I4 520 aa7.67□□□□□ -1.18
HERPUD1-212ENST00000567944 TTLL8A6PVC2 850 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 SOBPA7XYQ1 873 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 GPC1P35052 558 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 SMTNP53814 917 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 MTFR1Q15390 333 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 POLMQ9NP87 494 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 IQSEC3Q9UPP2 1182 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-212ENST00000567944 FAM181BA6NEQ2 426 aa7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 M0R2N6 131 aa7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 SEC13P55735 322 aa7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 FOXK2Q01167 660 aa7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 TMEM164Q5U3C3 297 aa7.65□□□□□ -1.18
HERPUD1-212ENST00000567944 A6NJY4 79 aa7.64□□□□□ -1.19
HERPUD1-212ENST00000567944 FIGNL2A6NMB9 653 aa7.64□□□□□ -1.19
HERPUD1-212ENST00000567944 GMPRP36959 345 aa7.64□□□□□ -1.19
HERPUD1-212ENST00000567944 NLRP3Q96P20 1036 aa7.64□□□□□ -1.19
HERPUD1-212ENST00000567944 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 LGR5O75473 907 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 TLR1Q15399 786 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 PPARGC1BQ86YN6 1023 aaKnown RBP7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 ZSCAN1Q8NBB4 408 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 SCHIP1Q9P0W5 487 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-212ENST00000567944 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
HERPUD1-212ENST00000567944 C21orf2O43822 256 aa7.62□□□□□ -1.19
HERPUD1-212ENST00000567944 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
HERPUD1-212ENST00000567944 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
HERPUD1-212ENST00000567944 ACIN1Q9UKV3 1341 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 BACH1O14867 736 aa7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 VEGFBP49765 207 aa7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 PRICKLE2Q7Z3G6 844 aa7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 GAS2L2Q8NHY3 880 aa7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 TSPAN10Q9H1Z9 355 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-212ENST00000567944 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 POU4F2Q12837 409 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 SLC27A3Q5K4L6 730 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 TBCELQ5QJ74 424 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 LYSMD3Q7Z3D4 306 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 SLC9A9Q8IVB4 645 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 NXF1Q9UBU9 619 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-212ENST00000567944 MAN1A2O60476 641 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 RHOQP17081 205 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 WEE1P30291 646 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 SUZ12Q15022 739 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 OCLNQ16625 522 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.59□□□□□ -1.193e-6■□□□□ 9.1
HERPUD1-212ENST00000567944 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 NBPF10Q6P3W6 841 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 POTEAQ6S8J7 498 aa7.59□□□□□ -1.19
HERPUD1-212ENST00000567944 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms