RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 MBIPQ9NS73 344 aa29.08■■■□□ 2.25
SPSB3-209ENST00000567868 POTEAQ6S8J7 498 aa29.07■■■□□ 2.24
SPSB3-209ENST00000567868 TSPYL4Q9UJ04 414 aa29.07■■■□□ 2.24
SPSB3-209ENST00000567868 VIRMAQ69YN4 1812 aaKnown RBP29.06■■■□□ 2.24
SPSB3-209ENST00000567868 NFATC2IPQ8NCF5 419 aa29.06■■■□□ 2.24
SPSB3-209ENST00000567868 MIS18AQ9NYP9 233 aa29.06■■■□□ 2.24
SPSB3-209ENST00000567868 BTBD11A6QL63 1104 aa29.05■■■□□ 2.24
SPSB3-209ENST00000567868 MRC1P22897 1456 aa29.04■■■□□ 2.24
SPSB3-209ENST00000567868 TMOD3Q9NYL9 352 aa29.01■■■□□ 2.23
SPSB3-209ENST00000567868 EXOSC9Q06265 439 aaKnown RBP29■■■□□ 2.23
SPSB3-209ENST00000567868 SIPA1L3O60292 1781 aaPredicted RBP28.99■■■□□ 2.23
SPSB3-209ENST00000567868 KRT27Q7Z3Y8 459 aa28.98■■■□□ 2.23
SPSB3-209ENST00000567868 TOGARAM1Q9Y4F4 1720 aa28.98■■■□□ 2.23
SPSB3-209ENST00000567868 PRIM1P49642 420 aaKnown RBP28.97■■■□□ 2.23
SPSB3-209ENST00000567868 SYTL4Q96C24 671 aaPredicted RBP28.96■■■□□ 2.23
SPSB3-209ENST00000567868 ACSBG1Q96GR2 724 aa28.96■■■□□ 2.23
SPSB3-209ENST00000567868 PIGBQ92521 554 aa28.95■■■□□ 2.23
SPSB3-209ENST00000567868 BCL9O00512 1426 aa28.95■■■□□ 2.23
SPSB3-209ENST00000567868 FAM182BQ5T319 152 aa28.94■■■□□ 2.22
SPSB3-209ENST00000567868 ZNF790Q6PG37 636 aa28.94■■■□□ 2.22
SPSB3-209ENST00000567868 KCNQ3O43525 872 aa28.94■■■□□ 2.22
SPSB3-209ENST00000567868 CT47B1P0C2W7 299 aaPredicted RBP28.94■■■□□ 2.22
SPSB3-209ENST00000567868 SLC39A6Q13433 755 aa28.94■■■□□ 2.22
SPSB3-209ENST00000567868 TTC5Q8N0Z6 440 aa28.93■■■□□ 2.22
SPSB3-209ENST00000567868 DOT1LQ8TEK3 1739 aa28.93■■■□□ 2.22
SPSB3-209ENST00000567868 KDM3BQ7LBC6 1761 aa28.92■■■□□ 2.22
SPSB3-209ENST00000567868 EIF4A1P60842 406 aaKnown RBP28.92■■■□□ 2.22
SPSB3-209ENST00000567868 C8orf58Q8NAV2 365 aa28.92■■■□□ 2.22
SPSB3-209ENST00000567868 RGS12O14924 1447 aa28.92■■■□□ 2.22
SPSB3-209ENST00000567868 BRWD3Q6RI45 1802 aa28.92■■■□□ 2.22
SPSB3-209ENST00000567868 ITGB4P16144 1822 aa28.91■■■□□ 2.22
SPSB3-209ENST00000567868 ELL2O00472 640 aaPredicted RBP28.9■■■□□ 2.22
SPSB3-209ENST00000567868 TWISTNBQ3B726 338 aaPredicted RBP28.9■■■□□ 2.22
SPSB3-209ENST00000567868 FAM196AQ6ZSG2 479 aa28.9■■■□□ 2.22
SPSB3-209ENST00000567868 TSPYL6Q8N831 410 aa28.9■■■□□ 2.22
SPSB3-209ENST00000567868 KAT6BQ8WYB5 2073 aa28.89■■■□□ 2.22
SPSB3-209ENST00000567868 KRT24Q2M2I5 525 aa28.89■■■□□ 2.22
SPSB3-209ENST00000567868 RCAN3Q9UKA8 241 aa28.88■■■□□ 2.21
SPSB3-209ENST00000567868 KCNQ2O43526 872 aa28.87■■■□□ 2.21
SPSB3-209ENST00000567868 VAMP4O75379 141 aa28.87■■■□□ 2.21
SPSB3-209ENST00000567868 ATG3Q9NT62 314 aa28.87■■■□□ 2.21
SPSB3-209ENST00000567868 SOS1Q07889 1333 aaPredicted RBP28.86■■■□□ 2.21
SPSB3-209ENST00000567868 FMNL2Q96PY5 1086 aa28.86■■■□□ 2.21
SPSB3-209ENST00000567868 ASAP1Q9ULH1 1129 aa28.86■■■□□ 2.21
SPSB3-209ENST00000567868 ZNF428Q96B54 188 aa28.85■■■□□ 2.21
SPSB3-209ENST00000567868 ZNF496Q96IT1 587 aaPredicted RBP28.85■■■□□ 2.21
SPSB3-209ENST00000567868 HEG1Q9ULI3 1381 aa28.84■■■□□ 2.21
SPSB3-209ENST00000567868 HOXB7P09629 217 aa28.83■■■□□ 2.21
SPSB3-209ENST00000567868 PAPPAQ13219 1627 aa28.82■■■□□ 2.2
SPSB3-209ENST00000567868 GIGYF1O75420 1035 aaPredicted RBP28.82■■■□□ 2.2
SPSB3-209ENST00000567868 PTCD1O75127 700 aaKnown RBP28.8■■■□□ 2.2
SPSB3-209ENST00000567868 RARSP54136 660 aaKnown RBP28.8■■■□□ 2.2
SPSB3-209ENST00000567868 SMARCC1Q92922 1105 aaPredicted RBP28.8■■■□□ 2.2
SPSB3-209ENST00000567868 CHMP4AQ9BY43 222 aa28.8■■■□□ 2.2
SPSB3-209ENST00000567868 NHSQ6T4R5 1651 aa28.8■■■□□ 2.2
SPSB3-209ENST00000567868 SNRPA1P09661 255 aaKnown RBP28.8■■■□□ 2.2
SPSB3-209ENST00000567868 BCL11BQ9C0K0 894 aaPredicted RBP28.8■■■□□ 2.2
SPSB3-209ENST00000567868 ALDH1L2Q3SY69 923 aa28.78■■■□□ 2.2
SPSB3-209ENST00000567868 PTF1AQ7RTS3 328 aa28.78■■■□□ 2.2
SPSB3-209ENST00000567868 KCPQ6ZWJ8 1503 aa28.78■■■□□ 2.2
SPSB3-209ENST00000567868 SBF2Q86WG5 1849 aa28.77■■■□□ 2.2
SPSB3-209ENST00000567868 RBM42Q9BTD8 480 aaKnown RBP28.77■■■□□ 2.2
SPSB3-209ENST00000567868 UBR2Q8IWV8 1755 aa28.77■■■□□ 2.2
SPSB3-209ENST00000567868 VSIG10Q8N0Z9 540 aa28.76■■■□□ 2.19
SPSB3-209ENST00000567868 SSH1Q8WYL5 1049 aa28.76■■■□□ 2.19
SPSB3-209ENST00000567868 SUPT16HQ9Y5B9 1047 aaKnown RBP28.76■■■□□ 2.19
SPSB3-209ENST00000567868 HDGFL1Q5TGJ6 251 aa28.75■■■□□ 2.19
SPSB3-209ENST00000567868 CCDC30Q5VVM6 783 aa28.75■■■□□ 2.19
SPSB3-209ENST00000567868 PRAMEF22A3QJZ6 481 aa28.74■■■□□ 2.19
SPSB3-209ENST00000567868 BCAR3O75815 825 aa28.74■■■□□ 2.19
SPSB3-209ENST00000567868 EIF2S2P20042 333 aaKnown RBP28.74■■■□□ 2.19
SPSB3-209ENST00000567868 SMC4Q9NTJ3 1288 aa28.74■■■□□ 2.19
SPSB3-209ENST00000567868 TRIM37O94972 964 aa28.73■■■□□ 2.19
SPSB3-209ENST00000567868 PALLDQ8WX93 1383 aa28.73■■■□□ 2.19
SPSB3-209ENST00000567868 BCL2L13Q9BXK5 485 aa28.72■■■□□ 2.19
SPSB3-209ENST00000567868 TEX13AQ9BXU3 409 aaPredicted RBP28.72■■■□□ 2.19
SPSB3-209ENST00000567868 TCERG1O14776 1098 aaKnown RBP28.71■■■□□ 2.19
SPSB3-209ENST00000567868 NECTIN2Q92692 538 aa28.71■■■□□ 2.19
SPSB3-209ENST00000567868 STK31Q9BXU1 1019 aa28.71■■■□□ 2.19
SPSB3-209ENST00000567868 USP16Q9Y5T5 823 aa28.71■■■□□ 2.19
SPSB3-209ENST00000567868 BTAF1O14981 1849 aa28.71■■■□□ 2.19
SPSB3-209ENST00000567868 LOC102724428A0A0B4J2F2 783 aa28.69■■■□□ 2.18
SPSB3-209ENST00000567868 SIK1P57059 783 aa28.69■■■□□ 2.18
SPSB3-209ENST00000567868 MRPL50Q8N5N7 158 aaKnown RBP28.69■■■□□ 2.18
SPSB3-209ENST00000567868 BRPF1P55201 1214 aaPredicted RBP28.69■■■□□ 2.18
SPSB3-209ENST00000567868 SLC4A9Q96Q91 983 aa28.69■■■□□ 2.18
SPSB3-209ENST00000567868 SLC4A2P04920 1241 aa28.67■■■□□ 2.18
SPSB3-209ENST00000567868 DNAJC10Q8IXB1 793 aa28.67■■■□□ 2.18
SPSB3-209ENST00000567868 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.67■■■□□ 2.18
SPSB3-209ENST00000567868 RNF123Q5XPI4 1314 aa28.67■■■□□ 2.18
SPSB3-209ENST00000567868 ATP6V1AP38606 617 aa28.66■■■□□ 2.18
SPSB3-209ENST00000567868 C5P01031 1676 aa28.66■■■□□ 2.18
SPSB3-209ENST00000567868 DBF4Q9UBU7 674 aaPredicted RBP28.65■■■□□ 2.18
SPSB3-209ENST00000567868 STARD3NLO95772 234 aa28.65■■■□□ 2.18
SPSB3-209ENST00000567868 RRP1P56182 461 aaKnown RBP28.65■■■□□ 2.18
SPSB3-209ENST00000567868 CHPF2Q9P2E5 772 aa28.64■■■□□ 2.18
SPSB3-209ENST00000567868 KIF16BQ96L93 1317 aa28.64■■■□□ 2.17
SPSB3-209ENST00000567868 FRAT1Q92837 279 aaPredicted RBP28.63■■■□□ 2.17
SPSB3-209ENST00000567868 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
SPSB3-209ENST00000567868 DDX21Q9NR30 783 aaKnown RBP eCLIP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms